Trichomycterus rosablanca: 134334333
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Entry
134334333 CDS
T09921
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134334333
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134334333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
Motif
Other DBs
NCBI-GeneID:
134334333
NCBI-ProteinID:
XP_062872659
LinkDB
All DBs
Position
20:complement(27884234..27897856)
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AA seq
677 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHLLEA
EANNAAIVSQWQQEPKEKAVSLLLSHLPLLQPRNSEAKCEYMKLLQQVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTNLALWLNHLDEHLSARPLPPASHQSGLYYHHHHHARQGS
DEWTSSAETLDGHVWLDKPPSTCSSPAGQNGHMAFPGTGGMTSPGIGNSTGLPGQVHPSP
LKRTVSHIPANQQVCSSDWPGQEDTSGRQGAAGVEHAPLSPQGSVASSGSEQTDEQSNAR
NTFQEDGSGMKDVPTWLKSLRLHKYASLFSQISYEEMMVLTEHHLESQNVTKGARHKIAL
SIQKLRERQSLLKSLEKDILEGGNVRNALQELQQIIITPIKAYVPAAAATAGLRDAEPAG
KGVNPVDEKDSGVEGFQSHNPAPCDGESSSTPISEGDIPGQLTRVMGKVCTQLLVSRPDE
ENISCYLQLIEKCLTHEAFSETQKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWAYG
SNSLPTAGSVGGVVSRRGQRQFTLPPRGAPLPSRIGIATHSPRHTLTNQPGLTAQGRQNL
WFGNPGGSNSMPGQSRSSVQRTHSLPVQTSPQTMLLFQQPECPVPGPDPEINPTLESLCL
SMTEHALGDGMDRTSTL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtggggatactgactgactggtttaagggatggaacgagtgc
gaacagacggtggcgctgctgtcgctgctgaagagggtgtcgcggacgcaagcgcgcttc
ctccacatctgtctggagcactggctggccgactgcaccgagatacacttactagaggcc
gaggccaacaacgcagccatcgtcagccagtggcagcaggagccgaaggagaaggcggtg
tcgctgctgctctcgcacctcccgctgctgcagccgcgcaacagcgaggccaaatgcgag
tacatgaagctgctgcagcaggtcctgagccacaccatagagagcagcctgttcgtggag
gagagccgccagctgctgtcatacgcgctcatccaccccgccaccacgctcgacgaccgt
accaacctcgcgctctggctcaaccacctggatgagcacctctccgcccgccccctgccc
cctgcctcgcaccagtccggactctactaccaccaccaccaccatgctcggcagggttcc
gacgagtggaccagctcggccgagacgctggatggccacgtctggctcgataaaccgccg
tctacgtgcagctcgcccgccggacagaacggccacatggcgtttcccgggacgggaggc
atgacctcacccggcatcggtaacagcacaggtctgcctggtcaggtgcacccgagcccc
ctgaagcgcaccgtgtcccacattccggccaatcagcaggtctgtagctccgattggcca
ggccaggaagacacgtccgggcgccagggcgcggccggggtggagcacgcacctctgtcc
ccgcagggcagcgtggcatcatcgggcagcgagcagacggacgagcagtccaacgcgcgc
aacaccttccaggaggacggcagcggcatgaaggacgtaccgacgtggctgaagagtctc
cgtctgcacaagtacgcctccctcttctcccagatcagctacgaggagatgatggtcctc
acagaacatcacctggagtcacagaacgtcactaaaggtgctcggcacaagatcgctctg
agcatccagaagctgagggagcgccagagcctcctcaagtctctcgagaaagacatcctg
gagggcgggaacgtccggaacgccctgcaggagctgcagcagatcatcatcacacccatc
aaggcctacgtccccgccgccgccgccaccgccgggctgagggacgccgagcctgccggg
aagggggtcaatccggtggacgagaaggattcgggcgtggagggattccagagccacaat
cccgccccgtgtgacggggagtcgtcgtccacgcccatctcagagggtgacatccccggg
cagttaaccagggtgatggggaaagtttgcacgcagctgctggtgtcgcgacccgacgag
gagaacatcagctgttacctgcagctcatcgagaagtgtttaacacacgaggcattttca
gagacccagaagaagaggttggtatcatggaagcagcaggtgctgaagcttctccgtctg
ttcccgcgaaaagccatgctggacatgcccgtgtacagacagaaagggtgggcgtacggt
tcgaactctctgcccacagcaggctctgtgggtggggtggtgtcccggcgaggacagagg
cagttcaccctgccgccccgcggcgcccctctgcccagccgcatcggcatcgccacgcac
tcgccgagacacacgcttaccaaccagcccggcctcaccgcacagggtagacagaatctg
tggtttgggaatccaggaggcagcaacagcatgcccggtcagagccgcagttccgtacag
agaacacactctcttcctgtacagacgtccccacaaaccatgctcctgttccagcaacca
gaatgcccagttccgggacctgacccggagatcaaccccacgctggagtcactgtgcctc
agtatgacagaacacgccttaggggatgggatggaccgaacgtcgacgttatga
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