Trichomycterus rosablanca: 134334111
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Entry
134334111 CDS
T09921
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134334111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134334111
Membrane trafficking [BR:
trn04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
134334111
Endosome - Golgi transport
Arf GTPase associated proteins
134334111
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
134334111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_3
PH_6
Motif
Other DBs
NCBI-GeneID:
134334111
NCBI-ProteinID:
XP_062872364
LinkDB
All DBs
Position
20:26394604..26445846
Genome browser
AA seq
1527 aa
AA seq
DB search
MSRTEEVMQPVFDWLSGLRLEHYCPAFQEVGLRTVQECQGLTATQLLHMGVALSGHRKRI
LGSLHKLCPSERGIYTETDETQKPVPRARTKFRTSSRIDTQGQDQSSNLEIQKKTLPPIP
PRATQNRPPVPFTSNSVMSQMTSGNATETCDPSTASLSRATQVPVTQPRPVPVPAPRPLH
FGEKQNSGIARPTSPSMSSSSSSSSSEQFHLYEQCSSPGQAEMGIPPLPPKSYVVTTPKG
PKPTPPARPPRRPVVPPRGSSTDKLSPQSKSPAALSSSPADELSDLFPLVDAPPPFRSGT
DSPVKRALLPPTQRRLGSTSSIESYEEGDTSKSGNGDPVVMADKNKFLTLPEKTRHPSLY
SDDEILDDGDLSYDSVSNKRDSWLEDYGRLSISQNSIYLPSTGSVSGSSSSDDTSSQLCP
VIKMGWLDKNPPQGSLIYQHRWVKLDADYMRYFDNEKDVYSKRFIPTASITNVVSVGDQK
FEVVTHNRTFLFRAESDSERNEWVSILRDIVVPARARAINEMTFNPCVSSEMKGYLELRG
LRSKLYTVVCGDKVFLYKNTEDYKLGIGITSIDMNVGNIKDMDRRAFDLTTPYRTFSFVA
ETDQLKEQWMEAMLDSIAEALSNYEVAEKIWAEPSNQKCADCDIAKPEWAAINLGVVFCK
RCAGVHRGLGPSISKVRSLKMDRKVWTDDLIQLFLELGNDRANQFWAANVPPSEALNALS
SSEERRRFINAKYREGKYRRYHPLFGNQKELDNALSINVQSNDVFETLALVFCGADVNCD
TCIPEFPSPLDLAMHHGQKLQGAFLKQNRNTEIPRSDLKLAMHTEHYMAPPSITHNGFLF
KTASMARPITERKNKEEFSRRWCVLNDGNFNYYESDKTATPNGGLKMHEIVCLAVNPPET
HGFDQTFEIYSDAERLYLFGTDNPETMREWVKSIGKSFIPACAEELLQKDFERIGRLRYK
DTLTLESWRVGWFCLENSTLHVCLEESNGRDRIHLQKLLELSRDNEVLVLVERGRTLYIE
GERKLDFHGWAAAIQRAAGSSGDTLSQQQLIETDIPVIVDRCISYVTQCGLTAEGIYRKS
GVNSKITALLEAFRSDARSVKLKKGEHQVDDVSNVLKRFFRSIEEGLFGPQAHEWLSTTA
DSDESRKISQYQLLFENLPRVNKASLRTLVNHLYWVQRFSELNQMNVHNLAIVFGPTLFQ
TDGKDYTAGRVVEDLIQHYIPIFNVNEQQLKKQLDEIMYIIKLRDNLNPKSGPGGDFICT
VYLEEKKEMTEQHVKVPATMTAAELTFEILDRRKINIKEKDYWCCFEINEKEETERPLHY
QERVLPIFHSLGTDSHLLVKKHSAMEAMLIYLASKVDATKHGMLKFREEKSWSLSAGNFN
DRYFMLNQTSLRLYKDVRSNRAEKEWPVKCLKVYQGIKKKVRPPTCWGLTVVYESEKHEK
QERQQWYLCCDTQTEMREWFAAFLSIQHGGVLWPTEWLKSRPVAQSSPPLDSRLGSVSLI
PLRGTESEMRNSVAAFASDPLALLRNL
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggacagaggaggtcatgcagcctgtttttgactggctcagcgggctccgcctt
