Trichomycterus rosablanca: 134334008
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Entry
134334008 CDS
T09921
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
trn
Trichomycterus rosablanca
Pathway
trn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134334008 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134334008 (mlh3)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134334008 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
HATPase_c
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
134334008
NCBI-ProteinID:
XP_062872268
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Position
19:complement(22705590..22714830)
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AA seq
1197 aa
AA seq
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MIKSLSREVQAQLRSGIAIFSLQQCVEELVLNSIDAGATCVAVKIDIEACKVQVIDNGSG
MDRENMEKVGIRYCTSKCSSLEDLDNLCFHGFRGEAIASMVTLATMVEVSSRTKLSIKTF
VKRFNEGKASEVFEAQTTRPSSGTTVLICNFFHNMPVRRKRMDSVLEVERVRQRVEAISL
MHSSVSFTVKKDCSGILLVQLPKARNTYYRFVQIHGFGKAQKLREVNHTYGKFQMMGYIA
CEGHYNNSLQYLFVNSRLLLKTRIHKLFNCLLKRLSSSNGKTNSPNASPVILSPKQRGGP
DLHGVYIINLKCPYSEYDVCLEPAKSLIEFKDWDDVLFCIEEGIKSFLVKENLVSECSVS
DVQNLGSGFTNQESSPIRNVEMSESENFKEGFKETGSSVVAENTDYNVQTVEQELESAAL
NLQSEQCSDSDLESKVQVNVTDKPLPNSFISGTENKEKDDKMIEDYYENVLSTDVSEFPV
CVNNNNLHFENAKSRIALTGHEEAYDSLKRFAEPYLNTAPKRKLSLLSSDNQTGGCDQRN
RPKIPRVTPSRKLTLSFETGSLDKFKRMFENEIKPQAMNTQLKDGLCPEVSVDSSLVANA
ASSSLLISEDAQVDFNECSTSLMNDSLLITKQTKTKNSTSASKRKKISLAAKLSHKVDAA
KPQQCELNAQNDSVSKTLSDFAERFTDFLSDQCMLENNQELLPHSASNEITETAGPLENY
PSDEPRVTAPHRQDVSTPTSTLITGGTKLTENMTSLDPESASGQMLYPLSQHDPLPTKAG
NEEQTANENQGHEGDKRKLSSSGWLTHYDNVLGKLVHINQVTGLSKYDNPLLEETSVPCT
TDVTNMAISVVSSTGFEYRCYPFQTKLVLPFLPKPRAERVLSSSINCEDPDEGPSSLSTL
FSKWNNPVFVRPPQVAMDVSSGQAEDLAVKVHNILFPYRFTKDMIHSMKVINQVDKKFLA
CLINTTGKETTGSSKGEENLLVLVDQHAAHERVRLEGLVTESYEDSPDTPGKKRLCSSSV
SPPLEINVTEEEMRLLRLYQSFLRDMALEISFPVTEKSYVLLKRLPACFIEKENTEKRRG
RRSVIKSIAEEYLREHIEFLHSTGRVRGTLPLTVHNVLASQACHGAIKFNDDLSTEECFS
LVAALSSCHLPFQCAHGRPSILPLADLLHLNTEQEFPKPNLRKLRRMYKAWQLYGNN
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagtctgtcacgagaagttcaggcccagttgcgctctggaattgccattttc
tcactgcagcaatgtgtggaggagcttgtgctgaacagcatcgatgccggagcaacatgt
gtcgctgtgaagatagacatagaggcctgcaaagttcaggtgatagacaatggctcgggc
atggatcgggagaacatggagaaggtcgggatcagatactgcacaagcaaatgcagttca
ctggaggatttggataacttgtgctttcatggattcagaggtgaagcaattgcaagcatg
gtcactcttgcaaccatggtggaagtctcatctcggactaaactgtccattaaaacattt
gttaagaggtttaacgaaggtaaagcttcagaggttttcgaggcgcagactactcgacct
tcatctgggactacagtgctcatctgtaatttctttcacaacatgccggtcaggagaaaa
aggatggactctgtactggaagtagagcgcgttcgccagagagtggaagccatatccctg
atgcattcgtctgtgtcttttacagtgaagaaagattgttcaggcattctgctggtgcag
cttcccaaagcccggaacacttattatagatttgttcagatccatggtttcggaaaggct
caaaagctcagagaggtaaatcacacctatggaaagtttcagatgatgggatatattgca
tgtgagggtcattacaacaacagcctccagtacctttttgtgaacagtcgacttctttta
aaaacacgaattcacaaactgttcaactgccttcttaagagattgagcagttcaaatggg
