Trichomycterus rosablanca: 134334378
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Entry
134334378 CDS
T09921
Symbol
scn4ba
Name
(RefSeq) sodium channel, voltage-gated, type IV, beta a
KO
K04848
voltage-gated sodium channel type IV beta
Organism
trn
Trichomycterus rosablanca
Pathway
trn04261
Adrenergic signaling in cardiomyocytes
trn04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134334378 (scn4ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
134334378 (scn4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134334378 (scn4ba)
Ion channels [BR:
trn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134334378 (scn4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_2
Ig_3
I-set
BCLP
Adeno_E3_CR1
Golvesin_C
Motif
Other DBs
NCBI-GeneID:
134334378
NCBI-ProteinID:
XP_062872722
LinkDB
All DBs
Position
20:complement(21627434..21641151)
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AA seq
245 aa
AA seq
DB search
MGRRSSNKRDTDGWRNSGSFLHRCTSSGDMVHSSIVITLLLGVWCAQALEISVGKVHSIE
VMNGSSVLLPCTYSSCIGIKNLYFNWHYNDNGTMIKICEGTIPAEGFEPHVAIYHDRFSF
IGSSKNNNISVLLWNVTFEDEGEYTCFGRNPKEKNRNHSAVFSIIVVDQLKVVDKTLTLL
IVSVLGGLIGLIIIVMVIKAVVLHVMNKSQDKNKECLVSNSGNDNTENGLSGSKADNKAS
PKAQK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggggagacgttcgagtaataaacgggacacggacgggtggaggaacagcggatcgttc
ctgcacaggtgcacaagctctggtgatatggtccattccagcatagtcatcacccttctc
cttggtgtatggtgtgcacaggcgttggaaatatcggtgggcaaagttcactctattgag
gtgatgaacggtagctctgtactcttaccttgcacttacagtagctgtatcggcatcaag
aacttatacttcaactggcattacaatgacaatggcacaatgattaagatctgtgaaggc
acaattccggcggagggtttcgaaccccatgtggcgatctatcatgaccgtttttcattc
attgggtccagtaagaacaacaacatttctgtcctactatggaacgtcacttttgaagat
gagggcgagtacacctgctttggccgcaaccctaaggagaagaaccgaaaccacagcgct
gtgtttagcatcatcgttgtggatcagttaaaagtagtggataaaacactgacactcctc
attgtctccgtgcttggtgggctcatcggtttaatcattatcgtcatggtaataaaggcg
gtggtcctccatgtcatgaacaaatcccaggacaagaataaagagtgccttgtaagcaat
tcagggaacgacaacacagaaaatggcctttcgggatccaaagcggacaacaaagcatca
ccaaaggcgcagaaataa
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