Trichomycterus rosablanca: 134334381
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Entry
134334381 CDS
T09921
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134334381 (chd7)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134334381 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
134334381
NCBI-ProteinID:
XP_062872724
LinkDB
All DBs
Position
20:180194..270219
Genome browser
AA seq
2946 aa
AA seq
DB search
MADPGMMSLFGDDGNLFSDGLEGLGDCGYSSQGQANPMNQQMPHEHQAYNQLPTSMHMNA
TPSVPAQPKLGQHYDPFSQYDPQGGRMMTNGPVNGIPSPHSRYHGGNGAAGAGHHVYPGA
QGDGRGPAGGAAQSFPDGGASAGGSWAPQAMQMPEQNRPSFQQQQPQQQQQQQQVHGHQM
GPYMGRPEFGGMQGHNQTQTPPRMNHFSQGMAQDANRFMGHMQPNMAAPAMRHPSQTPHQ
QHQPGQHFLHRPVHPDSQFPQSPSKQQQQQQVMGGRGHQNMAFGINNQQVTSNSVNSSGQ
YPPYPQYSALNQGLPSAAGISPSMSLSTSSNSNVQCYPNPGAPQCYPVNQMPPQPMHPGP
NPPKMPQQQQQQPQQHLAPPQGSYPSQPSMSPMRNLGGNPTGTPPPQRPHPQQLPHPPAQ
MFGTLSPNHRAMSAPGHAEAQVHPQQLQTPALPFQQAQQVQQVRSPPALPVTQQPLGSSS
PQPANWAPNAHQSPPANHHQVPPHIQHSPSDPSSDMTSPSKLSGSNLQQGGCDAQLTDGE
QKPKKKKKKKVKAGEEPGEQDLDVSLDASGSVGPDGDAGGSSPPAKKSKKKPKEPKEPKA
PKTPKTPKTPKTPKEPKEPKEKKPKTTTPKPKSAKKPSTKKPDSESSTKKEVKRKREPAV
PSDTEKSPPPPPSPEEEDDDGVQKRRSSRQVKRKRYTEDLEFRISDDEEDEDSQGPKSPS
TTSEQTEVPDAEGPVVEKIMGMRTVKKQLESGEEVDVQEFYVKFKSFSYLHCRWADLEEL
EKDKRIHQKVKRFKAKQAHNTFLTEMDDEPFNPDYVEVDRVLDVSESTDENGELVTLYLV
KWCSLPYEDSTWELKADIDQGKIEEFETVMAQEPQPERVERPPAGDWQKSESSRDYKNSN
ALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTVQSITFLHEIYLKGIRGPFLVIAPLS
TIPNWEREFRTWTELNVVVYHGSQASRRTIQAYEMNYRDEQGRVIKGAYKFHAIITTFEM
ILTDCPELRGVPWRCVIIDEAHRLKNRNCKLLEGLKLMDMEHKVLLTGTPLQNTVEELFS
LLNFLEPERFPSESTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETII
EVELTNIQKKYYRAILEKNFTFLSKTGGGGASSSVPNLLNTMMELRKCCNHPYLINGAEE
KIMEEFREGHPADLPDFHLQAMIQGAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILE
DYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCII
FDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMS
GRENAANGVQQLGKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIESE
GKGSTFAKASFVASGNRTDISLEDPDFWQKWAKKAELDLDEINGRNTLVIDTPRVRKQTR
HYSSIKEDEMMEYSELESDSEDKPVQKSRRPQDRAHGYPRSECFRVEKNLLVYGWGRWKD
ILSHGRFKRPLNERDVEIICRALLAYCLLHYRGDENIKSFVWDLITPTEDGQSRTLTNHS
GLSAPVPRGRKGKKGKLTTAQPNMPQADWLADCNPDVLLQEDSYKRHLKHHCNKVLLRVR
MLYYLRQEIIRDVADRILEGTESSECDIWIPQPFHADVPADWWDAEADKSLLIGVFKHGY
EKYNSMRADPSLCYLERVGMPDAKAIAAEQRGADMVADGEDEDPEYKPMRTAFKDDLDDF
TNSPLDDKEEMMDVEGGEALKPSENGKSTSLYWPTTSALTARLRRLITAYQRCSKRQEAA
NKPDRRRRRWYRDETLLNIPADCGALGLEPNTAAAAAAAFLTEGASFVKTSPFLHESAAL
LADGAAFYKERRQRWTRREEADFYRVVSTFGVVYDVQKQCFDWTQFRMLARLDKKTNESL