aaaacaaacagtcccaacgcatctcctgtcattttaagccctaagcaacgaggtggacca
gatttacatggagtttacatcattaacttgaagtgcccttattcagagtatgatgtatgc
ttggagccggccaagagtcttatagaattcaaggattgggatgatgtacttttctgcatc
gaggaaggcataaaatcattccttgtgaaggagaacttggtatctgaatgttctgtcagt
gatgtccaaaatttagggagtggatttactaatcaagaaagcagtccaattagaaatgta
gagatgtcagagtctgaaaactttaaagaaggctttaaagagacaggaagctcagtagtg
gctgagaacacagattacaatgtacaaactgtagaacaggagcttgaatcagctgcttta
aatttgcaatccgagcaatgttcagattcagatcttgaatccaaagttcaggtcaatgtc
actgacaaaccattgccgaacagtttcatttctggaactgaaaataaagagaaagatgac
aaaatgattgaagattattatgaaaatgtactgtccactgatgtgagtgaatttccagtc
tgtgttaacaataataatttacattttgaaaatgcaaaatccaggattgccctaactggg
catgaagaggcctatgatagtttaaaaagatttgctgaaccctatttaaacactgcacca
aagagaaagctgtctctactctcttcagataatcagactggtggctgcgaccaaaggaat
aggccaaagattccaagggtcacaccaagtcgcaaattaactctgtcgtttgaaacagga
tctcttgacaaattcaagagaatgtttgagaatgaaataaaaccccaagctatgaacaca
caactcaaagatggtttatgtcctgaagtttctgttgattcctccttagttgctaatgct
gcaagcagcagtttgctcatttccgaggacgcacaagtagattttaatgaatgtagtact
tcattaatgaatgattcacttttgattaccaaacagaccaagactaaaaattctacctca
gcctccaaaaggaagaaaatatcattagctgccaaactctcgcacaaggtagatgccgct
aaaccacagcaatgtgaacttaatgcacaaaacgactccgtttccaaaactttgtcagac
tttgcagagaggtttacagattttctctctgatcagtgtatgttagagaacaatcaagag
cttttacctcatagtgcttcaaatgagatcacagaaacagctgggccgctcgagaattac
ccctcagatgaacccagagtcaccgcaccccacagacaggacgtctcaacacccacctcc
actctcatcactggaggaactaagctcactgaaaatatgacttcccttgatccagaaagc
gcctcaggtcaaatgctttaccctttatcacaacatgacccattgcccaccaaagcagga
aatgaggaacagactgcaaatgaaaaccagggtcacgagggcgacaagaggaagcttagc
tcgagtggctggctaacacattatgataacgtgttgggaaagttggtccacatcaatcag
gtgacgggactcagtaaatacgataatccattgttggaggaaacttcagtgccttgtacc
acggatgtcactaatatggcaatcagcgttgtttcatcaacaggatttgagtacaggtgc
tacccatttcagacaaagcttgtattgccctttcttcccaaacctagagcagagagagtg
cttagttcaagcataaactgtgaagatccggatgagggtcccagttcattatcgactctc
ttctctaaatggaataaccctgtgtttgtacgaccaccacaggttgctatggatgtgtca
agtggtcaagccgaagaccttgctgttaaagtccataacattctctttccttaccgcttc
actaaagacatgatccactctatgaaggttattaatcaagtggacaagaaatttcttgcc
tgtctcataaatacaacaggcaaagagaccacagggagcagtaaaggtgaagaaaacctt
ctggtgttggttgatcaacatgctgctcatgaacgggttcgtctggaggggctcgtaaca
gagtcttatgaggacagcccagatacaccgggtaaaaagagactgtgttcctcgagtgtt
agcccccctctagagattaacgtgaccgaagaggagatgagacttttaaggttgtatcag
tctttcctaagagacatggctttagaaataagctttcctgtgacagagaagtcctatgtt
ctactgaagcgacttcccgcgtgtttcatagagaaggagaacactgagaaacgaagagga
agacgaagtgttatcaagtctattgcagaggaatacttgcgggaacacattgagttttta
cactcaacaggaagagtaagaggcactttgcctttaacagttcacaatgttctcgcttca
caggcttgtcatggtgctattaagtttaacgatgatttaagtacagaggagtgcttcagc
ttggtggcggccctctcatcctgtcatctacccttccagtgtgcccatggacggccctcc
attctccctctagctgaccttctccacttaaacactgaacaggaatttcccaaaccaaat
ctcaggaaattaagaagaatgtacaaagcatggcaactgtatggaaataattaa
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