KEGG   Trichomycterus rosablanca: 134334443
Entry
134334443         CDS       T09921                                 
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
trn  Trichomycterus rosablanca
Pathway
trn00565  Ether lipid metabolism
trn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:trn00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    134334443 (pafah1b1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:trn03036]
    134334443 (pafah1b1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:trn04147]
    134334443 (pafah1b1a)
Chromosome and associated proteins [BR:trn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    134334443 (pafah1b1a)
Exosome [BR:trn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134334443 (pafah1b1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd LisH LisH_PAC1 Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd SutA-RBD DUF2570 LisH_2
Other DBs
NCBI-GeneID: 134334443
NCBI-ProteinID: XP_062872825
LinkDB
Position
20:16311117..16345353
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSFFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPIGQKRDPKEWIPRPPERYALNGHRSPVTKVIFHPVF
SVMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPDNASPTILEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGMLFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTTLDFHKTAPYVVTGSVDQAVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcccagagacaacgagatgaactaaatcgagcaatagctgattaccttcgt
tccaatggatatgaagaggcatactcatttttcaagaaggaggcggaattagacatgaat
gaagagttggataagaagtacgccggccttttggaaaagaaatggacttcagtaatccga
ttacaaaagaaggtgatggaattagaatcaaagcttaatgaagcaaaagaagagatcact
ttaggaggaccaattggacaaaagcgagaccccaaagaatggatcccccgcccccctgag
agatatgctcttaatggccacaggagtcctgtcacaaaggtcatcttccatcctgtcttc
agtgtcatggtgtctgcctcagaggatgctacaataaaggtatgggattatgaggcagga
gactttgagcgtaccttaaagggccatacagactctgttcaggacatctcctttgatcag
actggaaagctgctggcctcctgctcagcagacatgacaattaaactttgggacttccaa
ggatttgagtgcatcaggaccatgcatgggcatgaccataatgtttcgtctgtagccata
atgcccaatggagatcatataatatctgcttcaagagataaaaccattaaaatgtgggaa
gttgccactggatactgtgtgaagacgttcactggtcacagagagtgggtgcgtatggta
cgacctaatcaggatggttccctgattgccagttgctcaaatgaccagacagtgcgagtg
tgggtggtggccacaaaagaatgcaaggctgaactgagggaacatgagcacgtagtagag
tgcatctcatgggctcctgacaatgccagtcccactatactggaggccactggttcagag
actaagaaaagtggaaaacctggaccttttcttttgtctggatcgagagacaagactatc
aaaatgtgggatatcagcactggcatgtgccttatgacactggttgggcatgataactgg
gtgcgtggaatgctttttcaccctggtggaaagtttatagtgagctgtgctgatgacaag
actttaaggatctgggactacaaaaataaacgctgcatgaagaccttgagtgctcatgaa
cattttgttaccactctggattttcacaagactgctccgtatgtggtcactggaagtgta
gatcaggcagtaaaggtgtgggagtgtcgctga

DBGET integrated database retrieval system