Trichomycterus rosablanca: 134334330
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Entry
134334330 CDS
T09921
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
trn
Trichomycterus rosablanca
Pathway
trn04137
Mitophagy - animal
trn04140
Autophagy - animal
trn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134334330 (hif1al)
04137 Mitophagy - animal
134334330 (hif1al)
04148 Efferocytosis
134334330 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134334330 (hif1al)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134334330 (hif1al)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
PAS_2
Motif
Other DBs
NCBI-GeneID:
134334330
NCBI-ProteinID:
XP_062872653
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Position
20:16093338..16139068
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AA seq
634 aa
AA seq
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MTDSVAKRPSSEMRKVRLRDAARCRRSQETEVFYELAQSLPLARRVTSHLDKAGIMRVTL
SYLRMRQLLHSSSTKLPPTVKKEEDPTDAFYQQALAGFMLVLNEEGDMIFLSDNVSKYIG
ITQMEMLGQSVYDFVHPCDQEELRDLLTTKPGLLKKKSESCTEYDFFLRLKSTLTTHGKT
VNMKSATWKVVHCTGHLQMLSSEVDSFSPAGRYMTLLCEPIPHPSSVEFPLDSSTLLTRH
NMDLTFTQCDSRVTELIGYDPRNLIGRSAYKFFHVLDFDHMTRSFNILIAKGQVCTSHYR
FLAFNGGYVWMKTQATVLYNSKTSQPESIMCLNFILSGVEEADTVLSLEQTRTSDHDCQS
DMETNDSEDEFSSSSSSGELFLQMKDDPEDLLQLTPAPGDAIIPLTDDMEFSFAPPSSPN
TVPACPKDLCSPKLRQLLSPIFDNPSPASSTLSSGDEFLMDTGDVEKFFSIKPVENTAQT
TLVNDMTEMDLDMLAPYISMDDDFQLSFLPQLDETNVNMDEVLITTITLRKRNLKEEDED
LPSLTTIQEKRQNCSLEDEFLLAHASLGQTHLQLSDASEEHKPPPWKQNHLLTDNDPLLG
ATQTLSDTAALMRDSSSKPPDLMAHVVGTKSSLT
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacggactctgtggctaaacggccgagctcagagatgcggaaagtgcgcttgcgtgat
gctgcacgctgtagaaggagtcaggagacggaggtgttttacgagcttgcccaatctttg
cccctcgctcgccgtgtcacctcccaccttgacaaagccggcatcatgagggtgaccctg
agctacctgcgtatgcgccaacttctccactcctcttcaaccaaattgcctccaactgtg
aaaaaagaagaggatcccacagatgcgttctatcagcaagcactggctggctttatgctg
gtgttaaatgaggaaggagacatgatctttctctcagacaatgtcagcaaatacatcggc
attacacagatggagatgcttggtcaaagtgtgtatgactttgtgcacccttgtgaccaa
gaggagctaagggaccttcttactactaaaccaggattgttaaagaagaagtcagagagc
tgtacagagtacgacttcttcctgagactgaaaagcacactcacaacccacggaaaaaca
gtgaacatgaagtctgccacctggaaggtggttcactgcacaggccacttacagatgtta
agcagtgaagtggacagcttttctcctgctggacgctacatgactctactgtgtgagccc
atcccccatcctagcagtgtggagttccctctggacagcagcactctccttacacgccac
aacatggacctgacctttacccaatgcgacagccgggtaactgagcttattggatacgac
cctcgtaatttgattggccgatcagcctataagtttttccatgtgctggattttgatcat
atgacaaggagcttcaatatcttaattgctaaaggtcaggtgtgcaccagccattaccgc
ttcttagcttttaatggaggatatgtctggatgaagacacaagccactgttctttacaac
agcaagacctcccagcctgaatccataatgtgcctcaacttcatccttagcggagtggaa
gaggcagacaccgttttatccctggagcagacacgcacatcagatcatgactgtcagagt
gatatggagacaaatgactcggaggatgagttcagcagcagtagcagtagtggggagctc
ttccttcaaatgaaagatgatcccgaagatctgctgcagctgacaccagccccaggggat
gccatcatcccactgacagatgatatggagttttcctttgccccaccatccagcccaaat
acagtacctgcatgtccgaaagacctatgtagccccaaactgcggcagctgttgtcaccc
atattcgacaatccttcccctgcctcatccactctgagctccggcgatgagtttttaatg
gacacaggagatgtggagaagttcttttccattaaaccagtggagaatacagctcagaca
acgctggtcaatgatatgactgagatggatttggacatgttggctccatatatttccatg
gatgatgacttccagttgtcctttctgccccagctggatgaaacaaatgtaaacatggat
gaagtgttaatcactaccattacattaaggaaaagaaatctgaaagaggaagatgaggac
ctgccctctctaacaaccattcaggagaaaagacagaactgttctttggaagatgagttc
ctgcttgcacatgcctctctgggtcagacacacctgcagctttcagatgcttcagaggag
cataagccaccaccatggaagcaaaatcatcttctgactgacaacgacccgttgttggga
gctacacagacactgagtgatacagcagctctgatgagggactcctcatccaagcctcct
gatttaatggctcatgtagttgggactaaatcatcactgacgtga
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