Trichomycterus rosablanca: 134334190
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Entry
134334190 CDS
T09921
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134334190 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134334190 (pds5b)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134334190 (pds5b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
134334190 (pds5b)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
134334190 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
HEAT_RRP12_N
EnP1_C
Motif
Other DBs
NCBI-GeneID:
134334190
NCBI-ProteinID:
XP_062872478
LinkDB
All DBs
Position
20:complement(4974960..5008312)
Genome browser
AA seq
1410 aa
AA seq
DB search
MAHSKNRATDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPEKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIVCEGDSVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEFLKVRSH
DPEEAIRHDVIVSIVTASKKDLSLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQAEAGKEASKQVAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNMLRNHVKDLLDLVKQPKSDNYNKAVFSKVMVITRHLPDPG
KAQDFVKKLAQVLEEDDKIRKQLETLVSPTCSCKQAEVCVKDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIEGTADDDDEGVPTEQAIRAGLELLKVLSFTH
PISFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGGKLEESFPHIKSVLLPVLQQKAKK
GPPRQAKYAIRCIHAMFSNRDTHFAQIFEPLHKSLDTDNMEQLITPLTTLGHLAMLAPEQ
FAGPLKSLVANFIVKDLLMNDRMPGKKTTKLWVPDDEVSPETLTKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILNSDGDLTEQGRMGKPDMSRLRLAAGCAILRLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQAFAQKLHKGLCRLRLPLEYLAVFALCAKDPVKERRAHARQ
CLVKNINLRREYLKQHAAVSEKLISLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDIKEA
LWFILEILMSKNENNSHAFIRKMVENIKQTKDGQCPDDAKMNEKLYTVCDVAMNIVISKS
TTYSLESPKDPVLPSRYFTQPDKNFSNTKNYLPSEMKTLFTPGKPKSANVLGAVNKPLSA
TGKLQTKLSRMETISNASSNSNPSSPGRSKGRLDSGDVDHSENEDISIKSPSEVEKPTRG
RKRGAASNQEDKAPESKAKRGRKKANTSMEESEEQWGEDSSMVDTTMEMEDEQNSPPKRG
RRGRPPKSASNKDETPSKGRRGRRKAAPPPEEEEEENDAEQGAEGEDEEEDAGSENIEVK
PKGRRGRKPRAEVSEAAKDSVESTPQKRRGRPPKSQTAAKKTGGGRTKAAVSQEESEEEM
EMSHHSEEEAEEEQDLSPKVRRKAGRRDRR
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggctcactccaagaatcgagccacagatggcaagatcacctacccgccgggggtgaag
gagatctctgataaaatctcaaaggaggagatggtgcggaggcttaagatggtggtgaag
acatttatggacatggaccaggactctgaggaggagaaggaactgtacctgaatcttgcc
ctgcacctggcctcagatttctttttaaagcacccagataaagatgtcagacttctggtg
gcctgttgtctggccgatattttccgcatttatgcaccagaggcgccctacacatcacca
gaaaagttgaaggatatcttcatgttcataactcgacaactaaaaggattggaggacact
aaaagcgctcagttcaatcgatatttctacttactggagaatatcgcctgggtaaaatct
tacaacatctgctttgaattggaggacagcaatgaaatatttactcaactgtacagaacg
ctgttccaagtaatcaacaatgggcacaatcaaaaggtgcacatgcacatggtggacctg
atgagctcgatcgtctgtgagggagactcagtctctcaagaacttctggacaccgtccta
gtcaacttggttccagcacacaagaatctgaacaaacaagcgtatgacctggccaaagct
ttgctgaagagaactgcacaggccatcgagccctacataacgaatttctttaatcaggtg
ctgatgctggggaagacgtccgtaagtgacctgtcagagcacgtgtttgatttaatcctg
gagctctacaacatcgacagccatctactcctgtctgttctgcctcagcttgagttcaaa
ctgaagagcaacgataatgatgaacgccttcaagttgtgaagctgctggcaaagatgttt
ggggcaaaggattcagagctcgcctcccagaacaaacctctctggcagtgctaccttgga
aggtttaacgatatccatgttcctattcgactggagtgtgtgaagtttgccagccattgc
ctgatgaatcatcctgacttggctaaagatctcacagagttcctgaaagtgcggtcccac