EKYYAAFIAMCKRVCRMQVKDSEMADPTLIIDPITEERASRTLYRIELLRRIREQVLPHP
KLEQRLRLCQPSPDLPTWWEAGKHDRDLLHGAAKHGVSRTDYHIQNDPQFGFLQAQRKFL
QNPGAETGPVPNPPTPVDLTKEEELKEEKPELQDLKQEVQEEKPEEASPEQEVKTEDEET
KVEKEPEEEIKTEENQSAAEEEKLLESKEVQEPPLPKETPPEEQENPDSVENLKASAEKA
SEEEEEEEKMDEDEDKSEKSSQAEAGASDRKNFDEESNASLSTARDETRDYFGMDDVEPS
ASQMFGERSAFSFWPKDRVMINRMDNICEAIIKGKWPSNRRQFFDVPGLLPGYGAMVTDS
PLPRRSMGDFSILNQSSYSGSDDITMSPQVNKDEALSLSVPRQRRRRRRKVEIEAERAAK
RRNLMEMVAQIRESHTSDAQHQAMDLTKSLHGLVPSSSSSVVFPGTAGALKSQMELLQAA
GASRANGALMEAEMPMRRRRGRRKNVEGLELLFMNKNSQLSTEDTNGTKAGVDGASVPRH
VPAPSPKEDVKGEEGPSTNELQEWLRQHPTYTMDVPGYIPKSDELLLSQLGKPKQKRHRC
RNPNKIDINTLTGEERVPVVNKRNGRKMGGAMAPPMRDLARWLVENPEFAVSPDWTDIVK
QSGFLPDSMFDRLLTGPVVLEEGVRRRGRRPKSEIAKATAAAQASLASASSASSSGVNPF
LLNGLFGGMDLSSLQNLQNLQNLQLLMGFPAALSAGAADGKNAASMLPLMLPAMGGLPNV
FGLGGLFGANVAAGAAANSTAESEETKKDEETEEKSEEKEEAAEKPAETEATDANAAAAA
TTAAANLSTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLGLPGFSPAALAELQNAMSGA
LGGAAEGKEANKEAQEQDKANSDSEGEKAEDLTGGPEELDSPDAGEDDEDDEDEDAGDDN
DDDKSD
NT seq
8841 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccggaatgatgagtctcttcggggacgatgggaatttattctcggacggt
ctggaaggcctcggggattgtgggtactcgtcccagggccaggccaaccccatgaaccag
cagatgccacacgagcaccaggcgtacaaccagcttcccacgtccatgcacatgaacgcc
acgccttccgttccggcacagcccaaactgggccaacattacgaccctttctcccagtac
gaccctcagggggggcgcatgatgaccaacgggcccgttaacggtataccctcgcctcat
tctcgctaccacggagggaacggcgccgccggagcggggcaccacgtctacccgggggcg
cagggggacgggagagggccggcgggaggcgcggcgcagtcgtttcctgacggaggggcg
tcggcggggggcagctgggccccccaggccatgcagatgcccgaacagaaccggccctcg
tttcagcagcagcagcctcagcagcagcagcagcagcagcaggttcacgggcatcaaatg
gggccctacatggggcgcccggagttcggtggcatgcaggggcacaatcagactcagacg
cctcccaggatgaaccacttctcgcagggcatggctcaggatgccaatcgcttcatgggg
cacatgcagcccaacatggcggcgccggccatgcggcacccgtctcagacgccgcatcag
cagcaccaacccgggcagcatttcctccaccgcccggtgcacccggactcccagttcccc
cagagcccatccaagcagcagcagcagcagcaggtgatgggtggcagagggcatcagaac
atggcgttcggcatcaacaaccagcaagtcaccagcaacagtgtgaacagctcaggtcaa
taccccccgtacccccagtacagcgccctgaatcagggattacccagcgccgcagggatc
agtcccagtatgagccttagcaccagcagcaactccaacgttcagtgttaccccaacccc
ggtgccccccagtgttaccccgtcaaccagatgcccccgcagcctatgcacccgggaccc
aacccgcccaagatgcctcagcagcagcagcagcagccgcagcaacacctcgctcctcct
cagggatcgtacccctctcagccctccatgtctcccatgaggaacctggggggcaacccg
accgggaccccgcccccgcagcggccccacccccagcagctcccccacccgccggcgcag
atgttcggcaccctgtcgcccaatcacagagcgatgagcgcgccgggccacgccgaggct
caggtgcacccgcagcagctgcagacgcccgcgctgcccttccagcaggcgcagcaggtg
cagcaggtgaggtctccgcccgcgcttcctgttacccagcagcccctgggctcgtcttcc
