KEGG   Trichomycterus rosablanca: 134334351
Entry
134334351         CDS       T09921                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
trn  Trichomycterus rosablanca
Pathway
trn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134334351 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:trn01009]
    134334351 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:trn03400]
    134334351 (pnkp)
Enzymes [BR:trn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     134334351 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     134334351 (pnkp)
Protein phosphatases and associated proteins [BR:trn01009]
 HAD phosphatases
  Other HAD phosphatases
   134334351 (pnkp)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     134334351 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 ABC_tran MMR_HSR1
Other DBs
NCBI-GeneID: 134334351
NCBI-ProteinID: XP_062872687
LinkDB
Position
20:complement(22036364..22046616)
AA seq 584 aa
MQCVLVSASGTRTELSDGRALIFGRGPESGVKDKKCSRHQVKLVADYANQEIHVTQLGPN
PSSLDGQTLSRGESGRLSANGTLYLVNQSYPFTVEFSGPPKEASLASSSQQKPGTRTAHD
KKVAPKRSIQDFFASSPKKTTKRSLSPEDPASSSKRVRSEKSDEEDEENLAQENLKQLQM
FAQKASSQPSPPRSTTTAASVCSQSHWQQIGNLMLYTAAGVASSTKIAGFDIDGCIITTK
SGKVFATGPDDWKIIFPEVQPKLAGLLKKGFKVVFFTNQMGIARGKLRPEAFKSKAEDIL
QTLNLPIQVFVAAGPGIYRKPVTGMWDYLCEKANDGIAVDKSESIYVGDAAGRPANWAPG
KKKKDFSCSDRLFALNIGLQFYTPEEFFLGWKAAPYNMPSLDPRTLNSKDHLYDPPNASL
TSTSQEVIVAVGFPGSGKSTFFNTHIIPKGYVYVNRDTMGSWQQCVAACERALKEGRSIA
VDNTNPDVESRKRYVDVSRNAGVPCRCFNFTASFELAKHNNTFREIAPSTTKHVHVNDMV
FHSYKKKFVAPSLSEGFSEILQIHFVPSFTDSQSEALFRQFLGS
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgcagtgtgtactagtgagtgcttcaggaacccggactgaactgtctgatggtagagct
ctgatctttggtcgaggtcctgaatctggagtaaaggataaaaagtgttcaagacatcaa
gtaaagcttgtggctgactacgccaaccaggagattcatgtgacgcagctcggtccaaac
ccttcatccttggacgggcaaactctgagccgtggtgagtctggacgcttgagcgcaaac
ggcaccctctaccttgtcaatcagagttacccgttcactgttgagttttccggtccaccg
aaagaagcctctttagcttcgtcttcccagcaaaaaccagggaccagaacagcgcatgat
aagaaggttgcacccaagaggagcatccaggatttctttgcttcttcgcctaaaaagaca
acgaaaaggtcgctcagccctgaagatcctgcgtctagttctaaacgtgtgcgctctgag
aaatccgatgaggaggatgaagagaacttggcgcaggagaatctcaagcagctgcagatg
tttgcccagaaagcgagtagccagccatcaccgccaaggagtaccaccactgcagcaagt
gtctgctcacagagtcactggcagcaaattggcaaccttatgctgtatactgcagcagga
gtcgccagcagcaccaagatagctggatttgatattgatggctgcattattactacaaag
tccggaaaagtgtttgctactgggccagatgactggaagatcattttccctgaggtacag
cccaaactggccggcttgttgaagaaaggattcaaggtggtgttttttaccaatcagatg
ggtattgctcgaggcaagctcaggccggaggcgttcaaatcgaaagctgaagacatcctt
cagacgttaaatcttcctattcaggtatttgttgcagcaggtccaggtatttacagaaag
cctgtcacaggaatgtgggattacctgtgtgagaaggcaaatgatggcatagctgtagac
aaatcagagagtatctacgttggagatgctgcaggccgtcctgcgaactgggctcctggg
aaaaagaagaaggacttttcctgtagtgacaggctgtttgcactaaacattggattgcag
ttttacactcctgaggaattcttcctgggttggaaggctgctccttacaacatgccatcc
ttagatccgaggactttgaactcgaaggaccatctttatgacccccctaatgcctcactt
acttctaccagccaggaagttattgttgctgttggatttcctggatctggcaagtccacc
ttctttaatacccacatcattccaaagggctatgtgtatgtcaacagggacacaatgggt
tcctggcagcagtgcgtggcggcttgtgagcgtgctctgaaagaaggccggagcatagct
gtggacaacaccaaccctgatgtagagtctcgaaaacgatatgtggacgtcagtaggaac
gctggagttccctgtagatgctttaactttactgcttcctttgaactggccaaacataat
aacacgtttcgtgagatcgctccctcaaccaccaagcatgttcatgtcaacgacatggtc
ttccacagctacaaaaagaagtttgtggctccgagtctgtctgagggcttctccgaaatc
ctgcagatccactttgttcccagttttactgacagtcagtcggaggctctgtttagacag
ttcttagggagctaa

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