gatccagaggaagccattcgacatgatgtcatcgtttccatagtgaccgcttccaaaaag
gacctttcactcgtcaacgatcaattgctgaactttgtccgagagaggacgctcgacaag
aggtggagggtgagaaaagaagcaatgatgggcctcgcacagatttataagaaatattcg
ctgcaggcagaagccgggaaggaagcatccaagcaggttgcctggatcaaagataaactg
ctgcacatctactaccaaaacagcatagatgaccggttgcttgtggagagaatctttgct
cagtacatggttcctcataatctcgagactacagaacggatgaagtgtttgtattatctg
tatgctacgctggatactaatgcagtaaaagctctaaatgagatgtggaagtgccagaac
atgttgagaaaccatgtgaaagatctgctggatttggtcaaacagccaaaatcggacaat
tacaacaaagcagtcttctcaaaggtcatggtcatcacaaggcatctgccagatccaggc
aaggcacaagactttgtgaagaagctggcacaggttctggaagaggatgacaaaatcagg
aagcagctggagacgctcgtcagccccacctgctcctgcaagcaggctgaagtctgtgtg
aaagacatcactaaaaagctgggcagccccaagcagcccagtaacccctttctagagatg
gtgaagttcttactggagaggatcgctcctgttcatatcgacacagagtctatcagtgca
cttatcaaacaagtaaacaagtcaatagagggaacggcagatgacgacgacgaaggtgtg
cctaccgagcaagctatcagagctggtctggagctcctgaaggttttgtccttcacccac
cctatttcctttcactcggctgagacgtttgagtctcttcttggctgcttgaaaatggac
gatgagaaagtggctgaggctgcactgcagatcttcaaaaacactggtggaaaactagaa
gagagctttccacacatcaagtcggttcttttaccagttctgcagcagaaagccaaaaag
ggccctccccggcaggccaagtatgccatccgttgcatccatgccatgttctccaataga
gacacccactttgcacagatttttgagcctctgcataaaagtctggacactgacaacatg
gagcagctaattactcccctcactacgctcggccacctggctatgctggcgcctgagcag
tttgcaggacctctcaagtccttggtggccaattttatcgtcaaagatcttctaatgaat
gaccgaatgcctggcaagaaaaccacaaagctttgggttccagatgatgaagtttcccct
gaaacactgactaagatccagggcattaagttaatggtacggtggctgcttggggtgaag
aataaccagagcaagtctgggaactcaacactgaggatgctaactgctatactgaacagt
gatggtgacctgacagaacagggcaggatggggaagcctgacatgtcacgtctgcgcctg
gctgctggctgtgccattctgcgtctggctcaagagccgtgctaccatgagatcatcacc
ctggagcagtaccagctttgtgctcttgtcatcaatgatgagtgttaccaggtgcgccag
gcctttgctcagaagctgcacaagggcctgtgccgactgcggttgccgctggagtatcta
gctgtgtttgctctgtgtgctaaagacccagtgaaggagcgcagggctcacgctcggcag
tgcctggtcaaaaacatcaacctgcgcagagaatacctgaagcaacatgctgcagttagt
gaaaagctgatctctctcctgcctgaatacgtggtgccgtacaccatccatctgctggcg
catgacccggactacgtcaaagtacaagacatcgagcagctcaaagacatcaaagaggcc
ttatggtttattctggagatcctgatgtccaaaaatgaaaacaacagtcacgcttttatt
agaaaaatggtagagaacatcaaacagacaaaggacggccagtgtcctgatgatgccaaa
atgaatgagaaactgtacacggtctgtgatgtggccatgaacatcgtcatctccaaaagc
accacatacagtctggagtcaccgaaagaccctgtactgccatcacgctactttacccaa
cctgacaagaacttcagcaacacgaaaaattatcttccttctgagatgaagacattgttt
acccctggaaagcctaaatcagctaatgtattgggtgctgtgaacaaaccattatcagct
acaggcaaactgcagactaagctctcgcgcatggagaccattagcaatgccagcagcaat
tccaaccctagttcgcctggtcgcagtaaaggaagattggactctggggacgtagaccac
agtgagaacgaggacatctcaataaaaagcccatctgaagtagagaagcccaccagaggg
cgcaagcgaggggcagcctcaaaccaggaggacaaggccccagagtcaaaggccaaacgt
ggtcgtaagaaagccaacaccagcatggaggagtctgaggaacagtggggggaggacagc
agcatggtcgacaccaccatggaaatggaggatgagcagaacagcccacccaaaaggggg
cgacgtggacggcctcccaaatccgcatccaacaaggatgagactcccagcaagggcagg
agaggacgcaggaaggcagcaccccctccagaggaggaagaggaagaaaacgatgcagag
caaggggctgagggagaggacgaggaggaagatgcaggcagtgagaatatcgaagtaaag
cctaaaggcagacgaggtcgcaagccaagagcggaggtgtcagaagccgccaaggattca
gttgagtccacgccacagaaaagaagagggcgacctccaaaatcacaaacggcagctaaa
aaaacaggtggtggaagaaccaaggcagcagttagtcaggaggagtccgaagaggagatg
gagatgtcgcatcatagtgaagaggaagcagaagaggagcaagacctctcacctaaagtg
cgacggaaagctggtagacgggatcgaagatga
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