Trichomycterus rosablanca: 134334767
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Entry
134334767 CDS
T09921
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc)
KO
K04646
clathrin heavy chain
Organism
trn
Trichomycterus rosablanca
Pathway
trn04142
Lysosome
trn04144
Endocytosis
trn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134334767 (cltcb)
04142 Lysosome
134334767 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134334767 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134334767 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134334767 (cltcb)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
134334767 (cltcb)
Exosome [BR:
trn04147
]
Exosomal proteins
Proteins found in most exosomes
134334767 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
134334767
NCBI-ProteinID:
XP_062873287
LinkDB
All DBs
Position
20:23289058..23321492
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDLSDPNS
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISPKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITSVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDADRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GHAAAQSGNWEDLVKFLLMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGNEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPADAWKESQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQSHNNKSVNEALNNLFIVEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLQWFLQE
NKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVEKLDVSESLR
KEEEQNTEAQPIVYGTPQLMLTAGPSVAVPPQQPYGYGYAAPAGYGQPAQPGFSYGM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatattaccgatccgctttcaggagcacctgcagctccagaacctgggcata
aacccagcgaacatcggcttcagcacgctcaccatggagtccgacaagttcatctgcgtg
cgggagaaagtgggcgagcaagctcaggtagtcatcatcgacttgagtgaccccaactcg
cccattcgccggcccatctcggctgatagcgccatcatgaacccagccagcaaagtcatc
gccctgaaagccgcgaaaaccctgcagatttttaacatcgaaatgaagagcaagatgaag
gctcacaccatgactgacgatgtgacgttctggaagtggatctccctcaacaccgtagcg
ctggtgactgataacgccgtctaccattggagcatggaaggagattcgcagcccgttaaa
gtcttcgaccgacactcgagcttggccggctgtcagattattaactaccgcactgacgcc
aaacagaaatggcttcttctcatcggcatttctgcacagcaaaaccgcgtggttggagcg
atgcagctttactccgtagatagaaaagtctctcagccgattgaaggccacgccgcaggc
ttcgcccagttcaaaatggagggaaacgctgaagaatccacactcttctgctttgccgtg
cgcggtcaagctggaggaaagctgcacattattgaagttggaacccctccgactgggaat
cagccttttcctaagaaggccgtggacgtcttcttcccacccgaggctcagaacgacttc
ccagttgctatgcagatcagccccaagcaggatgtcgtctttctcatcaccaaatacggc
tacatccacctgtacgacctcgaaactggcacctgcatatacatgaaccggatcagtgga
gagaccatctttgtcacggctccacatgaagcaacttctggcatcattggggtcaacagg
aagggacaggtgctgtctgtgtgtgtggaggaggaaaacatcatcccctacatcaccagc
gtgctccagaaccccgacctggccctgcgcatggccgtacgcaacaacctggccggcgct
gaggagctcttcgcacgcaagttcaacacactcttcgcagggggcaactactcagaggcc
gccaaagtggccgccaacgcaccaaagggcatcctgcgcaccccggacactatcagacgt
ttccagagcgtgccggctcagccaggtcagacctctccactgctgcagtacttcggcatc
ctgctggatcagggacagctgaacaagttcgagtcactggagctgtgcaggccagttcta
cagcagggtcgcaagcagctactggagaagtggctgaaggaggacaagctggaatgttca
gaagagctgggtgatttggtgaagtccgtagacccgacacttgctctcagcgtctaccta
agagcaaacgtccccagcaaagtaatccagtgcttcgcagaaaccggccagttccagaaa
attgtactgtacgcaaaaaaggttggctacactccagactggatcttcctgcttcgaaac
gtgatgcggatcagtccagaacagggtcttcagttctcccagatgctggttcaggatgag
gagccgctggctgacatcacccagattgtggacgtgttcatggagtataacctgattcag
cagtgcacctcatttctgctggatgccctgaagaacaaccgtcccactgagggtcctctg
