Trichomycterus rosablanca: 134334204
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Entry
134334204 CDS
T09921
Symbol
med13b
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134334204 (med13b)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
134334204 (med13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
134334204
NCBI-ProteinID:
XP_062872499
LinkDB
All DBs
Position
20:23649337..23684769
Genome browser
AA seq
2131 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRCFVWQGPSSSPIVFPVTEEDPILCSFSRC
LKADVLSVWRRHQTPGRRELWLFWWGDDPNFAELIHHELSSNEDGVWDSGLTYECRTLLF
KAIHNLLERCLMNRCFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGDNNVCTSVEI
NQHQPVYLLSEEHLTIAQHSNNPVQVILSPYGLNGTLTGQSFKLSDPPTQKLIEEWKQFY
PISPNTKEASEDKVDDLDWEDDSLAAVEVLVAGVRMVYPACLVLVAQSDIPALAASSSTG
ASSGGHHSHSTHREPAFSSVTLTPPTSPEDALKVAQPTPRWAKVSQASDGFGMDSTSHHG
GKVPCKLASHLVETVWQECNVNRAQNKRKFSAVANGVSEDEMDKACAWDFVEHYQRGQCN
CSRHKNLKQRVGSTPGLPLSVSQPSQLPSKVKVVDKPEKAEKQQKRPQTPFHHRSFVGED
LSMEPEDRTGHYHALHHSDDAQSKAQTLHTSSRDMASSPQPPPLSPHPCEREEETAAELK
RSSTPLHEQFYPSSSEPCLLPPKSPDHPSFNPLTSEYPTTYPDSQEPTVYVGSAINPNED
TSHNPWRYFRLPGKRSVDLAPPQLPVDKLKQDSLDNAVSVTEMMAPSSMPLKVSEERVKL
YIQKKNQYLSVSVCDGDQEVDTDPYAFVEGDEEFSFADKEKRPGAEAAKRNKRDDGSTSS
TDGVYALHFISFEVIRDVVGFFSLHTYQPANTIDYYLFITTDPQGSACSKPPPSTSLIHE
TDLAVSINDLDNIFNSDEDELTPGARRTGNGTEEKFAGKEPKPAAPDPLSCISSADLHQM
FPTPPSLDQHITGFSPINGGKECGSVETGPGFTLADGSMLSGSFKMEVEEGFCSPKPSEI
KDFSFVFKPESFQIFVGCSLYAPLKTLPSHCLPSIKLPEECLYRPSWTVGKLEMMQSVPA
MPFLNKDTNIPSVGSVIELQEYTQTYTPQTHTPFQSSSAPPSNSGAGILPSPATPRFSVP
TPRTPRTPRTPRGPASAQGSMKYDNSDLYSPASTPSTLRPLSSVEPATAPSVPEAHSLYV
TLILSDSTMNLFKDCNFDSCCVCVCNMNIRGADAAVYISDTGLDSQYSSSDPCSCGFSAV
VNRRYANGAGLFLEDELDIVGRGSDAGQEAEKHLEALRRASSLQLPDEVLFLFQEQCSNP
FPPICSPEPGGSLVPRPPRRLEERDYCSDCYLALEHGRQFMDNMSGGKVDETLIKSSCLH
PWAKRNAVDVSMLFSQDVLRMLHTLQPVLQDAIQKKRSVRPWGPLQGPLTWQQFHKMAGR
GSYGTDESPEPLPIPTFLVGYEYDFVVLSPFALPYWEKLLLDPFGSQRDVAYVVVCPDNE
SLLSGAKIFFRDLTAVYEACRLGQHRPICKDHADGIVTVKSAGSKPLSEQPLSDWFFKTC
NNASSDSMTKLKLYAQVCRHDLAPYLAALSLDSSLLSQRNPASSSSASSRSASSSGASTG
PQNTPPSTNGSTATSSSGTPAPTSACTNSQTMGGLASNKPAPVPPFGAQGIPHAGAPSTG
NPGESASANNQPQAQPEPPESTMEREKVGVPTDGDSHAISYPPAIVVYIVDPFNYEEKSR
GSSSNIWSLGLLCCYMEMLQSLPPHIRNSVFVQVVPCQFLLQPVKNEERHMYGQHLKSLA
FSVYTQCRRPLPNSTNVKTLTGFGPGLAIDTALQSPERSDCVRLYTPPFILAPVKDKQTE
LNETFGEAAQKHNILFVAYCLSHDQRCLLATCTDQYGELLETCIINIDVPNRARRKKGSA
