Trichomycterus rosablanca: 134334390
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Entry
134334390 CDS
T09921
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
trn
Trichomycterus rosablanca
Pathway
trn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134334390 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134334390 (gtf2b)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
134334390 (gtf2b)
Prokaryotic type
Archaeal type
TFB
134334390 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
KIF9
BRF2-like_C_cyclin_rpt
Harpin
Motif
Other DBs
NCBI-GeneID:
134334390
NCBI-ProteinID:
XP_062872739
LinkDB
All DBs
Position
20:complement(1078235..1086539)
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AA seq
316 aa
AA seq
DB search
MASTSRGDTLPRVQCPSHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
NKDPSRVGDAQNPLLNGGDLTTMIGKGTGSASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKHVQMAATFIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaccagtcgtggagatactctgcccagggtgcagtgccccagtcaccccgat
gccctactggtggaggattacagagccggagatatgatctgccctgaatgtggcctcgta
gtcggtgaccgcgtcatcgacgtcggctcggagtggagaacgttcacgaacgagaaagcc
aacaaagacccgtcgcgtgtcggcgatgcgcagaacccgctcctgaacggtggcgacctc
actaccatgatcggcaagggaacgggctcggccagcttcgacgagttcggtaactccaag
tatcagaaccgcagaacgatgagcagctcggaccgagccatgctgaacgccttcaaagag
atcagcaccatggccgacaggatcaacctgccccggaacatcgtggaccgtacaaacaac
ctgtttaagcaagtttacgagcagaagagcctgaagggaagaagtaacgacgccatcgct
tcagcgtgtctatacatcgcctgcagacaggagggcgtcccccgaaccttcaaagagatc
tgtgccgtgtcccgcatctccaagaaggagatcggccgttgcttcaagctcatcctgaag
gctctggagaccagcgtggatctcatcaccaccggagacttcatgtcccgcttctgctcc
aacctgggcctgcccaaacacgtgcagatggccgccaccttcatcgccaggaaggccgtg
gagctggacctggtgccggggcgcagtcccatttccgtggccgccgccgccatctacatg
gcctctcaggcctcggccgagaagaagacgcagaaagaaatcggagacatagcgggcgtg
gccgacgtgaccatccgtcagtcctacaggctcatctacccccgcgctgctgacctcttc
cctccagacttcaagttcgatactcctgtggataaactgcctcagctgtga
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