ccccagccggccaactgggcccctaacgcacaccagtcaccgccagccaaccaccaccaa
gtgcctcctcacatacagcattcaccgtcagacccgtcctcagacatgacctctcccagc
aagctgtcgggctcgaaccttcagcagggaggctgcgacgcacagctgaccgacggcgag
cagaagcccaagaaaaagaagaagaagaaagtgaaggcgggcgaggaacctggagagcag
gatctggacgttagcctggacgccagtggatcagtaggtccggacggagatgctggagga
tcttctcctcctgctaagaaaagcaaaaagaaaccaaaggaaccgaaggagcccaaagct
cccaaaactcccaaaacaccgaaaactcccaaaacacccaaagaacccaaggagccaaaa
gagaagaagcccaagacgaccactccaaagcccaagagtgcaaagaagcccagcactaag
aagccggactctgagagcagcactaagaaggaagtgaagaggaagagggaaccggccgtc
ccctccgatactgagaagagtcctccacctccaccctcacctgaggaggaggacgatgat
ggagttcagaagaggcgctcgagtcggcaggtgaagaggaagcgctacactgaagatctg
gagttcaggatctcagacgatgaggaggacgaggattctcaggggcccaagtctccctcc
accacctccgaacagacggaggttcctgatgctgaaggacccgtggtggagaagatcatg
gggatgaggacggtgaagaagcagttggagtcgggggaggaagtggacgtccaggaattt
tacgtgaagttcaagagtttctcgtacctgcactgtcgctgggctgatcttgaggagctg
gagaaggataagaggatccaccagaaagtgaagagatttaaagctaaacaggctcataat
accttcctaactgagatggacgacgagccgtttaacccggattacgtggaggtggaccga
gttctggatgtttccgagagcaccgatgaaaacggagagctggtgaccctgtacctggtg
aagtggtgctcgttaccctacgaggacagcacgtgggagctgaaggccgatatcgaccag
ggaaagatcgaggagtttgagacggtgatggcacaagagcctcagccggagcgagtggag
cgacctcccgccggggactggcagaaatcggagagttcgagggactataaaaacagcaac
gcgctcagggaataccagctggagggagtcaactggctcctgttcaactggtacaacaca
cgtaactgtattttggcggatgagatgggtctgggtaagacggtgcagtccatcacgttc
ctgcacgagatctacctgaagggaatccgtggccccttcctggtcatcgcccctctctcc
accatcccgaactgggagagggagttcaggacgtggacggagctcaacgtggtggtttat
cacggcagccaggccagccgcagaaccatccaggcttacgagatgaactacagagacgaa
cagggccgcgtgataaagggggcgtacaagttccacgccatcatcaccacgttcgagatg
atcctgaccgactgccccgagctgcgcggcgtgccctggcgctgcgtgatcatcgacgag
gctcaccgactcaaaaacaggaactgcaaactactggagggactgaaactcatggacatg
gaacacaaggtgctgctgacaggaactcctctgcagaacacggtggaggaactcttcagc
ctgttgaacttcctggagccggagcgcttcccctccgaatccaccttcatgcaggagttc
ggggacctgaaaaccgaggagcaggtgcagaagctgcagggcatcctgaagcccatgatg
ctgcggagactcaaggaggacgtggagaagaacctggcgcccaaggaggagaccatcatc
gaggtggagctcaccaacatccagaagaaatactaccgcgccatcctggagaagaacttc
accttcctgtccaagaccggaggcggaggtgcgagctccagcgtccccaacctgctgaac
accatgatggagctgagaaagtgctgtaaccacccctacctcatcaacggagctgaggag
aagatcatggaggagttcagggagggtcaccccgccgacctgcccgatttccacctgcag
gccatgatccagggggcgggtaaactggtgctcatcgataagcttcttcccaaactgaag
gctggaggccaccgagtgctgatcttctctcagatggtgcgctgcctggatatcctggag
gactacctcatccagaaaaggtacccgtatgagcgtatcgatggcagagtgagggggaac
cttcgacaggcagctattgaccgtttctcccgccctgattcggaccggtttgtgttcctg