RRLGLQKLWDWCVSLVQVTSLPWRVVIGRLGRMGHGELQDWSILLSRRNLQSLSRRLKEM
CMMCGISAADSPSILSTCLVAMEPQATFVIMPDSVSTGSVFGRSTALNMQTSQLNTPQDT
SCTHILVFPTSATVQVVDLPFNPIHDASDAMGGMDGILDLLVSENDVDPDLINILPNSPT
TSPVHSPGSHYHHGGDGIKGQSADRMESHDETPNILQQPMALGYFVSTAKAGPLPDWFWS
SCPQAKNQCPLFLKASLHLHVSTLQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWL
TCDPATQDRRSCLPVHFVVLNQMYNFIMNVL
NT seq
6396 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtacccaacggggccagcctggaggactgccactccaacctcttc
tgtttggctgacctcacaggcatcaaatggaggtgctttgtttggcagggcccctcgtca
tcacccatcgtcttccccgtgacagaggaggaccccatcttgtgcagcttcagccggtgc
ctaaaggcagatgtgttgagcgtgtggcggcggcaccagacacctggacggcgtgagctc
tggctcttctggtggggtgacgacccgaactttgctgagctcatccaccacgagctttca
agtaatgaggacggagtgtgggatagcggcctgacctacgagtgccgaacgctactcttc
aaagccatccacaacctgctggagcgctgtctcatgaaccgctgcttcgtacgaatcggc
aagtggtttgtcaagccctacgagaaggacgagaagcccatcaacaagagtgaacatcta
tcctgcgccttcaccttcttcctacatggagacaacaatgtgtgcaccagtgtggagatc
aaccagcatcagcccgtgtacctgctaagcgaggaacacttgacgatagcccagcacagc
aacaacccagtgcaagtgattcttagtccatatggtctaaatgggactctaactggccag
tccttcaagctgtctgatccacccactcagaagttaatagaagaatggaagcagttctac
ccaatcagccccaacacaaaggaagcttcagaggacaaggtggacgatttggactgggag
gatgactctttggctgctgttgaggttcttgttgctggagtgaggatggtgtaccctgcc
tgcttggtgcttgtggctcagtcagacattccagccctggctgcatcgagctccaccggt
gcttcttctggaggtcatcacagtcactcgacacacagagagcctgctttttcttcagtc
actctcactcctccgacctcgcctgaggatgccctgaaagtagcacagccaactcccagg
tgggccaaagtgtctcaagcgtctgatggcttcggcatggacagcacaagtcatcacgga
ggcaaggtcccctgcaagctggccagtcatttagtggagaccgtatggcaggagtgcaac
gtcaacagggctcagaacaagagaaaattctcagctgtagccaatggtgtgtctgaagat
gaaatggataaagcttgtgcttgggattttgttgaacactatcaaaggggacagtgcaat
tgctcaagacacaagaacttaaagcagcgtgtggggagcactcctggcctccccctctct
gtcagtcagccctctcagttgccctccaaggtcaaagtggtggacaaacctgagaaagca
gagaagcaacaaaagaggccccagacacccttccaccaccgcagctttgtgggcgaggat
ttaagcatggagcctgaggatcggaccggccattatcacgctctccaccacagcgatgac
gctcagagcaaagcccaaactctacacacatcatcgagggacatggccagctcacctcag
cctcccccgctcagcccccatccttgcgagcgggaggaggaaacggcagctgagctgaaa
cgctcctccacccccctccatgaacagttctacccttcttcctcagagccctgtttgctt
cctcccaaaagccctgatcatccttccttcaaccctctgacctcagagtaccctaccact
tatccagactcccaggagcccacagtgtacgtcggctcagccatcaatcccaacgaggac
acgagccacaacccctggaggtacttccgactgcctggcaagagaagcgtggacctggct
ccgcctcagctccctgtggacaaactaaagcaggacagcctagacaatgctgtttcagtc
