Trichomycterus rosablanca: 134334858
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Entry
134334858 CDS
T09921
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn03440
Homologous recombination
trn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134334858 (brca2)
03460 Fanconi anemia pathway
134334858 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134334858 (brca2)
03036 Chromosome and associated proteins [BR:
trn03036
]
134334858 (brca2)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134334858 (brca2)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
134334858 (brca2)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
134334858 (brca2)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
134334858 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
134334858 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
FAM70
Motif
Other DBs
NCBI-GeneID:
134334858
NCBI-ProteinID:
XP_062873396
LinkDB
All DBs
Position
20:3828543..3864270
Genome browser
AA seq
2988 aa
AA seq
DB search
MFDDFFTRIETELGPLNPDWFEELTAKASKDGSENLAVIEDVASSHKHKCSFKAQVEELI
PGSQMCSTPKVFRCLQQHSPDSVTGEFSGLQSPCPVLPGPESSPCLFGSTKDSKQCEKGW
GSLKSNGCFDLLDTPKSLLPQESSARRICESLGAQLNPDLSWSSSFNTPSSLSPTVLLSK
KEPLTSPVSFRRDTEVIFVRKLFPSLSKGPDSACLTAQHNDINLLFTVSYVNSQHNKQKS
DSSSDSTGEDWRQTVPDAIKDNDVRNTVENVLDGAEDVLSIFFSNSGSALRRVKSKERTK
RRVNGLTKEVKSNSVTVENTTEKDVSTTDRCTAAATKSPLFSNPPYNKSFTQWTPLSLSD
VQEPKANQVCTSELSAKCNSLTSFNDDSTQRDEDCTVQQSPSCSYQRNTLSLDSQRSQVQ
GSLLNVSAALTFSKNPRKFVYRVKSSTSRRGKQNVTPAGSSRSVTDISNEKHYNEDMDAE
GHFLQPADSLINQDNPATHNMDHDLDTTQLCKAFAEDFTQEACQKSEKSPNKSVSDCTTM
EISDVRAKPDLEEFCKTGFDPQDFQSNCKETSAEDTNLINEQKMESTNCESLKHDSGYPA
DSSRESLLVSGSERLHSGFKTANNKPEAIIKTKAMLDESFELMTGTVGSTMSSCRPVLAS
TARDERPLEQETSDFISAGTISSSDTVSEKTPCPSVCKTTNCAFKTASNQSITVTSANLE
KAEGMFKECEEENVSSRVSNTGKVTDQVQNAIKDVKSNLNGQDTSKYSTHNDADGNWTLT
ASQKADVSELCSLLEEASSQYEFTQCRNAKSSTKSQDGAQFEKDWDPDMLAGIDFDDSFH
SDFGRQMSRKNQAKADSPVPHTRVLNSVSDGGVFIKDINVSDSQRNSLGTGNVKQCSDDA
SQNLSDGSGFKTTSDNVQSVSEKCSSKSRSPDLEDSEEVNTVDQKENPSVDYCGKSHTTA
KEFHGELNSEVNENTSLPMKDGKQTCGEIRLDSKQEDWESNLLHRSTGSGFRTAGGKEVK
ISEKALQDANELLNEVTFSEEPSYSTNKVDPKPKAVSWSKPALQSPSDTVADVVHDSANA
IKKHKSENRTEMKQTAYRTPRSVQGAEFKRTGGKRTTDFTGDVHKSKSLLKDIDGNLESF
DETKLKQGNMKFYAESDPNQHACVNGFKLASGKGVSYSEKAFTKAKALFKDCDPDGSDIC
REKGDETSVMDDSGFQAVSGNMAHLSAIDRETLCFKKETPVWTETSQRKFSKTSAEPLEH
TSGCGFSTASGTEVSVSSEALQRDKVMFEDSNAALACEKSLEISEKMIVQEKRVGSNVPE
QACGFSTASGKSVAVSDKALKKARSLFTDCEVDGLAPDANLTAKRSGADLRIPRTFSTTC
EKGDLEKSLMEDKSGNVVPGGSLGFSTAGGRKIALSDKALEKAKSLFVGCKVDDLTSDEG
LAGNTDPQISNGAPFSTEGDQEAAVLAKSLNKMNNSLSEYSSDAQPCGTRVRVLEDEAVP
KKQTTVSGGSLGFSTASGKKVAVSEKALKKARSIFTDCEVDGLAPDANLTTKRSGADLRI
PRTCLPFSTTCEKGDLEKSLMEDKSGDMVPGGSLGFSTAGGRKMALSDKALEKAKSLFVG