ctgtgtacccgcgccggaggtttgggcatcaacctcaccgccgctgatacctgcatcatc
ttcgactcggactggaaccctcagaacgacctgcaggctcaggctcgatgccacaggatc
ggacagagcaaggccgtgaagatctaccgtctgatcaccaggaactcgtacgagagggag
atgttcgacaaggccagtctcaaactgggactggataaagccgtgctgcagtccatgagc
gggagagagaacgccgccaacggggtgcagcagctcggtaagaaagagatcgaggatctg
ctgcgtaagggagcgtacggagctctgatggacgaggaggacgagggttccaaattctgt
gaggaggacatcgatcagatcctccagagacgcacacagaccatcaccatcgagtctgag
ggcaagggctccaccttcgccaaggcgagttttgtggcctcagggaacaggactgatatt
tctctggaggatccagatttctggcagaaatgggcgaagaaggcagagctggacctcgac
gagatcaacggcaggaacacgttagtgatcgacacgccccgggtcaggaagcagacgagg
cactacagctccataaaggaggacgagatgatggaatactcggagttggagagcgattct
gaagataaacccgttcagaaatcacgccgccctcaggaccgggctcacggttacccacgc
agcgagtgtttcagggtggagaagaacctgctggtgtacggttggggacgttggaaggac
atcctgtcccacgggcgtttcaagcggcccctgaacgagcgggacgtggagattatctgt
cgggccctgctggcgtactgcctgctgcactacagaggagacgagaacatcaagagcttc
gtctgggacctgatcacccccaccgaggacggccagagccgtaccctcaccaaccactca
ggtctctctgctcctgtaccgcgaggtcgtaaaggaaagaagggaaagttaacgaccgct
cagcccaacatgcctcaagctgattggttggcggattgtaacccggacgtcctgctgcag
gaggacagctacaaacggcacctcaaacaccactgcaacaaggtgctgctgcgggtgaga
atgctttactacctcagacaggagatcatcagagacgtggcagatcggatactggaggga
accgagagcagtgagtgtgacatctggatcccgcagcccttccatgctgatgttcctgct
gactggtgggacgctgaggccgataagtccctcctgatcggggtatttaaacacggttat
gagaagtataactcgatgcgagccgaccccagcctgtgttatttggagagggtggggatg
cccgatgccaaagccattgcagcggagcagaggggagcggacatggtggcagatggtgag
gatgaggatccggagtataaacccatgcgcacagcgtttaaagacgacctggacgacttc
actaactctcctctggatgataaggaggagatgatggatgtggaaggtggagaagccctg
aagccgagtgagaacggtaagagcactagcctgtactggcccaccacgtcggcgctaacg
gctcgtctgcgccgcctcatcacggcctaccagcgctgcagcaagcgccaggaagcggcg
aataaacccgaccgccgccgccgccgctggtacagagacgagacgctgctgaacattccg
gccgactgtggcgctctcggtctggagcccaatacagccgccgcagccgccgccgccttt
ctcaccgagggagcttcgtttgttaaaacctcaccgtttctgcacgagagcgccgccctg
ctggctgatggagctgctttttacaaagagagacgccagagatggacccggcgtgaggaa
gctgacttctaccgcgtggtttcgacgttcggagtggtgtacgatgttcagaagcagtgt
ttcgattggacgcagttccgtatgctggctcggctggataagaagaccaacgagagtttg
gagaagtattacgccgccttcatagccatgtgcaaacgcgtctgccgcatgcaggtgaag
gattcagagatggctgaccccaccctgatcatcgaccccatcacagaggagcgcgcctct
cggactctgtaccgtatcgagttattacggcggatcagagagcaggtcctgccccacccc
aaactggagcagcgtttgcgcctgtgccagcccagccccgatctccccacgtggtgggag
gcgggcaaacacgaccgcgacctcctgcacggcgccgccaagcacggcgtgagccgcacc
gactaccacatccagaacgacccgcagttcggcttcctgcaggcccagcgcaagttcctc
cagaacccaggggcagaaaccggcccggtacccaacccccccacgcccgtcgatctgact
aaagaggaggagctcaaggaggagaaaccagagctccaggacctcaaacaggaggtacag