actgaaatgatggctcccagttcgatgcccctgaaagtgtcagaagagcgggtgaagctt
tacattcagaagaagaaccagtatctctcagtatctgtatgtgatggagatcaggaggtg
gatacagacccttatgcttttgtggagggagatgaagagttctctttcgctgataaagag
aagaggccaggagcagaagcagccaaaagaaacaagagggatgatggcagtacttcctcg
accgatggtgtgtatgctttacattttatttcctttgaggtcattcgagatgttgttggt
tttttttctcttcatacttaccagcctgccaatacaattgattactatttgtttatcacc
acagatccccagggctcagcctgcagtaaacctcctccgtccaccagcctgatacacgag
accgacctggcagtgtcaattaatgacctggacaatatcttcaactctgacgaggatgag
cttacgcctggagccagaagaactgggaatggaactgaggagaaatttgctggaaaggag
cccaaaccagcagcaccagatcccctgtcctgcataagctctgccgacctccaccagatg
ttccccacccctccatctcttgatcaacacataaccggcttctcccccatcaacggcgga
aaggagtgcggctctgtagaaaccggtcccggctttactctggcagatgggtctatgctc
agtggatcttttaaaatggaggtagaagaaggcttttgcagccccaaaccctctgagatc
aaggacttctcttttgtcttcaagccggagtcctttcagatattcgtgggctgctctctg
tacgcgcctctaaaaacacttcccagccattgcctgccatccatcaagctgccagaggag
tgtctgtacaggcccagctggactgtgggtaaactggagatgatgcagtcagtacctgcc
atgccttttcttaacaaggacaccaacatccccagcgttggcagcgtcatcgagctgcaa
gaatacacacaaacgtacaccccgcaaacccacacccccttccagtccagcagtgcaccg
cccagcaacagtggagcgggcattttgccctcacctgccacgcctcgcttctctgttccc
acgccgagaacaccccgcaccccacgcacaccacgtggccctgccagcgctcagggctcg
atgaagtatgacaactctgacctgtactcgcctgcctccactccctccaccctcaggccg
ctcagctcagtggaaccagccacagctccttcggtgcctgaggcccacagcctttacgtc
actctcattctctccgactcgaccatgaacctgttcaaggactgcaacttcgacagctgc
tgcgtgtgcgtgtgcaacatgaacatcaggggcgcggacgcagccgtttacatcagtgac
accggcctggattcgcagtattctagctctgatccctgctcatgtggctttagtgccgtt
gtcaataggcgctacgcaaacggtgccggcctcttcctcgaggacgagctggatatcgtg
ggcagaggctcggacgctggtcaagaggcagagaagcaccttgaagcgctgcgccgcgct
tcctctttgcagcttccagacgaggtgctcttcctgttccaggaacagtgctccaatcct
ttccccccaatctgcagtcctgagcccggcggcagcttagtcccacggccgccacgacgt
ctggaggagcgggactactgcagtgactgctacctggctctggaacacgggcgtcagttc
atggacaacatgtctggagggaaagtagacgagacactgatcaaaagctcgtgtctgcat
ccctgggccaaacgcaatgctgtggacgtgagcatgctgttctctcaggatgtgctaaga
atgctgcacactctgcagcccgtgctgcaggatgccatccaaaagaagaggtctgtgcgc
ccttggggccccctccagggcccccttacctggcagcagttccataagatggcaggcagg
ggatcctacggcacagacgagtctcctgagcctttacccatcccaacttttctggtgggt
tacgagtatgactttgttgtgctgtcaccctttgcactgccctattgggagaagcttcta
ctggaccccttcggttctcagagagatgtcgcgtatgtcgtagtgtgtcctgacaacgag
tctctgctcagtggcgctaaaatatttttcagggacctgactgcagtgtatgaggcatgt