cagactcgcctgctggagatgaacctcatgcacgcacctcaggtggccgatgccattctg
gggaaccagatgttcacccattacgacagagcacatgtggcacagctgtgcgagaaggcc
ggattgttgcagagagccctggagcattacactgacctgtatgacatcaaacgcgcagtg
gtgcacacccacctgctcaaccctgagtggctggtgaacttcttcggctcgctgtcagtg
gaggactctctggagtgcctgagagccatgctgtccgccaacattcgtcagaacctgcag
atctgcgtccaggtggcctccaaataccatgagcagctcaccacacagtccctcaccgag
ctcttcgagtccttcaagagcttcgaaggtctgttctacttcctcggctccattgtaaac
ttcagccaggatccagaggttcatttcaagtacatccaggcagcttgtaaaaccgggcag
attaaggaggtggagaggatctgcagagagagtaactgctatgatgccgatcgtgtgaag
aatttcctgaaggaagccaaactgaccgatcagctgcctctcatcattgtgtgtgaccgc
ttcgacttcgtccacgacctggtcctttatctgtaccgcaacaacctgcagaagtacatc
gagatttacgtgcagaaggtcaacccaagccgtcttccagtggtaatcggtggcctgttg
gacgtggactgctccgaggatgtcataaagaacctgatcctggtggtccgaggccagttc
tccaccgacgagctggtggctgaggtggagaagaggaacagactgaagctgctgctgccc
tggctggaggcacgtatccatgagggctgtgaggaacctgctacccacaatgccctggct
aagatctacattgacagcaacaacaaccctgagcgattcctcagagagaacccttactac
gacagccgtgtggtgggcaagtactgcgagaagagggatccacatctggcctgtgtggct
tacgagagaggccagtgtgaccaggagctcataaatgtgtgcaatgagaactccctgttc
aagagtctgtctcgatatctggtgcgccgtaaggaccccgagctgtgggccagtgttctg
ctggagagcaacccctacagaaggccactgattgatcaggtggtgcagactgctctgtct
gagactcaggatccagaggaggtctctgttacagtcaaagccttcatgaccgctgatctg
cccaatgagctcatcgagcttctggagaagatcgtcctggacaactctgttttcagtgag
cacaggaacctgcagaaccttctgattttaacagccatcaaagctgaccgcactcgtgtg
atggagtacatcaatcgcttggataactacgacgcccccgacatcgccaacatcgccatt
agcaatgagctctttgaggaggcttttgccatctttagaaagtttgatgtcaacacatct
gcagtgcaggttctgattgaacacatcggcaatctggacagagcttacgagtttgctgag
cgctgcaatgaacctgctgtgtggagccagttggctaaagctcagctgcagaaaggcttg
gtgaaggaagctatcgattcttacatcaaggctgacgatccttcagcttacatggaagtg
ggccatgctgctgcccaaagcggaaactgggaggatttggtgaaattcttgttgatggca
cgcaagaaggctcgcgagtcctacgtggagaccgagctgatctttgctctggccaaaacc
aaccgcctggctgaactggaggagtttattaacggcccgaacaacgctcacatccagcag
gtcggcgatcgatgctacgatgagaagatgtacgaagcggctaagctactgtacaacaac
gtgtctaactttggccgcctggcttccactctggtgcaccttggggagtaccaggctgct
gtggacggagcccgcaaagctaacagcacacgaacctggaaggaggtctgctttgcttgt
gtggatggaaatgaattccgtctggcccagatgtgtggtttacatatcgtcgtccatgct
gacgaactggaagagctgatcaactactaccaggatcgtggctactttgaggagctgatc
accatgcttgaagctgctctgggactggaacgtgctcacatgggcatgttcaccgaactg
gccatcctgtattctaagttcaaaccccagaagatgagggagcacctggagctcttctgg
tccagagttaacattcccaaggtcttgagggcggcagaacaagctcacctgtgggccgag
ctggtcttcctgtacgacaagtatgaggaatacgataatgccatcatcaccatgatgaac
cacccagcagatgcctggaaggagagccagttcaaagatattgtgaccaaggtggccaat
gtggagctgtattacaaagccatccagttctatctggagttcaagcctctgttactgaac
gacttgctgatagtgctgtctccaaggctcgatcacacacgcgccgtcaacttcttcagc
aaggtaaagcagttgcccctggttaaaccgtatctgcgatctgtacagagccacaacaac
aaatcggtcaatgaagcactgaacaatctcttcattgttgaggaggattaccaggccctg
cgcacgtccatcgacgcctacgacaacttcgataacatctcgctggctcagagcctggag
aagcacgagctcatcgagttcaggagaattgctgcctaccttttcaaaggaaacaaccgc
tggaagcaaagtgtggaactctgcaagaaggacaaactctacaaggatgccatgcagtac
gcctccgagtcgaaggacatcgagctggcagaggagctgctgcagtggttcctgcaggag
aacaagaaggaatgcttcgccgcctgcctcttcacctgctacgatctgctgaggcccgac
gtggtgctggagacggcctggaggcacaacatcatggacttctccatgccttacttcatc
caggtcatgagggagtacctcagcaaggtggagaaacttgatgtatccgagtccttgagg
aaagaggaagaacagaacactgaggcacaacccatcgtttatggcacaccccagctcatg
ctgaccgcaggcccgagcgtcgctgttcctcctcagcagccttacggctacggttacgcc
gcccccgccggctacggccagccagcacagcccggcttcagctacggcatgtaa
DBGET
integrated database retrieval system
