Trichomycterus rosablanca: 134333790
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Entry
134333790 CDS
T09921
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134333790 (tfip11)
Spliceosome [BR:
trn03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134333790 (tfip11)
Other components
Complex C specific factors
134333790 (tfip11)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
134333790
NCBI-ProteinID:
XP_062872018
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Position
19:complement(19658651..19667621)
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AA seq
836 aa
AA seq
DB search
MSMSHLYGRRGDEENDGVEIENFEISEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSDD
ERPSFGGKRSKDYTAPVNFISGGLKKTAAEEKQKGSDDSDDENEEVPPPPRATAPKNLQT
GGNFKTSQRTFAGNIRPGQDLGGWEKHTKGIGQKLLQKMGYVPGKGLGKNAQGILNPIEA
KVRKGKGAVGAYGNERTQQSVQDFPVVDSEEDEEKEFQRELGQWRKEPGAGKKKPKYSFK
TVEDLKVHGKITSTSMTKPAGELAQVKVIDMTGREQKVYYSYSQMSKKHNIPEEAPMSAS
AQEQKSSRFVLPELEHNLKLLIELTEQDILQSARRLQHEKDTVVTLKHESTALQSRLSEE
TEALERLEGMLELVDRLESAREGGDPPLSLDECAQAFQELQTNFYNEYKAMGVSDLAVSV
VHPLLNEKLKIWEPLKDCSYGLEEVGQWRAILENTQLFHSAPDATQMDPYHRLVWEVWVP
VMRNCVPQWQPRIVGPMVDLVDCWAPVLPHWILDYMLDQLIFPRLQKEVDNWNPLTDTVP
IHSWIHPWLPLMQVRLEPLYPPIRSKLANALQRWHPSDPSARLILQPWKDVFTPGAWEAF
MVKNIVPKLALSLGELVVNPHQQVIEPFNWVMDWEGMLSLSTMVGLLDKHFFNKWLQVLC
SWLSNNPNYEEITKWYLGWKSMFSEQLLSQLVVKEKLNEALDIMNRAVASGIGGYMQPGA
KENIAYLTQTERRKDFQYKPPAPAAAPPQHEVEASIPRMPGSSLLTSVPTNFKDLIQAKA
EENGIVFIPLVGKRHMGKQLYTFGRIVIYVERGVVFVQGKKTWVPTSLQSLIDMAK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatctttatgggcgtagaggagatgaggagaatgatggagtggaaatt
gagaatttcgagatctctgaatgggacttggccaacgagttcaatccagacagacgtcgt
cacagacagaccaaagaagaggcaacatatggcatatgggctgaacacgattctgatgac
gagagaccaagctttggaggcaagagatctaaagactacacagctccagtgaactttatc
agtggtggtctgaagaagactgcagctgaagagaagcaaaaaggctcagatgattccgac
gatgagaatgaagaagtgcctccaccaccccgtgctactgcacccaaaaatcttcagacg
ggtgggaacttcaagacatcccagagaacatttgcaggcaacataaggccaggtcaggac
cttggtggctgggagaaacacacaaaaggcattggccaaaagctcttacagaagatgggc
tacgtcccaggcaaaggcctgggcaaaaatgcacagggtattttaaacccaattgaggcc
aaggtgcggaagggcaaaggagcagtgggtgcttatggaaatgaaagaactcagcagtca
gtgcaagatttcccagtggtggactctgaggaggacgaggagaaggagtttcaaagggag
ttggggcagtggcgcaaagaaccaggagcaggaaagaaaaagcccaaatattcattcaaa
actgtggaggatcttaaagttcatggaaaaatcaccagcacaagcatgaccaaaccagct
ggagaactcgcccaggtcaaggttatagatatgacaggtcgggagcagaaggtttactac
agctacagccagatgagtaagaagcacaatattcctgaggaggctcctatgagtgcgagt
gcgcaggaacagaaaagctccagatttgtcctgcctgaattagaacacaacctcaagctt
ctcatcgagctcaccgagcaggatattttacagagtgctcggcgtttgcagcacgagaag
gatacagtagtgactctgaagcacgagagcacagccctgcagtcgaggctaagcgaagag
accgaggctctggagcgactagagggcatgctagagttggtggaccgtctggagtcagct
agagaagggggcgacccaccactcagccttgacgaatgtgcccaggccttccaggagttg
cagacgaacttctacaacgagtacaaggcaatgggtgtgtctgacctcgcagtgtccgtg
gtacacccacttctgaatgaaaaacttaaaatctgggaacctttgaaggactgttcatat
ggtttagaagaggtgggtcagtggagggccattctagagaatacgcagctttttcatagc
gcccctgatgccacccaaatggacccctatcacaggttggtatgggaggtctgggttcca
gtgatgagaaactgtgtgcctcagtggcaaccaaggatcgtaggacctatggtggacctg
gtagactgttgggcccctgtgctgcctcactggattttagattacatgctggatcagctc
atttttccacggctacagaaagaggtggataactggaacccgctgacagacacggtgccc
atccactcctggattcacccatggctgcctctgatgcaggtgcgcctggagcccctgtac
ccgccaatacgcagcaaactagcaaacgctctgcagcgctggcaccccagcgacccctca
gcccgccttatcctccagccttggaaagatgtctttactcccggagcctgggaggccttc
atggtcaagaacattgtccccaagttagctttaagtcttggagagctggtggtgaatccc
catcagcaagtgatcgaaccatttaactgggtaatggactgggaggggatgctttctctc
tcaactatggtgggattactagacaagcacttcttcaacaaatggttacaggtgttgtgc
tcatggctgagtaacaatccgaactacgaagagatcaccaagtggtatctgggctggaag
agcatgttctcagagcaactgcttagccagctggtcgttaaagaaaagctcaatgaggcc
ctggacatcatgaatagagctgtagcctccggaataggtggctacatgcagcctggagcc
aaggaaaacatcgcctatctgactcagacagagagaagaaaggacttccagtataagcca
ccagctccagcagcagcaccgccacagcacgaagtcgaggccagcatcccacgcatgccg
ggcagcagccttctaacctcagtgccaaccaacttcaaagatttgatccaggcgaaagca
gaagagaacggcattgtcttcattcctctggtgggcaagaggcacatgggaaagcagcta
tacacgtttggcaggatcgttatctatgtggagagaggagtggtgtttgtccagggtaaa
aagacatgggtacccacatcattacagagtctcatcgatatggccaagtga
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