Trichomycterus rosablanca: 134334582
Help
Entry
134334582 CDS
T09921
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b
KO
K14948
polypyrimidine tract-binding protein 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134334582 (ptbp2b)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134334582 (ptbp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
134334582
NCBI-ProteinID:
XP_062873024
LinkDB
All DBs
Position
20:complement(2088558..2107142)
Genome browser
AA seq
538 aa
AA seq
DB search
MDGIVSDVAVGVKRGSDDLLVGSLYSSQNSSLTANGSDSKKLRVEDGMENPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVTYYTAVTPQVRNVP
VCIQYSNHKELKTDSALNQRAQAVLQAVCAVQEGGSPSLDSAAESVLIPAPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAADGQPAVDPVMAAALGKDSTSLLGSPS
GTVASYSSAGTVTASLGSISPLSAAAAAAAAAGRVALSGHLVSGGVLLTSNLNEEMVTPQ
SLFTLFGVYGDVQRVKILYNKKDSALIQMTDGNQAQLAMSHLNGQKMFGKIIRVTLSKHQ
TVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDKVTEDDLRL
LFSNSGGTVKAFKFFQDRKMALLQMGTVEEAIQCLIDLHSYDMGRGHRLRVSFSKSTI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgttagcgatgttgcagttggtgtgaagagaggttctgatgatttgctc
gtcggcagtctttacagcagtcagaattcttcactcacagctaatggaagcgacagcaaa
aaactgagagtggaggacggcatggagaacccaccatccagagtcattcacatccgtaag
cttccaaacgaagtttctgagacggaggtcatcgctcttgggctgccctttggaaaagtc
accaatatcctcatgctgaaaggaaaaaatcaggcgtttttggaactggggacggaggaa
gcggcgatcaccatggttacctactacacagcagtgacgcctcaagtgagaaacgttccc
gtgtgcatccagtactccaaccacaaagagctcaaaacggacagcgctctcaatcagcgt
gcccaggccgtcctgcaggccgtgtgcgccgtccaggagggcggctcaccgagcttagat
tcggccgcagagagcgtgttgatacccgccccgagtccggtcctgcgcatcatcatcgat
aacatgttctacccggtcacgctggacgtactgcagcagatcttctccaagttcggaacc
gtcatgaagatcatcacgttcaccaaaaacaaccagttccaggctctgcttcagttcagc
gatcctgtaaacgcacagcaagccaagctgtctctggacggacagaacatctataactcc
tgctgcacgctgcggatcgacttctccaaactggtcaacctgaacgtcaagtacaacaac
gacaagagtcgggattacaccaggcccgagcttccggcagcggacggacagcccgccgta
gatcccgtcatggccgccgcgctcggaaaggactccacgtctctgctgggttctccatct
ggaactgtagcctcctactctagtgctggaacagttacagcttctctaggctccatcagt
cctctgagcgcggcggcggcggctgcagcggcggcgggtcgggtggctctgtcgggacac
ctggtgagcggcggcgtgctgctgaccagcaatcttaatgaggagatggttacgccccaa
agtctctttaccctcttcggtgtttacggggacgtgcagcgggtcaagatcctctacaat
aagaaggacagcgccctcatccagatgacggacggaaaccaggcgcagttagccatgagc
cacctgaacggacagaagatgttcgggaagatcatccgcgtgactctttccaaacaccag
acggtgcagcttcctcgagaaggtctggacgaccagggcctcaccaaagacttcaccaac
tcgcccctgcaccgcttcaagaagcccggctccaagaacttccagaacatctttcctccg
tcggccacactccacctgtctaacatacctgataaggtgaccgaggacgacctgagactc
ctcttctccaactctggaggcacggtgaaggccttcaagttctttcaagaccgtaagatg
gccctgctgcagatggggacggtagaagaggccattcagtgcctgatcgacctgcatagc
tacgacatggggcgtggccaccgcctccgagtctccttttccaaatctaccatctga
DBGET
integrated database retrieval system
