Trichomycterus rosablanca: 134334233
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Entry
134334233 CDS
T09921
Symbol
zmp:0000000529
Name
(RefSeq) WD repeat-containing protein 20
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134334233 (zmp:0000000529)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
134334233 (zmp:0000000529)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_EML
WDR55
Beta-prop_VPS8
Tricorn_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
134334233
NCBI-ProteinID:
XP_062872541
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All DBs
Position
20:complement(27811182..27818307)
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AA seq
648 aa
AA seq
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MAGDGGALKDLNEIKSQFRTREGFYKLLTLSDSQQRAGLARAPGAGGAATLAGGGGGGGV
VPGPGGSSPASAGLLPPVRVSMVKLQPEDPSEESERVCFNVGRELYFYTYTNIKKAVDLS
KPIDKRIYKGTQPTCHDFNQYSATAESVALIVGFSAGQVQYLDPIKKETSKLFNEERLID
KTKVTCLKWLPKSENLFLASHASGHLYLYNVEHPCGTTVPQYSLLRQGEGFAVYACKTKT
PRNPLLRWAVGEGGLNEFAFSPDGVHIACVGQDGCLRVFHFDSMELHGVMKSYFGGLLCV
SWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGHKSWVNVVAFDPFTTSIEEEEPMELS
GSEEDLHQIQGPLSFGRVRTSSTLSRLSRHSSKGGGPSVTYRFGSVGQDTQFCLWDLTDD
VLYPRLPLSRALTNTFSSNAPTSISTGLNNTSGTGGVEGHHHPSNSHQTPSLPPPLPRSL
SRSNSLPHPAVANASKTQGGTETGGTVGSGGGSTVPFSIGRFATLSLHDRKSDKSGAGGE
KEHKRYHSLGNISKSNDKINIAPRNNRLDASKVLGTTLCPRMNEVPLLEPLVCKKIAHER
LTVLVFMDDCIITACQEGLICTWARPGKMHSSTQISTQNGNSPSGTVV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgatggaggcgctctgaaggatttaaacgagatcaagtctcagttccgcacc
agagagggattctacaagctgctcacgctctcggactcgcagcagcgggccgggttagcg
cgcgctcccggggccggcggagcagccacgctcgcggggggcggcggaggcggaggggtg
gtaccgggccccggcggctcgtctccggcttcagcgggcctcctgcccccggtgcgggtc
tccatggtgaagctccagccggaggatccgagcgaggagtccgagcgcgtgtgcttcaat
gtcggccgggagctttacttctacacctacaccaacatcaaaaaggcggtggatctcagt
aaacctatagacaagcgtatatataaagggacgcaacccacgtgccatgattttaatcag
tactcggcgactgcagagagcgtggctctcatcgtgggcttctcggctggtcaggtgcag
tacctggaccccatcaagaaagaaactagcaagctcttcaatgaggagaggttaatagac
aaaactaaagtgacgtgtctgaaatggctccctaaatctgaaaacttgttcctggcctct
catgccagtggtcacctctacctctataacgtcgagcacccatgtggcacgacggtccca
cagtattctctgctccggcagggggaaggctttgccgtctacgcctgcaagaccaagaca
cctcggaaccctttgctccgctgggcggtgggcgaaggtgggctgaacgaatttgcgttt
tctcctgacggcgtgcacatagcctgcgtcggccaggacggttgccttcgcgtctttcat
ttcgactctatggagctgcacggtgtcatgaagagctacttcggcggattgctctgtgtt
tcctggagtccggacggcaaatacctggcaaccggaggagaggacgacctggtcaccgtg
tggtcgtttgcggagagtcgcgtggtggcacgtggtcatggccacaagtcctgggtcaac
gtggtggcctttgatccatttaccaccagcatagaagaagaggaacccatggagctcagc
ggtagtgaggaggacctccaccagatccagggaccgctgagtttcggtcgtgttcgaacc
agtagcactttgtcacgtctttctcgtcacagctccaagggcggtgggccttcagtcacg
taccgcttcggatcagtcggccaagatacgcagttttgcctctgggatctcacagacgac
gtcctctatcctcggcttccgctgtcccgcgccctcaccaacaccttcagctccaacgct
ccgacctccatcagcacaggattaaacaacacgagcggaaccggaggagtcgaaggccac
caccacccttccaacagtcatcagacgccatccttaccacctcccttacctcgctcgctg
tccaggtccaactccctcccacatcccgcggtcgccaatgcctccaaaacccagggtgga
accgagaccggagggacggtaggaagcggaggaggaagcaccgtcccattcagcatcggc
cgcttcgccacgctgtcgctccacgatcgtaaatcggacaagtccggagccggaggggag
aaggagcacaagcgctaccacagtctgggaaacatcagcaagagcaacgataagatcaac
atcgcgccgcggaacaacagattagatgcttccaaggtgctggggacgacgctttgccct
cggatgaacgaggtcccgctgctggaacccctggtttgtaaaaagatcgcccacgagagg
ctcacggttctcgtcttcatggacgattgcatcattaccgcttgccaagaggggctcatc
tgcacgtgggcgaggccgggcaaaatgcactcctcaacacagatatcaacacagaacggg
aactcgcccagcggtacggtggtatag
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