Trichomycterus rosablanca: 134334488
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Entry
134334488 CDS
T09921
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1 isoform X1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134334488 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134334488 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134334488 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134334488 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134334488 (si:ch211-11n16.2)
Membrane trafficking [BR:
trn04131
]
Autophagy
Other autophagy associated proteins
Others
134334488 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
134334488 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
FYVE_CARP1-2
MMR_HSR1
AIG1
Motif
Other DBs
NCBI-GeneID:
134334488
NCBI-ProteinID:
XP_062872881
LinkDB
All DBs
Position
20:complement(22990656..23003501)
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AA seq
661 aa
AA seq
DB search
MFRGDGDVIMSEMLLKEMEAVSLGPCLEVEEPESGRSFLLIDENETLQVKDEAHFLKKLG
CSAGQGVKVLSIFGNTGDGKSHTLNHVLFEGEEVFATSPSPGSCTVGVWAAYEPRLGLVI
LDTEGLLGASTQQNQRMRLLLKVLAVSDVALYRTRAERLHNDMFHFLGSASAAYLKYFTP
QLRALSSRCGLDVPLSNLGPAVVVFQETSRTQLLGHDRTVPADVVLQKRFHDLGLSTEAF
SSVQYVGTQTITPPTDFSQLLDTIKMQVKNTASRAPRQPTIVFSALQALTDRFCGEISDD
KISLYSFFPDEYFTCPSVCLSCNVRCKNGMNHQKDRLPHSADGLCQYAHQYNNKVLICKK
CYEGGREVIVVPKTSAASDNPWLGLAKYAWSGYVLECPFCGIIYRSRQYWMGNQDPESSV
VRPEVKHVWQGSEAFQTDHQNAAQRVLDGVNYVLQSVSEYSSGPTKAVTAWITDQVAPPY
WRPNAEIMECHGCKRMFEEAERKHHCRACGEGFCQACSTRSMPVPERGWGRSPVRVCDAC
HQRVGATQVIQVVQTEPKTLVARRVTEMAQSTLNMVSTAVDYPLCFVKGVARPEYWVPDH
EITQCHQCAKEFSPSASKHHCRSCGQGVCGGCSTQCRPVPSRGWDHPVRVCDACVTQLDN
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaggagatggggatgtaatcatgtcggaaatgctgctgaaagaaatggaagcg
gtgtctctcggtccctgtttggaggtagaagagccggagagcggacggagctttctttta
attgatgaaaacgaaactctgcaggtaaaagatgaagcccacttcctgaaaaaactgggc
tgcagcgccggacaaggagtcaaagtcctctccatctttggcaacaccggcgatggcaaa
tctcacacgctaaaccacgtgttgttcgagggcgaggaagtgttcgccacctctccctcg
cccggctcttgcaccgtcggcgtctgggctgcttacgagccccgcctgggactggtcatt
ctggacacggagggtttgctcggtgcttctacgcagcagaatcagcgaatgcgcctgctg
ctaaaggtgctggctgtgtccgacgtggctttgtaccgtacacgggccgagcggctgcac
aacgacatgtttcacttcttgggaagtgcttcagctgcttatttgaagtacttcacaccc
cagcttcgagccctctccagccgatgcgggctggacgtacctctttccaatctaggcccg
gccgtggtggtgttccaggaaacctcacgcactcagctgctgggtcatgacagaacagtc
ccggctgatgttgtgcttcagaagcgtttccatgacctgggtctgagcacagaagccttc
agctcggtgcagtatgtgggcacacagaccatcacacctccaacagacttctctcagtta
ctggataccatcaaaatgcaggtgaaaaacacagcctcacgagccccccgacagccgact
atcgtcttcagtgcactgcaggccctgactgatagattctgtggggaaatctccgatgac
aaaattagcctgtactccttttttccggacgagtatttcacctgcccttctgtctgcctc
agctgcaatgttcgctgtaagaatggcatgaaccaccagaaggacagactgccacactca
gcggatgggttatgccaatacgcccatcaatacaacaacaaggtccttatctgcaagaaa
tgctatgaaggtggacgggaggtaatagttgtgcccaagacatctgctgcttcggataac
ccatggcttggtctggcaaaatatgcctggtcggggtatgtactggagtgtccgttctgc
ggcatcatctaccggagcaggcaatactggatggggaatcaggatccagagagcagtgtg
gtacgcccagaggtcaaacatgtctggcaggggtcggaggctttccagaccgaccatcag
aacgcggctcagagggtgctggatggagtgaactacgtcctccagtctgtatcggaatac
agctccggccccaccaaagcagtcacagcctggatcacggatcaggtggctcccccgtac
tggagacccaatgcagagatcatggaatgccatggctgtaagcggatgttcgaggaggcg
gagaggaagcaccactgccgagcgtgtggcgagggtttctgccaggcctgctccacccgc
agtatgccagtccctgagaggggctggggcaggagccctgtgcgagtttgtgatgcctgc
catcagcgggtaggagctactcaggtcatccaggtagtgcagacagaacccaagaccctg
gtggctcgcagggttaccgaaatggcacagtccacgcttaacatggtctccactgcagtg
gactaccctctctgcttcgtaaagggggtggcacggcccgaatactgggttccagaccac
gagatcacacagtgccaccagtgcgccaaggagttcagcccgagcgcgtccaagcaccac
tgccgctcgtgcggtcagggtgtatgtgggggctgctcgactcagtgccgtcccgtgccc
tcccgcggctgggaccatccggtgagggtgtgtgatgcctgtgtgacccaattagacaac
cagtga
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