Trichomycterus rosablanca: 134334198
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Entry
134334198 CDS
T09921
Symbol
dpf1
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein neuro-d4
KO
K22198
zinc finger protein neuro-d4/cer-d4
Organism
trn
Trichomycterus rosablanca
Pathway
trn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134334198 (dpf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134334198 (dpf1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134334198 (dpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf-C2H2
zf_RING_Vps8
PHD_2
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
134334198
NCBI-ProteinID:
XP_062872489
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Position
20:23009258..23059315
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AA seq
411 aa
AA seq
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MKLKXLLTLEALCTIPGICSSSIVXHSVSKMATAVQNPLKSQSSGTVIKNSLGEEFYREA
IEHCRSYNARLCAERSMRLPFLDSQTGVAQSNCYIWMGKNHRGPGVAPGQLYTYPARCWR
KKKRLNILDDPRLGPIEFKIDYEAALKKEGGVPEGPVLESLLSGETLDKKVETKEEEAMS
ECQKLLVGDFPHELDVEEMEEDVPKRKNRTKGRACGVGGMRKRQEPAFIEDRDKPYVCDI
CGKRYKNRPGLSYHYTHTHLADEEGEEDTERHTLPFQRKNNHKPKKAADGSVIPNGYCDF
CLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEN
DDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRQLKEKASAYITLT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaatagctgcttacattagaagctttatgtacaataccggggatctgcagc
tcttccattgtanngcattctgtgtcaaaaatggccactgcagtgcaaaaccctctgaaa
tcgcagtcgagtggaactgtcataaagaacagtctgggcgaggagttttatcgtgaggcg
atcgagcattgccggagttacaacgcccgtctgtgcgccgagcgttccatgcggctgccc
ttcctggactcacagaccggagtggcacagagcaactgctatatatggatggggaagaac
cacagaggtccaggtgtagctccggggcagctgtacacctacccggctcgctgctggcgt
aaaaaaaaacgattaaatatcctagacgatccacgcctgggacccatcgagttcaagata
gactatgaggctgccctgaagaaggagggtggtgttcccgagggtccggtgctagagtct
ctgctcagtggagagaccctagataagaaggtggagactaaggaagaggaggccatgagc
gagtgtcagaagctactggtgggagattttccgcatgagctggatgtggaagaaatggag
gaggatgtgcccaagcgtaagaaccgcaccaaaggacgggcatgtggggtcggtggaatg
aggaaaagacaagagccagcgttcatagaagatcgggacaaaccatacgtgtgtgatatc
tgtggcaaacgctacaagaaccgcccaggtctaagttaccactacactcatacacatctg
gcggacgaggaaggagaagaagacactgaacgtcacaccctgccttttcagcgcaagaac
aaccacaagcccaaaaaagcagcagatggttcggtcatccccaacggctactgtgacttc
tgcctaggagggtccaaaaagacgggctgcccagaagatctcatctcgtgtgcggattgc
ggccgatcaggtcatccatcctgcttgcagtttacagtgaacatgacggcagcggtgagg
acttatcgctggcagtgcatcgagtgcaagtcctgcagcctgtgtggcacctctgagaat
gacgatcagcttttattttgtgacgattgtgatcgaggataccatatgtactgtctaagt
cccccaatggctgaacctccagaaggtagctggagttgtcacctgtgtctgcggcagctc
aaggagaaggcttcagcgtacatcacgctgacctaa
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