Trichomycterus rosablanca: 134333854
Help
Entry
134333854 CDS
T09921
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134333854
04121 Ubiquitin system [BR:
trn04121
]
134333854
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
134333854
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
134333854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DBD_Tnp_Hermes
LptD_2
RNase_3_N
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
134333854
NCBI-ProteinID:
XP_062872093
LinkDB
All DBs
Position
19:6123840..6126086
Genome browser
AA seq
573 aa
AA seq
DB search
MEPPRKRRTSPVWEHFELFAQNKVRCLLCHKELTYSNNTSSMIRHYRAIHDHAQSAASGP
DTSQNSRKKIVDDALVNMVIKDSQPFSIVEDVGFKELIHVLEPTYVLPTRQALKAMVDKQ
YEEAKEKAKKTLQKVMSVSLTSDMWTSINMEAYLAVTCHFIDEEDQLGTILLGVEHFPST
HTAENLAMAHSRFMEEWGIKDKTKCIVTDAAANMIACVNNLNVRHALCVAHNLNLIVKKS
FEEVPGLSELRAKCRKMVTYFRTSTTAKETLTQVQKQMGLPSLKMILEVDTRWNSTYLML
ERLYNLREPVGAALASLRTEITPPTSLEYEIIKETIQVLGAFQQATIELSGEKWVSASKV
IPMLKMLSHTTQNKTKSLTSSMARQLGANLVRRVIDRSLKAEAITVRTMPTLLDPRFKKL
GFLSSTKLEEAITRLKGNCAEIIRNTPSSTPLQLQEAIQTDQSSDSGDLWHLLDSNVGQS
RQNSSAIVDATIEVDRYLSEVNLPRQEYPLMYWSKHKYIYPHLYKLAQMFLCIPASSVPC
ERVFSKAGEIVSKKRNRLNPNTVKKLIFLNKNQ
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggagccacccagaaagaggaggacttctcctgtctgggaacattttgaattgtttgct
caaaacaaggtaaggtgcttgctgtgtcataaggagctcacttacagcaacaacacatcc
tccatgataaggcattacagagcaatacatgatcatgcacagtctgctgccagtggtcca
gacaccagtcaaaattccagaaagaaaatagtggatgatgccctggtcaatatggtcatc
aaagactcacaacccttttccattgtggaagatgtgggctttaaggaattaattcatgta
ctggaaccgacatatgttctaccaaccagacaggctctaaaggcaatggtggacaagcag
tatgaggaggctaaggagaaggccaagaagacactgcaaaaagtcatgtctgtcagcctt
acatctgacatgtggacttcaatcaatatggaagcataccttgcagtcacttgtcatttc
attgatgaagaggaccagctagggacaattttgcttggggtagagcattttccaagtacc
catactgcagagaacctagcaatggctcattcaagattcatggaggagtggggcataaag
gacaaaactaaatgtatagtgacagatgctgcagccaacatgattgcttgtgttaacaat
ttaaatgttagacatgctctatgtgtcgctcacaatctaaatcttatagtaaaaaagtcc
tttgaagaagtaccaggcctgtctgagttgagggcaaaatgtcgcaaaatggttacttat
tttagaaccagcacgactgccaaggaaacattgacgcaggtacaaaagcagatgggcctc
ccatctcttaaaatgatattagaagtggacaccaggtggaacagcacatatctcatgctg
gagcgcctgtataaccttagagagccagttggagcagctctggcctctctaaggactgaa
ataacccctccaacatctctggaatatgaaataattaaagagacaattcaggttcttggt
gcatttcagcaggctaccatagagctgtcaggggagaaatgggtaagtgcatccaaggta
ataccaatgctcaagatgctaagccacactacccagaacaagactaagagcttgacctcg
agcatggcaaggcaacttggagcgaatctggtacgccgggtaatagaccgctctttaaag
gcagaggcaataactgtcaggaccatgccaactctgctggatccgaggtttaaaaagctg
ggattcttgagctccactaaattggaagaagctataacaaggttaaaagggaattgtgct
gaaatcatcagaaacactccctcatcaaccccccttcagctacaagaggccatacaaaca
gaccaatcatctgacagtggtgacctttggcatttgctagactccaatgtgggacagagc
aggcagaattcgagtgcaatagttgatgcaaccattgaagttgacagatacttatctgaa
gtaaacctgcccagacaagaatatccactcatgtactggagcaaacataaatatatatat
ccacatttatataagttggcacaaatgtttttatgcattccagcctcctcagtgccatgt
gaaagggtattctctaaggctggggagattgtatccaaaaaaaggaatcgcctaaacccc
aacactgttaaaaagcttatatttttaaataaaaatcaataa
DBGET
integrated database retrieval system