gagcactactgccccgccttccaagaagtcggtctcagaacagtgcaggaatgccaggga
ctgaccgccacgcaactgctgcacatgggcgtggctctgtcaggccaccgaaagcgcatc
ctagggagtctgcacaagctttgtccatcagaacgaggaatatatacagagacagacgaa
acacagaagcctgttccaagggcgagaactaagttccggacgtcttcaaggattgatacc
cagggtcaggaccagtcttccaatcttgagattcagaagaaaactctgcccccaatccca
ccacgggcaacccaaaatcggccacccgtaccattcacatccaattctgttatgtcccaa
atgaccagtggaaatgctactgaaacttgtgatccttcaacagcatccttaagcagagca
actcaagttcctgtaactcaaccaagaccagtgcctgttcctgcccctcgacccctgcat
tttggcgagaaacagaacagtggcatcgcgaggcctacatcacccagcatgtcttcttct
tcatcttcatcatcatctgaacagtttcacctttacgagcagtgttcctcacctggtcag
gctgaaatgggcattccccctcttcctccaaagtcgtatgtcgtgacgactcctaaaggg
cctaagccaactccaccagccaggccccccagaagacccgttgttccaccacgtggctct
tccaccgataaactctcaccacaatccaagagcccagcagctctcagttcatctccggcc
gatgagctctcggatttgttcccgcttgtggacgccccacctccgttcagatcaggcaca
gactctcccgttaaaagagctttgttaccccccactcagagacgcttgggctctaccagc
agtattgaaagctatgaggagggggatacgtctaaatctggaaacggcgatcctgtagtc
atggctgataagaacaagttcctgacactgcctgaaaagacgcgtcaccccagcctgtac
agtgacgacgagatcctggacgatggagatctttcctacgactcggtatctaacaagcga
gactcatggttggaggactacgggcgattatccatcagccagaacagcatctacctgccc
agtacgggatcagtgtcaggctcgtcctccagtgacgacaccagctcccaactctgccct
gtgataaagatgggctggctggataagaaccctccacaaggatctctgatttatcagcac
cgctgggttaaactggacgccgactacatgagatacttcgacaatgaaaaggatgtatat
tcaaaacgattcatacccactgcctccatcacaaacgtggttagtgttggagatcagaag
tttgaggtggtgacccataaccggaccttcctgttccgagccgaaagcgactccgagaga
aacgagtgggtgtcgatcctgcgtgatatcgttgttccagctcgagctcgggccattaac
gagatgacctttaacccctgtgtgagttcggagatgaaaggctacctggagctccgaggc
ctgcgttccaaactgtacactgtggtgtgtggggacaaagtgttcctctacaaaaatact
gaggactataagctgggtatcggcatcacctctatagatatgaatgtaggaaacattaag
gacatggacaggagagcgtttgacctcaccaccccctaccgaacattcagctttgtagca
gaaacggaccagttgaaggaacagtggatggaggcaatgctagactccatcgctgaagcg
ctctccaactacgaagtcgctgaaaagatatgggcggagccgtccaatcagaaatgtgca
gactgcgatattgccaaacctgagtgggcggccatcaatctgggtgtggtcttctgcaaa
cgctgtgcaggagttcaccgtggtctgggtcccagtatatccaaagtacggagcctgaaa
atggacagaaaggtgtggacagatgatctaatacagttgtttctggaactgggtaatgac
cgggccaatcagttttgggcagcaaacgtccctcccagtgaggcgctgaatgcgctcagc
agcagtgaggagcgccgacgcttcatcaacgccaaatacagagagggcaaataccgccgc
taccacccgctgttcggcaaccagaaagaactcgacaatgcgctgagtattaacgtgcag
tccaatgacgtcttcgagactctcgccctcgtgttttgcggcgccgatgtgaactgcgac
