Trichomycterus rosablanca: 134334069
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Entry
134334069 CDS
T09921
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134334069 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134334069 (u2surp)
Spliceosome [BR:
trn03041
]
Complex A
U2 snRNP components
U2 related factors
134334069 (u2surp)
Complex B
134334069 (u2surp)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
134334069
NCBI-ProteinID:
XP_062872308
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Position
20:complement(76235..92556)
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AA seq
973 aa
AA seq
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MLSLTESKMADRTPGGTPKSSSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKQDER
AAAEIYEEFLAAFEGGDGRVKTFVRGGLTNATKDEAAVDDKRGKLYKPKSRILETKPVPP
PEPPALFVPLDKRNVSKKSDKEKKKSNLELFKEELKQIQEERDERHKSKGRVSRFEPLPN
TEGRKSLLDDSAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRT
DEERARDRNCGFVAFMMRKDAERALKHLNGKMVMNFEMKLGWGKGVPIPPHPIYIPPSLM
EHTLPPPPSGLPFNAQPKERLKNPTVPMPPPPKSKEEFEKTLSQAIVKVVIPTERNLLCL
IHRMIEFVVREGPMFEAMIMNKEINNPLYRFLFENQSPAHVYYRWKLYTILQGDSPNKWR
TEDFRLFKNGSLWRPPPLNPYLHSTAEEEQEKEKEKEKENGEEETKQKGSLKDDERDKLE
ELLRSLTPRRNDIAEAMSFCLSHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLF
NSSAKVANASYYRKFFEIKLCQMFSDLNATYRAIQGHLQSEQFKQRVMSCFRAWEDWTVY
PDPFLIKLQNIFLGLITLDQDNEPEVPKQVEKVEDLDGAPIMEEEEEEEELDGAPLEDVD
GAPLDGAPLDGAPLDDLDGVPIRSTEEELDGVPLRGAKAGFKMAPSKWEEVDGPALEAQA
VTTSKWEVFDLPEESDKNNERDSHELDRKEKEKSSYLQEQPLPPQTVKEEQHESKSNKLS
EMSEEKRAKLREIELKVMKFQDELESGKRPKKSGQSIQEQVEVYREKLLLREKEKEVDKD
KEKEKEKKEKEKSDNTHRDKEEPPSSSSRKEKKRRHSPSPSPSRSGSSVRRVRSPSPRSE
RSDRSHTKESSRTSYRDSPRESRKSSKRSPSPIATPKRSRRSRSRTPKKSSKKSRSRSRS
PHRSHKKSKKSKH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccttacagagagcaaaatggcggaccgaacaccaggcgggactccgaagtcc
agctccaaggcgctgttggagagtaaattaaaagccttcagtattgggaagatggctgtg
gctaaaagaactctcagtaagaaagaacaagatgaactaaagaagaagcaggatgaaaga
gcagcagcagaaatttatgaagaattcctggcagcgtttgaggggggagatggcagagtc
aaaacgtttgtacgaggaggactcaccaacgccaccaaagatgaagctgcagtcgatgat
aagagaggaaaactctacaaaccgaaatctagaattttagagacaaaacctgttcctccc
ccggaacctcctgcactgtttgttcctttagataagcgcaatgtttctaagaaatcagat
aaagaaaagaagaagagcaacctggaactgtttaaagaagaactcaaacagattcaggag
gagagagatgaaaggcacaagtcgaaggggagagtcagtagatttgaacctttaccaaac
acagagggaagaaaatcgttattggatgattctgctccaggttctcatgatgtaggagat
ccaacaaccactaatctttacctgggaaatataaacccccagatgaacgaggagatgctg
tgtcaggagtttgggcggtatggaccgttagcgagtgtgaagatcatgtggccgaggacg
gacgaggaaagagctcgagacaggaactgtggctttgtagcttttatgatgaggaaagat
gcagaacgagcactgaaacatttaaatggaaaaatggttatgaactttgaaatgaaatta
ggatggggtaaaggtgtaccaatcccccctcaccccatctacatccctccctccctgatg
gaacacacccttcctcctcctccatccggcctgccattcaacgcccagcccaaagaaagg
ctgaagaaccccactgtgcccatgcctcctcctcccaaaagcaaagaggagtttgagaag
actctgtcgcaagccatagtcaaagtggttatcccaacagagaggaatttactctgtcta
attcatcgcatgatcgagtttgtggtgcgtgagggacccatgtttgaggccatgatcatg
aacaaagaaatcaacaatccattatacaggtttttgtttgagaaccagagtccggctcat
gtgtactacaggtggaagctttacaccatcctgcagggagattctcctaacaagtggaga
actgaagattttaggttgtttaaaaatggctcattatggcgcccccctccattaaaccct
tacctgcacagtacagctgaggaggagcaggagaaggagaaggagaaggagaaggagaac
ggggaggaagaaaccaaacagaaaggatcactgaaagatgatgagagagataagctggag
gagttgttgagatctttgactcccaggagaaacgatatagctgaagccatgtcgttctgt
ctctctcatgcggatgctgctgaggaaatcgtggagtgtatcgccgagtctctctccatc
ctaaaaacacccctacctaaaaagattgcgaggttatacttggtatcagacgtgctgttt
aactcctcagctaaagtggctaacgcctcctactatcgtaaattctttgagatcaaactg
tgtcagatgttctcagatctaaatgccacgtacagggcgatacagggtcacctacagtcc
gaacagtttaagcaaagagtgatgtcctgttttcgggcgtgggaggattggaccgtgtac
ccggatccgttcctcattaaactgcagaacattttcctgggtctcatcactcttgatcag
gataatgagcctgaagttccaaagcaggtggagaaggtggaggatctggatggtgcaccc
atcatggaggaggaggaggaggaggaggagttagacggtgctcctttagaagatgtagat
ggtgctcctttagatggggctcctctggatggtgcgcctctagatgatctggatggagtt
cctataaggagcacagaggaggagctggatggggttcctctacgtggagctaaagcaggg
tttaagatggcaccatccaagtgggaggaagtggacggaccagctctggaggctcaggct
gttaccacatcaaagtgggaagtctttgatctaccagaagagtcagacaaaaataatgag
agggactcacatgaacttgataggaaggagaaagagaaaagttcatatttacaggaacag
ccattacccccccaaactgtaaaagaggaacagcatgagtccaaatccaacaagctgtca
gagatgagcgaggagaaacgagccaaactcagagaaattgagctgaaagtgatgaagttt
caagacgagctggaatctgggaaacggccaaaaaagtctggacagagcattcaggagcag
gtggaggtgtacagagagaagctgctgctgagggaaaaggagaaagaggtggataaagat
aaggagaaagaaaaagagaaaaaggagaaagagaaatctgacaacacgcacagagataaa
gaagaaccaccatcatcatccagcaggaaagagaagaaacgtagacacagcccatctccc
agtccgagtcgcagtggtagcagcgtccgtcgtgtccgttctccttctccacgatcagaa
cgctcagacagatctcacactaaagagagttcacgcacatcctacagagactcgccacgg
gagagcagaaaatcctccaaacggtctccgtctccaattgcaacacctaaacgatcccgt
agatccagatccagaactcccaaaaagtcctccaaaaaatcgcgttcacgttcacgatct
ccacatcgctcacacaagaaatccaaaaagagtaaacactga
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