Trichomycterus rosablanca: 134334481
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Entry
134334481 CDS
T09921
Symbol
tsr1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134334481 (tsr1)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134334481 (tsr1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
eEFSec_4th
Motif
Other DBs
NCBI-GeneID:
134334481
NCBI-ProteinID:
XP_062872866
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Position
20:complement(15920136..15945092)
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AA seq
768 aa
AA seq
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MDRRHKANQLRRNKKDSVLSEKRRLGSRDGAPHLVAVIGLHALADVAAVTRMLRAEGAGG
VLHEHQENKGNQDSFGLVLPRFKQRFTFYRPDTADLHSVLDVAKVADSLVFVLDSTEGWD
SYGDYCLSCLFTQGLPSHVLVCQGIADLAIKKRTESRRALSRLAETRFPEARLLPLDTEQ
DAALLLRHLGTQKQQRLAYRSRRSYMLVQSASYKPSSCQDGTEGPPTGLGTLCVTGYVRG
CPLQVNRLVHIAGHGDFQLSQIDAPTDPLPIVTGAPRPVKQAGGDDVEMDGGAGGEVRVL
MKADPSQRENLQAEAEVDPMDGEQTWPTESELQEAEEARKNKRMMKVPKGTSEYQATWIV
DDEENEDDDEDDLSSCEDDDNDMMGDEDDVENDSQDDDKEEEEEEEEEEEEISVSDRVGT
EQKYDDAMDAVEEEDGLKRYREARSHEMFPDEVDTPLDVSARTRFQRYRGLKSFRSSPWD
PMENLPQDYSRIFQFQNFERTRRRILAEAAVEEDGAMVGWYVTVHIEDVPPSVMESYQAG
KPLVLVSLLPHEQKMSVMHLLVRRQPNFTEPIASKEELVFQCGFRRFRASPIFSQHTSGD
KHKMERFLRADSPAVVSVYAPITFPTAGVLLFKQRSNGMQDLVATGSLMSCDTQRVVLKR
IVLSGHPFKINRRSVVARYMFFNRDDILWFKPVELRTKWGRRGHIKEALGTHGHMKCVFD
KQLHSQDTVLMNLYKRVYPRWTYDPYVPFPLPWVKKEEPEGLDDIDME
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggacagacgacacaaagcaaaccagctacgtcgcaacaagaaggattcggtgctttca
gagaagcgccgactgggcagtagagatggagcgcctcacctggtggctgtgattgggctg
catgcgctggccgatgttgctgcagtgacccggatgttaagagcagagggggctggaggt
gtgctgcatgaacaccaggagaacaaaggaaatcaggacagctttggactcgtccttcct
cggtttaaacaaagattcactttctaccggcccgacacagctgacctgcactctgttctg
gacgtggccaaggtggcagacagtttggtgtttgtactggattctacagagggctgggac
agttatggagactactgcctttcctgtctcttcacacaggggttgccaagtcatgtgttg
gtgtgtcagggcattgctgacttggcaataaagaagcgaactgaatctcgacgggcactt
tcacgcttggctgagactcgtttcccagaggcgcgcctcctccccctggacacagagcag
gatgcggcactgctccttcgtcacctgggaacacagaaacagcagcggctggcctatcgt
tcaaggcgatcatacatgctagttcagagcgcctcctataagcccagttcttgtcaggat
ggtacagaagggccacccacaggattggggactttgtgtgtgacagggtatgtgagaggc
tgccccctgcaggttaacagactggtacatattgcaggtcatggggactttcagctcagt
cagattgacgctcccacagatcctttacccatcgtcacaggtgcaccacgccctgtaaaa
caagccgggggagatgatgtggagatggatggcggagctggtggagaggtacgtgtgctg
atgaaggctgacccctctcagagagagaacttacaggcagaagctgaggttgatcctatg
gatggagaacagacttggcctactgagtctgagcttcaggaggctgaagaggcaaggaag
aacaagaggatgatgaaagtcccaaaaggaacctctgagtatcaagccacttggattgtg
gatgatgaagagaatgaggatgatgatgaggatgatctaagtagttgtgaggatgacgac
aacgatatgatgggtgatgaagatgatgttgaaaatgactctcaggatgatgataaggag
gaggaggaggaggaggaggaggaggaggaggagatcagtgtgtcagatcgtgttggaact
gaacagaaatatgatgacgccatggatgcagtagaggaggaagatggactgaagcgctat
cgtgaagctcgttcacatgaaatgttccctgatgaagtggacacacccttagatgtatct
gcaagaacaagatttcagcggtacagagggttaaagagtttccgctcatctccgtgggac
cccatggaaaacctgccacaggactattcccgcatcttccagttccagaactttgagcgc
acacgccggcgtatcctggctgaagctgctgtagaagaggatggggcgatggttggttgg
tacgtgactgtgcacattgaggacgtgcctccctcagtgatggaaagctaccaggcaggc
aaaccccttgtgttggtctctctgctcccacatgaacagaagatgtcagtgatgcaccta
ctggtgaggcgacagcccaatttcactgagcccattgcatctaaggaggagctggtgttc
cagtgtggcttcagacgtttcagagcttctcctatcttttctcagcacacctcaggggac
aagcacaagatggagcgttttctaagagccgattctcctgcagttgtgtctgtttatgct
ccgatcaccttccccactgctggagtcctgcttttcaaacagaggtctaatggaatgcag
gacctggtcgccaccggaagccttatgagctgtgatactcagcgcgtggttctgaagagg
atcgtgctgagcgggcaccctttcaagattaaccgacgttcagtcgtcgctcgctacatg
tttttcaacagagatgatatcctgtggtttaagccagtagagctgcggactaagtggggc
cgaagaggacacatcaaggaggctttgggtacccacggtcacatgaagtgtgtgtttgac
aaacagctgcattctcaggacactgtgctcatgaacctgtataaaagagtgtatccacgc
tggacgtatgacccttatgtgccgtttcctctaccctgggtcaagaaagaggaaccagag
ggtcttgatgacattgatatggagtag
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