gaggagaaacctgaggaggcttctcctgagcaagaagtcaagactgaagatgaggagacg
aaggtggagaaggaacctgaagaagaaataaagactgaagagaaccagagcgctgctgaa
gaggagaagctgctggagtctaaagaggtccaagaacctcctctacccaaagagactcct
cctgaggagcaggagaaccctgacagtgtggagaacctgaaagccagcgctgagaaagct
tcagaggaggaggaagaggaggagaagatggatgaagatgaggataaatcagagaaatcc
tcccaggctgaagctggagcctcggacaggaagaactttgatgaggagagtaacgcctct
ctgagcacggcgcgggacgagacccgcgattattttgggatggacgatgtggagccctca
gcttctcagatgttcggagagagatcggccttctccttctggcctaaagaccgggtgatg
atcaatcggatggataatatctgtgaagccatcattaagggtaaatggccgtccaatagg
aggcagttctttgatgtgcccggcctgttgcctggttacggtgccatggtgacggacagc
cccctgcccaggaggagcatgggtgatttctccatcctgaaccagagcagctacagcggc
agtgatgacatcaccatgtccccacaggtcaataaggatgaagctctgagtctctccgta
cctcgtcagaggaggcgcaggaggaggaaggtggagatcgaggctgaacgagccgctaag
cggaggaacctgatggagatggtggctcagatccgcgagtctcacacctccgacgctcag
catcaggccatggatctgaccaagtccctgcacggcctggttccgtcctcctcctcctcg
gtggtgttcccgggtacggcgggagctctgaagtctcagatggagctgctgcaggccgcc
ggagcctccagagctaacggcgctctgatggaggcggaaatgcccatgaggaggaggcgg
ggccggcggaaaaacgtggagggactcgaactgctcttcatgaacaagaacagccagctc
agcacggaggacacaaacgggaccaaagctggtgtggacggggcgtcggtacccagacac
gttcctgctccttcacccaaagaggatgttaaaggagaagaaggaccgagcactaacgag
ctacaggagtggctgaggcagcatcccacctacaccatggatgtcccgggatacatacca
aagagtgacgagctgctcctctcacagctcggtaaacccaagcagaagagacatcgctgt
cgaaaccccaacaagatcgacatcaacaccctgaccggggaggagagggtccccgtcgtc
aacaagaggaacggcagaaagatggggggcgctatggctcctcccatgagggatttggct
cgttggttggttgaaaatccggagttcgccgtttctccagactggacggacatcgtcaaa
caatcgggcttcctccccgactccatgttcgatcgtctcctaacgggtcctgtggtcctg
gaggagggagtgcggcgccgaggacggagaccaaaatccgaaatcgctaaagccacggcg
gcggctcaggcctctctggcctcggcttcctctgcctccagctcgggcgtgaaccccttc
ctgctgaacggtctgtttggaggcatggacctgagcagcctgcagaacctccagaacctg
cagaacctgcagctgctcatgggcttccccgctgctctgagcgcgggagctgctgacggc
aagaacgccgcctccatgctgccgctcatgctgcccgccatggggggcctgcccaacgtg
ttcgggctcggggggcttttcggggcaaatgtggccgccggagcggcagcgaacagcacg
gccgagtccgaggagaccaagaaagacgaggagaccgaggagaagagtgaggagaaggag
gaggcggcggagaaaccggccgagaccgaggcgaccgatgcaaatgctgccgccgctgcc
accacagccgccgccaatctctccaccaacccgctggcgtttaaccccttcctgctgtcc
accatggcccccggactcttctacccctctatgtttctgccccccggtctgggtggatta
gggctgcccggattctccccggcggctctggccgagctccagaacgccatgagcggagct
ttaggaggagccgccgaggggaaggaggcgaataaggaggcgcaggagcaggacaaagca
aacagtgactcggagggagaaaaagccgaggatctgaccggaggtccggaggaactggac
tcgccggacgccggtgaggacgatgaggacgatgaggacgaggacgccggagacgataac
gacgatgataaaagcgactga
DBGET
integrated database retrieval system
