Trichomycterus rosablanca: 134334387
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Entry
134334387 CDS
T09921
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134334387 (npas1)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134334387 (npas1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
CENP-B_dimeris
HLH
Nucleo_P87
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
134334387
NCBI-ProteinID:
XP_062872735
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Position
20:complement(8131351..8170568)
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AA seq
762 aa
AA seq
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MMAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFEL
AKMLPLPGAITSQLDKASVIRLTISCLHMRHFASQGDPPWSPLLEGNSNCHKVRRSSHSL
ATDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPA
DHVEMAERLGIKPHLRSEMGCQTAQESVSSSASTSSLAGTPEPAPSSPLSSGDELAERGF
FVRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRLALMPGSSRSLHRPMGLLALAHTLPPST
LNEVRMESHMFVFRVNMDLQITYCENRISEYMDLSPAEVVGHTCYYFIHVEDLDTIRQSH
EDLLRKGQVVTGYYRWLQKRGGYLWVQSCATVSINHKAPHERNVIWVNYILSLTEMPDIS
LDLLQLPETLKAERLRTNSTTHDISPKAQVSSGVQPVKARGSRTEPERKGRETCTHPTVN
QSDNKRKRSYLSSSENTTETRQQLEVFRQRENSLSGSSDSASESDEEEEEKEEEWEHNSK
KRKSEDGAIKQVGDAGKVHNGRAVIQQLKTVVTSTARSNIKIEQEILGGVCPPNGNRWSN
TNATSGGVNGGSSPSQDPESVTTVIPTKALFSPSSPISASPLSREERSIHSRRGPDYELL
QRLAAGGAAGRVLFHPLALGPPGPQSLYAPSTIRYAPPELPTAHAETQRLDHTSKSAAFF
PHLQRLAALPPFSGFSPSDPTFPPSLPFCMNGLRGAAGTEED
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccatgccgttcgtcagtgagggcaagtgtgtgagtgtggagtgggacttc
ctgcaaggactcctcgccaagccgcctaccctaccctgtttacaaaatttgaggaaggag
aagtcccgaaatgcagcacgttctcggcgtggtaaagagaactttgagttttttgagctg
gccaaaatgcttcctctgcctggcgccatcaccagccagctggacaaagcttccgtcatc
cgcctgaccatcagctgcctacacatgagacactttgccagccagggagacccaccatgg
agccccctactagaggggaacagtaactgccacaaagtgaggagaagcagtcactcattg
gcaactgatatatttgagcaacatctgggagctcatcttctacagtctctggatgggttt
gtttttgttgtcagtcaagaaggccgctttctctacatctctgagacggtgtcgatctac
ctgggcctctcacaggtggagttgacaggcagtagtgtgtttgactacatccatcctgca
gaccacgtggagatggcggagcgactgggaattaaaccacaccttcgttctgaaatgggc
tgtcagactgcacaagagagtgtctcaagctctgcctccacctcttcgctggctgggaca
cctgaaccagccccttccagccctctatcatctggggatgaactagctgagcgaggtttc
tttgtccgtatgaaatccacccttactaagcgtggcctccatgtcaaatcctctgggtat
aaggtgatccatgtaactggccggattcgctgtcggctagccctcatgccaggctcctct
cgttcactccatcggccaatgggattgcttgctcttgctcacacactcccaccctccact
cttaatgaggtgcgcatggagagccacatgtttgtgtttcgggttaacatggaccttcag
attacctactgtgagaacaggatttcagaatatatggacctgagcccagctgaggtggtg
ggacacacttgctactacttcattcatgtggaagacttggacactatccgacagagccat
gaagacttgttgagaaaggggcaggtggtgactgggtattaccgctggctgcagaagaga
ggcggatatctttgggttcaatcctgtgccactgtgtccattaatcacaaagcaccccac
gaacgcaacgtcatctgggtcaactacatcctcagtctgacagaaatgccagatatttca
ctggatttactgcaactcccagaaaccctcaaagctgagcgtcttcgcacaaattccacc
acccatgacatctctccaaaagcacaagtttccagtggtgtccagccagtgaaggccagg
ggtagccgaactgaacctgagcgcaaaggcagagaaacatgcactcacccaaccgtaaac
caatcagacaacaagaggaagaggtcttacctgtcaagctctgaaaacacaacagaaaca
agacagcaactggaggtgttccggcaaagagagaacagtttgtcaggctcctcggactca
gccagtgagagcgacgaggaagaggaggagaaggaagaggagtgggagcacaacagcaag
aagcgaaagagtgaagacggagccataaaacaggtgggtgatgcaggaaaagtccataat
ggccgtgctgtaatccagcaacttaagactgtggttactagcactgccaggtcaaacatt
aaaattgagcaggagatactaggaggggtgtgtcctcccaacgggaaccgatggagcaac
actaatgccacgagtggaggcgtcaatggtggtagctctccttcccaagatcctgaatca
gtcactacagttattccaactaaagctctttttagcccatcttcacctatctcagcttca
ccactgtccagggaagaacgctctattcacagcagacgaggtccggattatgagctcctt
caaagactagccgcaggtggagcagctgggagagttctgttccacccgcttgcccttggc
ccacctggacctcagagtctatatgccccaagcaccatccgttatgctcctccagagctt
cccactgcccatgctgagacgcagcgcctggaccacacatccaaatctgctgccttcttc
ccacacctacagaggcttgctgctctgccacccttcagtggcttctctccttcagatcca
accttccctccatccctgcctttctgcatgaatggactgagaggagctgcagggacagag
gaggactga
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