acgtgtatcccagaattcccctctcccctcgacctggccatgcaccacggtcagaagctg
cagggcgccttcctcaagcagaaccgcaacacagagatcccgaggtcagatctgaagctg
gccatgcatacagagcactacatggctccgccctccatcactcacaatggcttcctgttc
aagactgcatccatggctcgaccaatcacggaacggaagaataaagaagagttcagtagg
aggtggtgtgtgctgaacgatggtaactttaactactatgagagtgataagactgccacg
cccaacgggggactgaagatgcacgagatcgtttgtctggccgtcaacccacctgagact
catgggtttgatcaaacgtttgagatctactctgatgctgaacgtctttacctgttcggg
accgacaatcctgaaaccatgagggagtgggtcaaatccattggcaagtcgtttattccg
gcgtgtgccgaggagctgctgcagaaggatttcgagaggatcggccgtctacgttataaa
gacactctgactttggagagctggagagtgggctggttttgtctggagaactccaccctg
cacgtctgtctggaggagagtaacgggagggatcgcatccacctccaaaaactcctcgaa
ctctcgagggataatgaagttctagtgctggtggagaggggcaggactctgtacatcgag
ggcgagaggaagctggattttcacggctgggcggcggcaatccagagggctgctggaagt
tctggagatacgctgagtcagcagcagctcatcgagaccgatataccggttatagtggat
cgctgcatttcctacgtcacacagtgcggactgacagcagaaggaatctaccgcaagagt
ggcgtgaacagtaagatcaccgccctgctcgaggccttcaggagcgacgccagatccgta
aagctgaagaagggcgagcaccaggtggacgacgtttccaacgttctcaagcggttcttc
agatccatcgaggagggactgttcggcccccaggctcatgaatggctcagcactacagct
gattcagatgaaagcaggaagatatcccagtatcagctcttgtttgagaatctgcctcga
gtgaataaagcttcactacgtaccctcgtcaatcacttatactgggtacagaggttctca
gaactgaaccagatgaacgttcataacctggccatcgtgttcgggccgactctgttccag
acggacggtaaagactacacggcaggacgcgtggtggaggatctcatccagcactacatc
cccatcttcaacgttaatgaacagcagttgaagaagcagcttgatgagatcatgtacatc
atcaagctgagagacaacctgaaccctaaaagtggaccaggaggggattttatttgtacg
gtgtatctggaggagaaaaaagagatgaccgagcagcacgttaaggtcccggcgacgatg
acggcagccgagttaacgttcgaaatcctggaccggagaaagatcaacattaaagagaaa
gattactggtgctgcttcgagattaatgagaaagaggagaccgagcgccccctgcattat
caggagcgggtgttacccatcttccactccttagggaccgacagtcacctgctggtgaag
aagcacagcgccatggaggccatgctcatctacctggccagtaaagtggatgcgacgaag
cacggcatgttgaagtttcgggaggagaagagttggagtttaagtgcaggaaattttaac
gatcgatacttcatgctcaatcaaacctcgctgcgactttacaaagacgttcggagtaat
cgagcagagaaggaatggcctgtcaagtgtctgaaggtttatcagggcatcaagaagaag
gttcgccctccaacctgttggggtctgacggtggtgtacgaaagtgaaaaacatgaaaag
caggagaggcagcagtggtatctctgttgtgatactcagacggagatgagagaatggttc
gctgccttcctcagtatacagcatggtggagttctgtggccgaccgaatggttgaagtct
cggccggtggctcagtcgtctcctcctctggactctcgattgggtagtgtgtctctcatt
cctctccgcggtactgagagtgagatgaggaacagcgtagcggctttcgcctccgaccct
ctcgccctactgaggaacctttga
DBGET
integrated database retrieval system
