Trichomycterus rosablanca: 134334496
Help
Entry
134334496 CDS
T09921
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134334496 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134334496 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134334496 (usp16)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134334496 (usp16)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134334496 (usp16)
Ubiquitin system [BR:
trn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134334496 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
CCDC53
Motif
Other DBs
NCBI-GeneID:
134334496
NCBI-ProteinID:
XP_062872903
LinkDB
All DBs
Position
20:complement(28176130..28184814)
Genome browser
AA seq
832 aa
AA seq
DB search
MGKKRAKNKAKSPREDSSVDLIEVKCGHIRKGVEHSWLRKAALEKNWNTCQGCEQERKQS
EAQTEDEDQGEAQTIWTCLKCGHRGCGRFSNHKHAIKHYEKAHSDPHCLVLSLDNWSVWC
YICDDEIQYSSTGRLAQLISNIKRHTLEGPGHRSSRKLKDEDNTVGDTAEENAPQKEPEP
KEEPKEIKKTGEAPNGPEPCTGAVPVRGLSNLGNTCFFNAVVQNLSQTWLLRQLLCGLRD
EESSVVITPSSSSQLDPLQVRLSRPGPLTLAMCQLLNEIQETKRNVVTPQDLFTQVCKKA
ARFKGFQQQDSQELLRYLLDGMRNEENSRVTAGISEALKGSAEGSEALQRKLLKDYESAG
TRTLVERVFGGETTSTVMCKVCRTVSVVTESFLDLSLPVADEAYRKKKAAPQTSKERVDG
GRGPEPPDATETEDVLTGAGSKYQQKKAKKQARKQAKNQRRQQKPGAKLTLDSLTDDGAA
GEGEPGDPESVGGADEPRSQSEPEELNHHNPAEEEEEEEKEEEGSPASNRFSSLSEERVN
DERDEMEEAELSRKVRELSLTSEEKQNESVESGPRAESEAESGPRAESRPQVESQAESVP
QAESEAESEMESEAESEAESEAATGPEFVIVNQDPELAFSSLASRAAVSSSQCSVESSLH
QFTQVEELSDTNSLLCVTCSRRDGQGDKKKIYREALKQMLISSPPPVLTLHLKRFQQVAY
SVCKVNRHVQFSQVLDLAPFCSIHCKEVQNEQTQLLYSLYGIVEHSGTMRSGHYTAFIKS
RAHSGAADPREAGEATPPKGSWFHVSDSSVTPVPESRVLNSQAYLLFYERIS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagcgagcaaagaacaaagccaagagtcctagagaggacagctctgtggac
ctgatagaagtgaaatgtggacacatccgtaagggagtggaacacagctggttgaggaag
gctgctctggagaagaactggaacacgtgtcaggggtgcgaacaggagaggaaacagtcc
gaggctcagacggaggatgaggaccagggggaggcacagacgatatggacgtgtctcaaa
tgtggacacaggggttgtgggaggttctcgaaccataaacacgccattaaacactacgag
aaagctcattctgacccgcactgcctggtgctgagcctcgacaactggagtgtgtggtgt
tatatctgtgatgatgagatccagtactccagcacaggacgactggctcagctcatctcc
aacatcaagagacacacgctggagggacccgggcacaggagcagcaggaaactaaaggac
gaggataacaccgtgggcgacacggcggaggaaaacgcgccccagaaagagccggaacca
aaagaagaaccgaaagaaatcaagaagacgggcgaggcaccgaacgggccggaaccgtgc
accggggctgtaccggtacgaggtctcagcaacctgggcaacacgtgcttcttcaacgca
gtggtgcagaatctgtcacagacgtggctgctgcgtcagcttctgtgtggtttacgggac
gaggagagcagtgtggtgatcacgccgtcgtcctcctcccaactggatcctttgcaggtc
cgtctgtccagacccggcccgctcactctggccatgtgccaactgctgaacgagatccag
gagaccaaacgtaacgtggtgacgccgcaagatctcttcacacaagtgtgcaagaaggcc
gcgaggtttaaaggctttcaacagcaggacagtcaggagctgctgcgctacctgctggac
ggcatgaggaacgaggaaaacagccgggtcaccgccgggatttcggaggcgctgaagggt
tcggctgaaggttccgaggcgctgcagaggaagctgctgaaagactacgagagcgctggg
acccggaccctggtggagcgagtgttcggaggagagaccaccagcaccgtcatgtgtaag
gtgtgcaggacggtttccgtggtgaccgaaagcttcctggacctgtcgttaccggtcgca
gatgaggcgtacaggaagaagaaagccgctcctcagacgagtaaagaacgcgtggacggc
gggcgtggccccgaacctcctgacgccaccgagactgaggacgtgctgacgggcgccggt
agcaagtaccagcagaaaaaggctaagaagcaagcgaggaaacaggcgaagaaccagcgg
cggcagcagaaaccgggcgccaaactcacgctggactcactgaccgacgacggcgctgca
ggggaaggggaaccgggggatccggagagcgtgggcggggcagacgagcccaggagccaa
tcagaacctgaggaattaaatcatcacaaccctgctgaagaggaggaggaggaggaaaag
gaggaggagggaagccccgcctctaatcgctttagcagcctatcagaggagagagtgaat
gacgagagagatgagatggaggaggcggagctgagccgaaaggtgcgagaactgtcgctt
acatccgaagagaagcagaacgagagcgtggagtccggaccccgggcggagtcagaggcg
gagtccggaccccgggcggagtccagacctcaggtggagtcacaggcggagtccgtaccc
caggcggagtcagaggcggagtcagagatggagtcagaggcggagtcagaggcggagtca
gaggcagcgaccgggccggagttcgtgatcgtgaaccaggatcctgaactcgccttctcc
tctctggccagcagggcggcggtgagcagctcgcagtgttcggtggagtccagtctccat
cagttcactcaggtggaggaactgagcgacaccaacagcctgctgtgtgtcacctgcagc
cggagagacggtcagggtgataagaagaagatctacagggaggctctgaagcagatgctg
atctcgtctcctcctcctgtcctaactctgcaccttaaaaggttccagcaggtggcgtac
agtgtgtgtaaagtcaacaggcacgtccagttttctcaggtgctcgacctcgccccgttt
tgctccatacactgcaaggaggtgcagaacgagcagactcagctcctgtactctctctat
ggtatagtggaacacagcgggacgatgcgctccggtcactacaccgccttcattaaatcc
cgagctcacagcggcgctgcggatcctcgtgaggcaggtgaggcgacgccccctaaaggc
tcctggttccacgtgagtgacagcagtgtgacgccggtacctgagtcccgggtgctgaac
tctcaggcgtacctgctcttctacgagaggatctcctaa
DBGET
integrated database retrieval system