cgacttggtcagcaccggcccatctgtaaggatcatgctgatggcattgtgacggtaaaa
agtgccggctcgaagcctctgtcagagcagcctctcagtgattggttctttaagacgtgc
aacaacgccagcagtgactcgatgaccaaacttaaactctacgctcaagtgtgccggcat
gacctggctccatacctggcggcactctctttagacagctccctactttctcagcggaac
cctgcctcatcctcctcagcatcttcacgatcagccagctccagcggtgcttccacgggc
cctcagaacacccctccttctaccaacggctccacagccacaagtagcagcggcacccca
gcacccacctctgcttgcactaactcccagaccatgggaggcttagcatctaataagcct
gcaccggtccctcctttcggagctcagggcattccgcacgctggagcccctagcacagga
aacccaggggagagcgcatcagcaaacaaccagcctcaagctcaacctgaacctcccgag
agcactatggagagagaaaaggttggcgtgccaacagatggcgactcccatgccatcagc
taccctcccgctatagtggtctacatcgtggatccctttaactacgaggagaagagcagg
ggttccagctctaacatctggagcctgggacttctctgctgttacatggagatgttgcag
tctctcccgccacatatcaggaattccgtttttgtgcaggttgttccctgccagtttctg
ctgcagcctgtaaagaacgaggagaggcacatgtacggccagcatctgaagtcactggct
ttctcagtgtacacacagtgcaggaggccgcttccaaactctactaatgtcaaaacgcta
acaggttttggtcctggactcgctatagacactgcattacaaagccctgagaggtcagat
tgtgtgcggctctacacaccgccgttcatcctcgccccagtaaaggacaaacagacagag
ctcaacgagacattcggtgaggcagcgcagaaacacaacattctgttcgtcgcttattgc
ttgtcgcacgaccagcgctgccttctggccacctgcacagaccagtatggagagctgctg
gagacatgcatcatcaacatcgacgtgcccaaccgagctcggaggaaaaaggggtcagct
cggcgacttggccttcagaagctctgggactggtgcgtcagcctggtgcaggtgacttca
ctgccttggagagtcgtgataggccggcttggtaggatgggtcatggcgagctgcaagac
tggagcatcctgcttagcaggcggaacctgcagtctctgagccgtcgcctaaaggagatg
tgcatgatgtgtggaatctcggcagcagacagtcccagcatccttagcacctgtctggtt
gccatggaacctcaggcaacctttgtcatcatgccagactccgtatctactggctcggtg
tttggccgtagcactgctctgaacatgcagacatcacagctgaacacccctcaggacacc
tcttgcacccacatcctggtgttccccacctcagccaccgtccaggtcgtcgacctgccc
ttcaaccccattcacgatgcatcagatgccatgggagggatggatggaattctggatctg
ctcgtttctgagaatgatgtggaccctgaccttatcaacatactacccaactctcctacc
acctctccagtgcactcgcctggctcacactaccaccatggaggagatggcatcaagggc
cagagtgccgaccgcatggagtctcacgatgaaactcccaacatcctgcagcagccaatg
gcattgggctactttgtgtctacagccaaggcaggtcccttgcctgactggttctggtcc
tcctgccctcaggccaagaaccagtgtcctctctttctcaaggcctcgttacatctgcac
gtctccacgttacagtccgatgagctgctgcacagtaaacactctcacccgctggactcc
aatcacacatcagatgtgcttaggtttgttctggagcagtacaacgccctgtcctggctg
acatgtgaccctgccactcaagatcggcgctcctgtctgcctgtgcattttgtagtgctt
aaccagatgtacaactttatcatgaacgtgctgtga
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integrated database retrieval system