CEVDDLTPDPKISNGAPFSIEGDQEASVSDKSLNKMNNSTFGYSSDAQPCGTIVRVLEDE
AVPKKQTTVSGGSFGFSTASGKKVAISEEALQNAKRRFIDCETDDLANNESLSVKKSFAD
RLKIPNETSLSFSTSSRKGVAVVEKSPHESLLSIPDDEKNSHGKDFPTENGSEPVNPKRF
EEKHEDLVCRASKADQFGSGNFGFSTASGKGVSVSKSAIQAAFEMFRDCDRQDTNDQSQT
TITSGCQSAKTTKQCTPFVPKTNTMNQTEATDSSLHVQATQNNPLIDCNPLKLDGCTVTQ
QKYFEQEAMACTKALLEDDLNEHGLLGTQKSAGSGNLVPQEQICPEGKTGQRKRTSDDRN
VTAQPPLKRRLISEFDQFSDERRVCTPVNSSPNGTLRDRRVFKYNIQLKPNVTYPARDVQ
NQQTTYSDHQKRSSDPQKPSVFMPPFRKNVKPEMAKNNMPTNVDQTASVFVPPAKKEKSD
HGRSSPQISTDSDSLLISSSSSGNKIEKGETAIKKEEKRDQTTVPCETKVTWQQSVELAR
DMQDMRLRKKKRQKIRPLPGTLYLAKTSGVARNSLGEAVQYRNPLQHTKEELYRFGVKSS
VFRISSENAESFRFSCNDFFKPEQFTETGGVQLADGGWLIPDSEGSLGKDEFYKALCDTP
GVDPKLINEAWVYNHYRWIVWKRASMERAFPETMGGRCLNPEQVLLQLKLRYDVEVDHSR
RSALKKIMERDDTPAKTLVLCVCGVAKSHPSEESSEKPTDSTDTKAAAIVWLTDGWYSIK
ALLDLPLSTMLQRGRLEAGVKLIIHGAELIGSQDACPPLEAPDSLMLKISANSTRRARWD
TKLGFYKDPRPFPLSLSTLYPNGGVVARVDIVALRSYPTQWMEKRPGGVFVFRNERAEER
EAARHNSAKQKTMELLFSKIQVQFEKEEEVKEKNRRSKVFSRREIENLQDGEKLSEAMEN
DAAFVETSLSTQQVKAVSSYRRNLAEQRRSELQERLHKAVLEAEGDGAARVVTPVWKLAI
ADSNDLHGKCVYTLNIWRPTEELRSLLREGCRYKAYHLATSETKKRTGIANIQFTATKKT
RFQDVEVRPEWLSLHFPARESTCLRDLQNPKFYSPCGEVDVVGYAITILDRQGTSPVLYL
VDEKLDFVSVRICSSLTHLALEDLVKPLALLAVSNLQIRQLSGSIPGLYAGEQALFSTHP
KETHLQQAVARLKIFAEGYEHFLIIAEEKLSNLIPTGVLNSCESPRTPALPKSNVKMNVT
PQQARVLSPFTPVAKKTPTASANSESKDPRSGKRKRGLDYLSRLNSPAPLLSLGMVHSPR
VSKTFNPPRRCGTTHSPSQTDSNPPSVDKQWVNDEELAMINTPTLLDG
NT seq
8967 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgacttcttcactcgaattgaaacagagcttggaccactgaacccagactgg
tttgaggagttgactgcaaaagcgtctaaagatggcagtgagaacctcgctgtcattgag
gacgtcgcctcgtctcataaacacaagtgcagcttcaaagcacaggttgaggagctcatc
ccaggaagccagatgtgttcaacacctaaagtgtttaggtgtttacagcaacattctccg
gactctgttactggggaattttcaggattgcagagtccatgtcctgttctgccaggtcca
gaatcaagcccgtgtctgtttgggtccacaaaagacagcaagcagtgtgagaaaggctgg
ggatcattaaagtcaaatgggtgctttgatttgctcgatacacccaagagtttactgcct
caggaatcgagtgcacggcgcatctgtgagagtcttggagctcagttaaatccagatctg
tcgtggagcagttccttcaacaccccgtcatcactgagccccactgttcttttgtctaaa
aaggaacccctgacttcaccagtaagttttcgcagggacacagaagtcatttttgtacgg
aagctgtttccatctctctcaaaaggtccagattcagcatgtctgactgcccaacacaac
gatattaacttattatttacagtatcatacgtgaacagccagcataataaacagaaatcg
gattcatcgtctgacagcacgggtgaagactggaggcagaccgtaccggacgcaataaag
gacaacgacgtgcggaacacggtggagaacgttctcgatggtgccgaggatgttttgtcc
atcttctttagcaacagcggctcggctcttcgccgagttaaatccaaggagaggacgaaa
agaagagtgaacggtttaaccaaggaagtaaaatctaattctgtgacggtggagaacact
acggaaaaggacgtaagcacaaccgaccgctgtacagccgccgcgacgaaatctcctctg
ttttcaaacccaccttataataaaagctttacacagtggactccactgagtttatctgat
gtgcaagaaccaaaggcaaaccaagtctgcacctcagaattatcagctaagtgcaatagt
ttaacatcatttaacgacgactcgacacagcgtgatgaggactgtaccgtacaacagtcc
