Trichomycterus rosablanca: 134334129
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Entry
134334129 CDS
T09921
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134334129 (trpc4b)
Ion channels [BR:
trn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134334129 (trpc4b)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
134334129
NCBI-ProteinID:
XP_062872388
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Position
20:4351679..4372541
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AA seq
912 aa
AA seq
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MAQLYYGGGAGSAYSGGRGTSPRRDRIRLRVVRSEPELCAQEKAYLSAVERGDYASVKRA
LQEAEIYFKINVNCVDPLGRSALLIAIENENLEMVELLLAHDVHVGDALLHAIRKEVVGA
VELLLNHKKPSGEKQVPPILLDRQFSEFTPDITPIILAAHTNNYEVIKMLVQKGVSVPHP
HAVRCNCSECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELS
KVENEFKAEYEELSHQCKRFAKDLLDQTRSSRELELILNFRDDISLLQDETNDLARLKLA
IKYRQKEFVAQPNCQQLLASRWYDELPGWRRRHWAGKLITSIFIGLLFPVFSICYLVAPK
SHYGLFIRKPFIKFICHTASYLTFLFFLLLASQHIVSTEPNRQGPEPTPVEWMILPWVLG
FIWTEIKQMWDGGLQDYMHDWWNLMDFVMNSLYLATISLKIVAFVKYSGFKPRESWEMWH
PTLVAEAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLVAFAN
GLNQLYFYYETSDEKSCKGIRCERQNNAFSTLFETLQSLFWSIFGLINLYVTNVKADHKF
TEFVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGT
LPPPFNIIPSPKSMWYLINWIKIHVFKGKSKKTETFGVLGRRAAEKVRLSHQYQDVLKNL
VKRYVAAMIRDAKKEEGLTEENFKELKQDISSFRYEVLGMLKSKRMSLRDSKSISGPSNT
SHPTCLHQLSIVQQKNINPSMYKPQSYLHNGSVISLSETSSREKARKHSIKGSQRSGQGT
KDCANMYAVSEEAGEIDNDESVCSLEDGHENLAKMEKDNGIESECLSEEAEETVPSESAT
AEHICSVSPTDT
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagttgtattacggtggcggagctgggagcgcttatagcggcgggaggggaacc
tcgccgcgccgggaccgaatccggttgcgggtggtgcgctcggagccggagctgtgtgcg
caggagaaagcgtacctgagcgcagtggagcggggagactacgcgagcgtgaaacgagcc
ctgcaggaggctgagatctacttcaaaatcaacgtgaactgcgtggacccgctggggcgc
agcgctttactcatcgccatcgagaacgagaacctggagatggtggagctgctgctggct
catgatgtgcatgtgggtgacgcgctgctccatgccatccgcaaagaggtggtgggtgcc
gtggagctcctgctcaaccataagaaacccagcggagagaaacaggtgcctcctatcctg
ctggacagacagttttctgaattcaccccggacatcacgcccatcatcctcgctgcccac
accaacaactatgaggtcattaagatgctggtccaaaaaggggtgtctgtgcctcatccc
cacgcggttcgctgcaactgttcggaatgtgtatccagttcagatgtggacagcctgcgc
cactcgcgctcccgtcttaacatctacaaggccctggcgagcccgtcgctcattgctctg
tccagcgaggaccccttcctcacggccttccagctcagctgggaacttcaggagctcagc
aaggtggagaatgagtttaaggccgagtatgaggagctgtcacaccagtgcaagcgcttc
gccaaggacctgctggaccagacgcgctcttcccgcgagctggagctcatcctaaacttc
cgtgatgacatcagcctgctgcaggatgaaaccaatgatctagctcgcctcaaacttgcc
attaaataccgtcagaaggagtttgtagcacagccaaactgtcaacaacttttggcttca
cgctggtacgatgagcttccaggctggcggaggcgccactgggctggcaaactaattaca
agcatctttatcggcctgctcttccccgtcttctccatctgctacctggtggcaccaaag
agtcattatggccttttcatccgcaagcccttcatcaagtttatctgccacacagcctcg
tacctgaccttcctcttctttcttctgctggcctcgcagcacatcgtctccacagagcct
aaccgtcagggccccgaacccacccccgtggagtggatgatcttgccttgggttctaggt
ttcatttggacagaaatcaaacagatgtgggacggtggattacaggattacatgcacgac
tggtggaaccttatggactttgtcatgaactctctctacctggcaaccatttccctcaag
atagttgcattcgtcaagtacagtggatttaaaccgagggagagctgggaaatgtggcac
cccacactggtggccgaggctgtgtttgccattgctaacatttttagctccctgcggctc
atctctctctttactgccaactctcatctgggtcccctgcagatctccctgggtagaatg
ctgctggacatcctcaagttcctcttcatttactgcttggtgttggtggcctttgccaat
ggcctaaaccagctgtatttctactatgagaccagcgacgagaaaagctgcaagggcata
cgatgcgaacggcagaataacgctttctcaacgttgtttgagaccttacagtctttgttc
tggtccatattcggccttatcaatctgtacgtgaccaacgttaaagctgaccataagttt
acagagtttgtgggagccaccatgtttggcacatacaacataatctctttggtggtcctg
ctgaatatgctcatcgccatgatgaacaactcctatcagcacattgctgatcatgctgac
attgagtggaagtttgccaggaccaagttgtggatgagctattttgaggaagggggtaca
ctgcctccaccgttcaacatcattcctagccccaaatccatgtggtacctcattaactgg
ataaaaatacatgtttttaaaggaaagtcaaagaagacagaaacctttggagtgttaggg
agaagagctgctgaaaaagtcaggctcagccaccaatatcaggacgttttgaagaacctg
gtaaagcgatacgtagcagccatgatcagagatgctaagaaggaggaaggactcacagag
gaaaactttaaggagctgaagcaagacatctccagtttccgctatgaggtgctgggaatg
ctgaagagcaaaaggatgtccctgcgtgactctaaaagtatttctgggccctcaaacact
tcacatccaacctgtttacaccagctgtctatagttcaacaaaagaatatcaatccaagc
atgtacaagcctcaaagttacctccacaatggctcagtaatttcattaagtgagacatcc
tctagagaaaaggcaagaaaacatagcattaagggcagccaaaggtctgggcaaggaaca
aaagattgtgcaaacatgtacgcagtctcagaggaggctggagagatagataatgatgaa
tctgtttgctcactggaggacggacatgaaaatttggctaagatggaaaaggacaatggg
atcgagtcagagtgtctttctgaagaagccgaggaaacagtgccaagtgaatctgcaaca
gcagaacatatctgctctgtttcacccacagacacgtaa
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