KEGG   Trichomycterus rosablanca: 134334360
Entry
134334360         CDS       T09921                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
trn  Trichomycterus rosablanca
Pathway
trn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    134334360 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trn03019]
    134334360 (ndc1)
Messenger RNA biogenesis [BR:trn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     134334360 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 134334360
NCBI-ProteinID: XP_062872699
LinkDB
Position
20:857434..875502
AA seq 671 aa
MFSISQNCWFVQKVVRWRSVASIAWSVLLLPPVITLLVFLIRFSLFHPIQWISESFGVLT
SLSSAFCVVLLCAATFLVGFFNLQYYSVVPSIPCSRVALLAEVLHPTQCVYSLVHCAVGM
LVMWCVCVMAGGRYQALHSPCAQNQSGGVEACLNEHHLFLLLAGAFMGYAHSLMGVVHNI
HYVSFHVIQQYKYMRFKGSLAWVVKCSAVQSLYFSRNFILLYFFFGHIPRTWMSSTLNLP
IDSSVHTLDSLAGLCDFSLLYELWISGTFLLLTWYITVLLFRIYVAEPYRFPMQSLFAEE
AEWCLPKALTETSSLVMKFLALQDLALLSQHSPSRRQEVFSLSQPGGHPHNWNAISKECV
SLLRDLTQRLVTHHDAVASSSNGRAKPPSDRSDPGSGSSVSSATSGPEDLPQTPRPSALI
RTPASVFGSAARDVGSPMTAPFTPDLGSPFPNPAVHALLGQQPVQRPWSVQSPHITRRNP
KLWSTSADSQTNGSPPASPVPGSTPPPQPQRPSLLSQWLQNRKEQVKGFLSKRGLVVYLF
NKLPEASSQALFADSQAHIWALEGLSHLVAASFSEDKYGVVQTTLPSILDSMLSLQEAVD
RHFKLPHASSKPVKSPSSFGDSSYKTLRFALRAALKTAVYRITSTFRENLNAVSVSPEHQ
KRLQQFLQFKE
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgttctcaattagtcagaactgctggtttgtacagaaggtggttcggtggagatctgta
gccagtatagcctggtccgtactgctgctgcctcccgtgatcacgctcctggtgttcctc
atccgattcagtctgttccaccccatccagtggatctcagaaagcttcggagtcctgacc
tcgctgagttcggcgttctgcgtcgtcctcctgtgcgccgccacgttcctggtgggattc
ttcaacctgcagtattactcggtggttccgtccatcccgtgttccagagtggccctgctg
gcggaagtgcttcaccccacccagtgcgtttactctctggtgcactgcgcggtcggcatg
ctggtcatgtggtgcgtgtgcgtgatggccgggggtcgttatcaagctctgcactcgccc
tgcgctcagaaccagagtggcggcgtggaagcgtgtctgaacgaacatcatctcttcctc
ctgctggctggagccttcatggggtacgctcacagtctgatgggcgtggtccataacatc
cactacgtctcctttcacgtcatacagcagtacaagtacatgaggtttaaaggctccctg
gcgtgggtggtgaagtgcagcgcggttcagtccctgtacttcagcaggaacttcatcctt
ctctatttcttcttcggtcacattcccaggacgtggatgtccagcactctgaaccttccg
atcgacagttctgtacacactctggactcgctggctggactgtgtgatttctcgctgctg
tatgagctgtggatcagcgggacgttcctgctgctcacctggtacatcaccgtgctgctc
ttcaggatctacgtcgccgagccgtacaggttccccatgcagtcgttgtttgcggaggaa
gccgagtggtgcctccctaaagccctgaccgagacgagctccctggttatgaagtttctg
gctctgcaggatttggcgttgctgtcccagcattccccttcacgcagacaggaagtcttc
agcctcagtcagccaggtggacaccctcataactggaacgccatcagtaaggagtgtgtg
tcgctgctgagggatctgacccagcgcctggtcactcatcacgacgccgtggcctcctcc
tccaacggccgagccaaacctccgtccgacagaagtgaccccgggtccggctcctcggtc
agctcagccacgtccggaccggaggaccttccccagactcctcgtccaagcgctctgatc
aggaccccggcttccgtcttcggttcggccgcgagggacgtgggctcccccatgaccgcg
cctttcacgcctgacctgggcagccccttccccaaccccgccgtacatgccctgctcggg
cagcagccggtccagagaccctggtcggttcagagtcctcatatcaccaggaggaacccc
aaactctggagcacgtctgccgactctcagaccaatggaagccccccggcgtctcccgtt
cccggctccacacccccacctcaaccgcagaggcccagtctgctctcccagtggctccag
aacaggaaggaacaggtcaaaggtttcctctccaagcgggggctggtggtgtatttattc
aacaagctgcctgaagcgtcgagtcaagccctgttcgctgatagccaagctcacatctgg
gcgctggaaggactgtctcatctggtggccgcttcgttttccgaggacaagtacggagtg
gtgcagactacattacccagcatcctcgacagcatgctctcccttcaggaggctgtggac
cggcacttcaagctccctcacgcctccagtaaaccagtgaagagtcccagcagttttggc
gactcctcgtataagacgctgcgcttcgctctgagagccgctctgaaaaccgccgtctac
aggatcacctcaacgttcagagagaatctcaacgccgtctccgtttctccggagcatcag
aagcgacttcagcagttcctgcaatttaaagagtag

DBGET integrated database retrieval system