ccttcctgctcttatcagagaaacactctctccctcgactctcaaagatctcaggtacaa
ggttctttgctgaacgtgtctgctgcacttaccttctcaaaaaacccgaggaagtttgtt
tatcgtgtaaaaagttcaaccagcaggcgaggaaaacaaaatgttaccccagcaggatcc
tctcgttcagtcactgatatttcgaatgaaaagcactacaacgaagacatggacgctgaa
ggtcattttctgcaaccagcagattctctgattaatcaggataatcctgcaacccacaac
atggaccatgatcttgacacgacgcagctttgtaaagcttttgcggaggattttactcag
gaagcgtgtcagaaatcggaaaaatctcccaacaaaagtgtgtcagattgcacaacaatg
gaaataagtgatgtgcgggctaaaccagaccttgaagaattttgtaagactggttttgac
ccacaggacttccagagtaattgcaaggaaacatcggcagaagacactaatttgataaat
gagcaaaagatggaaagtacaaactgtgaaagtctgaaacatgacagtggttatcctgca
gattctagcagggaatctttattagtaagtggttctgaacgtcttcattctggattcaag
acggcaaataataaacctgaagccataataaagaccaaggcaatgttagatgaatccttt
gagcttatgactggcacagtcggttcaacaatgtcgtcttgcagaccagttttggcaagt
accgctagagacgaaaggccgttagaacaagaaacctctgattttatatcagctgggaca
atctcaagttctgatacggtttcagagaaaactccctgtccctcagtttgcaaaaccact
aactgtgcattcaaaaccgcatctaaccaaagtattactgtcacgtctgctaatcttgag
aaagccgaaggcatgttcaaggaatgtgaggaagaaaatgttagctctcgtgtgtcaaac
actggaaaggtcacagatcaagtccagaatgcaataaaagatgtgaaatctaacttaaac
ggtcaagatacatccaaatattccacccataacgatgctgacgggaattggactttgaca
gcctcgcagaaagcagacgtatccgagctgtgcagtttgttggaagaggcgagcagccag
tacgaattcacacagtgtaggaacgccaagtctagcacgaaatctcaggatggtgctcag
tttgagaaagactgggatcctgacatgcttgctggcattgactttgatgatagttttcac
tctgattttggaagacaaatgtcaagaaaaaaccaggccaaggctgattcgcctgttcca
cacaccagggtcttaaacagtgtctcggatggcggcgtatttattaaagatataaatgtc
agcgactcgcagcggaattcattgggaacgggaaatgtgaaacagtgctcggatgatgcc
agtcagaatttgtcagatggttctggttttaaaaccaccagcgacaatgtccaaagtgtc
tcggagaaatgttcgagcaagtccagaagcccagatttagaggacagtgaagaagtcaat
acagttgaccaaaaggaaaacccttcagttgactattgtggcaagtctcacaccactgcc
aaggaattccacggtgaacttaactccgaggttaatgagaacacgagcttaccaatgaaa
gacgggaaacaaacctgtggcgaaatacgtttggactctaagcaagaagactgggaatct
aatttacttcacagaagcacaggttctggattcaggaccgctggtgggaaggaagtaaag
atatcagagaaagctctccaggatgcaaacgaacttcttaatgaagtcacgtttagtgag
gaaccttcctacagcaccaacaaagtcgatccaaaaccaaaagcggtttcttggagtaag
cctgctctgcaaagtccatctgacacagtggcagacgtagttcatgattctgccaacgct
attaaaaagcacaagtctgaaaacagaacagaaatgaaacagacagcgtatcgaacgcct
cgatccgtgcaaggtgccgagtttaaaaggaccggtgggaaaagaacgacagatttcaca
ggtgatgttcacaaatcaaaaagccttttaaaagatattgatggcaatttggaaagcttc
gacgagaccaaattaaagcaaggaaatatgaaattttatgccgagtcagatccaaaccaa
cacgcgtgtgtcaacggatttaagttggcaagtggtaaaggagttagctattctgaaaaa
gcattcacgaaggcgaaagctctttttaaagactgcgatcctgacgggtcggatatttgt
cgagaaaaaggagacgagacaagtgtgatggatgactctggctttcaggctgtttcagga
aacatggcacatttgtctgcaatagacagagaaaccttgtgttttaagaaggaaacgcca
gtttggactgaaacctcgcaaaggaagttcagcaaaacctcagctgagccgcttgaacac
