Trichomycterus rosablanca: 134334790
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Entry
134334790 CDS
T09921
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
trn
Trichomycterus rosablanca
Pathway
trn03320
PPAR signaling pathway
trn04148
Efferocytosis
trn04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134334790 (rxrga)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134334790 (rxrga)
03320 PPAR signaling pathway
134334790 (rxrga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134334790 (rxrga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
trn03310
]
134334790 (rxrga)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
134334790 (rxrga)
Nuclear receptors [BR:
trn03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
134334790 (rxrga)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
DUF3043
Motif
Other DBs
NCBI-GeneID:
134334790
NCBI-ProteinID:
XP_062873316
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Position
20:complement(1747726..1760008)
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AA seq
440 aa
AA seq
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MQMDQIEFMRLTGSSVQMNHSHPRTPHSHPSMLTHLHSSVISGLASPYSITTSSPYSITS
SSLGSITSSVHPTPDMGFSPQLNTLGTTVDVKPHEQMNQSYCCISPGSLSKHLCSICGDR
SSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNRCQYCRYQKCLATGMK
REAVQEERQRGRDKNDNEVDSSGTLNEDIMPVEKILHAELAVEPKTEADIQTSADNINND
PVTNICQAADKQLFTLVEWAKRIPHFSQLPLDDQVILLRAGWNELLIASFSHRSVSVNDG
IVLGSGLHVHRSSAHTAGVGSIFDRVLSELVSKMKDMQMDRTELGCLRAIVLFNPVDAKG
LSSVCKVEALREKVYASLESYTKHRYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLI
GDTPIETFLMEMLETPHQIT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggatcagatcgagttcatgcgtctgacaggttcttcagtacagatgaaccac
agtcacccgaggactcctcactcccatccatccatgctaacacacctccactcatccgtc
ataagtggcctggcatcaccctactccatcaccacctcatcaccctactccatcacctcc
tcatcactgggctccatcacctcctccgtgcaccctacaccagacatgggcttcagtcct
cagctaaacacactgggcaccacagtggatgttaaacctcacgagcagatgaatcagagc
tactgctgtatcagtcctggttctctgtccaaacatctctgttccatctgtggagatcga
tcatcagggaaacattacggagtgtacagctgtgaggggtgtaaaggtttcttcaagagg
acggtgaggaaggacctgacgtacacgtgccgcgacagtaaggagtgtctgatagataaa
cgtcagaggaaccgctgccagtactgccgttatcagaaatgcctggcaacgggcatgaag
agggaagctgtgcaggaggagcggcagcgcggccgagataaaaacgataacgaggttgat
tccagcggcactctgaatgaagacatcatgccggtggagaagattctacacgctgaatta
gcagtggagcccaaaactgaagcggacatccagactagcgccgataacataaacaacgac
cccgtcaccaacatctgtcaggcggcggataagcagctgtttacgctggtggagtgggca
aagcgcatcccacacttctcacagctacctctagatgaccaggtcatccttctgagagcg
ggctggaacgagctcctcatcgcatcgttctctcatcgctcggtgtcggtgaacgacggc
atcgtgttgggttccggtctgcatgtccatcgcagcagcgcccacactgcaggagtggga
tctatattcgacagggttttatctgagctggtatctaagatgaaggacatgcagatggac
cggacagagcttggctgtctcagagccatcgttttatttaacccagtagatgctaaagga
ttatccagcgtgtgtaaggtggaggcgctcagggaaaaagtttatgcctccctggaatcc
tacaccaaacacagataccccgagcagcccggcaggtttgcgaagctgctgctgcgactg
cccgctctccgttccatcggcctcaagtgtctggaacatcttttcttttttaagctcatc
ggtgatacgccaatagaaacgtttcttatggagatgctggaaaccccacaccagatcaca
tga
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