acgtcgggctgtggtttcagtacagcaagtggtacggaggtgtccgtttcaagtgaagct
cttcagagagataaggttatgtttgaggattcaaatgctgctttagcttgtgaaaaaagt
ctggaaatatcagaaaagatgattgttcaagagaagagggttggctccaatgttccagaa
caagcctgtggctttagtactgcaagtgggaaaagtgttgccgtatctgacaaggctctt
aaaaaagcaagaagtctttttaccgactgcgaagtggatggtttagcacctgatgcaaac
ctgactgcaaagagatcaggtgcagatctgagaatcccaagaacttttagtaccacctgt
gaaaaaggtgatttggaaaagtcactgatggaggataaatctgggaacgtggttccagga
gggagcttgggtttcagtacagcaggtggaagaaaaatcgcattatctgacaaggcgctc
gaaaaagccaagagtctttttgttggatgtaaggtggatgatctaacatctgatgaaggc
cttgctggaaatacagatcctcagatttcaaacggagctcctttcagcactgaaggggat
caagaggctgctgttttagccaagtctctgaataagatgaataattctttgtctgaatat
tccagtgatgcgcaaccttgtggaacgagagtcagagttttagaagacgaggctgtaccc
aaaaaacagactactgtttcgggaggaagccttggctttagtactgcaagtgggaaaaag
gttgcagtatctgaaaaggctcttaaaaaagcaagaagtatttttacagactgcgaagta
gatggtttagcacctgatgcaaacctaactacaaagagatcaggcgcagatctgagaatc
ccaagaacgtgtttgccttttagtaccacctgtgaaaaaggtgatttggaaaagtcactg
atggaggataaatctggggacatggttccaggagggagcttgggctttagtacagcaggt
ggaagaaaaatggcattatctgacaaggcgctcgaaaaagccaagagtctttttgttggc
tgtgaggtggatgatctcacaccagatcctaagatctcaaacggagctcctttcagcatt
gaaggggatcaagaggcttctgtttcagacaagtctctgaataagatgaataattctacg
tttggatattccagtgatgcgcaaccttgtggaacgatagtcagggttttagaagatgag
gctgtacccaaaaaacagactactgtttcaggaggaagctttggcttcagtacggcaagt
gggaaaaaggttgccatatctgaggaggcactgcaaaatgcaaagaggcgatttatagac
tgcgaaacggatgatttagcaaataatgaaagcctttcagtgaagaaatcatttgcagat
cgcttaaagatccctaatgaaacaagtttgtcttttagcacttccagtaggaaaggggta
gctgtggtggagaagtcaccacatgagagtcttttaagcattccagatgacgagaaaaac
tctcacggcaaagatttccctactgaaaacggatctgagcctgtaaatccaaaacggttt
gaagaaaaacacgaggacttggtttgtagagcctcaaaagctgatcagttcggatcagga
aattttggcttcagcacagccagcggaaaaggtgtgtctgtgtcaaaatcagccatacag
gcagctttcgagatgttcagagactgtgatcgacaagatactaacgaccagtctcaaact
accattacctctgggtgccagtctgcaaagactactaagcagtgtactccattcgtccca
aagactaatacaatgaatcagactgaagccacggattcatctcttcacgtacaagctaca
caaaataaccccctgatagactgcaatcccttaaagcttgatgggtgcactgtgacccag
cagaagtatttcgagcaagaagcaatggcctgcactaaagcacttttagaagacgatctc
aacgagcacggtttactagggacgcagaaatctgcaggtagtggaaatctcgttcctcaa
gagcagatctgtccagagggcaagactggacagagaaagcgaacatcagatgacagaaat
gtaacagcccaaccacctttaaaaagaagactaatatcagagttcgaccaattttctgat
gagagaagagtttgtacgcctgtgaacagcagccctaatggcaccctgagagacagaaga
gtcttcaagtacaacatccagttaaagcccaatgttacttatccagctagggatgtccaa
aaccagcaaacgacctactctgatcaccaaaagagatcatctgaccctcagaaaccctca
gtgtttatgcccccatttcgaaagaacgttaaacctgagatggcaaaaaataatatgcca
acaaacgtggatcaaactgccagtgtgtttgttccaccggctaaaaaggagaagagcgat
catggcaggagttccccccaaatttctacagactctgattccctgctgatctcaagctct
agttctggaaacaagattgaaaagggagaaacggcaataaagaaagaagagaagcgagat
cagaccactgtaccttgtgaaacaaaagtcacttggcagcagtctgtggaattggcacga
gacatgcaggacatgaggctcaggaaaaagaagcgccagaaaattcgacctctccctggc
accctttacctggcaaagacgtccggagtggccagaaattcactcggagaggcggtacaa
taccgaaacccacttcaacacaccaaggaagagctgtatcggtttggggtgaagagcagt
gtttttcgaataagcagtgagaacgcggaatcgtttaggttcagctgtaatgacttcttt
aaacctgagcagttcacagagaccggaggggttcagctggctgatggtgggtggctcatt
ccagatagcgaaggaagtctcggcaaagacgagttctacaaagctttatgcgacacccct
ggtgttgatcccaaactgataaacgaagcatgggtatacaaccactatcggtggattgtg
tggaaacgggccagcatggaaagagctttcccagaaaccatgggtggtagatgtctcaat
ccagagcaagtcctcctacagctcaaactcaggtatgacgttgaggtggaccacagtcgc
cgatctgccctgaagaaaatcatggagcgggacgacactccagccaagaccttagtgctg
tgtgtgtgtggcgttgccaaatctcatcccagtgaagagagttcagagaagcccacagac
tccactgataccaaagctgcagcgatcgtatggcttactgacggctggtactcgattaaa
gcactgctggaccttccactgtccaccatgctgcaaaggggtcgtctggaagcgggtgtg
aaactcatcatccatggtgcggagctgattggctctcaggatgcgtgtcctcctctagaa
gcccctgattcacttatgctgaagatttcagccaacagtacgagaagagctcgttgggac
accaagctcggtttctataaagaccctcgaccttttccgctgtcactttctacgctgtat
cctaacggcggagtcgtggctcgtgtggacatcgttgctttgaggagttaccccactcag
tggatggagaaaaggcctggtggtgtcttcgtgtttcggaacgagcgagccgaagagaga
gaggccgctcgccacaacagcgccaaacagaagaccatggagctcctgttctccaagata
caagtccagttcgagaaagaggaggaagtaaaagaaaaaaacagaaggagcaaagttttc
agtcggcgtgagattgagaacctgcaggacggcgagaagctatccgaagccatggagaac
gatgcagcttttgtggagaccagtctgagcacacagcaggtcaaggctgtaagtagctac
agacgaaatctggccgagcagaggaggtcagagctccaggagcgcctgcacaaagccgta
ctagaggccgagggggatggtgccgcacgagtcgttactcccgtctggaaactcgctatt
gctgactccaacgatctgcacggcaaatgtgtatatacgctgaatatctggcgacccact
gaggagttgcgttccttactgagagagggctgcagatacaaggcttatcatctggccaca
tcagagactaagaagcgcactggcattgccaacatccagttcacagccaccaagaaaaca
cggtttcaggacgtagaggttcgtccggaatggttaagcctgcattttccggccagagaa
tcgacgtgcctccgagatctgcaaaacccaaaattttactctccatgtggagaggtcgat
gtggtcggatatgcaatcaccatcctggatagacaaggtacgtctccagtgttgtacttg
gtggatgaaaagttagattttgtctcggtgaggatctgcagcagtctgactcatcttgct
ctcgaggatctggttaagccattagctctgctggctgtgagcaacctgcagatccgacag
ctgtctggctccatccccggtctttatgctggagaacaagcactgttttccacacaccct
aaagagacccacttacagcaagctgtggcacgtctgaagatctttgctgagggctacgag
catttcttaataatcgcagaggagaagctgtcgaacctgattcctacaggtgtcttgaac
tcttgtgaatcccccagaactccagctttgcccaaatcaaatgtcaaaatgaatgtaaca
ccccaacaagcaagagttttgtccccctttaccccagttgccaaaaaaacaccaacagcc
agtgccaactctgagtccaaagaccccaggagtgggaaaagaaagcgcggcttggactac
ctgtctcgtctcaactccccagcccccctcctttctctgggaatggtccactcccccaga
gtcagcaagactttcaaccccccgagaaggtgtgggacgacccactctccttctcaaact
gactcaaaccctccatcggtagataagcaatgggtgaatgatgaggaactggccatgata
aacactccaacactactggatgggtag
DBGET
integrated database retrieval system
