Trichomycterus rosablanca: 134334862
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Entry
134334862 CDS
T09921
Name
(RefSeq) F-box only protein 39-like
KO
K10314
F-box protein 39
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134334862
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
134334862
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
F-box_5
SAM_NCD1
Motif
Other DBs
NCBI-GeneID:
134334862
NCBI-ProteinID:
XP_062873399
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All DBs
Position
20:complement(5055275..5058564)
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AA seq
480 aa
AA seq
DB search
MEHTNQPEEHLQDKEKANEKIDGTKEDPQKKTLSHSEEEFKWSVLPDVCLRQVFWWLQDA
DRAQAALVCHHWHHVVRSPSLWRKRTFNFSGHLPWSHHSELENGIKYVQSYGSYLENLEV
HFIHPLNTYVTRRFQQIMRTFLAALRKSGACLRSLTIYSMHLNRPAYCNSVRNALVRSLA
FYLRRGGSQLNSLNLTGARFNLPHGIQILEAVAATQHYDRIGRLSGLATLNLKDFFTQSL
DVYSTQHFARVLQRFQGLSNLTLNYSCISNELLQALAFCCTGLNGVGGLCNLSVYCHANE
PHFQMIRGDAWALLAQKCPNLRVQITVEGILAIEQLCNILLKEIPLNDLTLSSLYLTQLN
WTIKPALSNLLPWYRTHLQKLTLDIQNNNESMEEELLELVTVCSKLTYLNVRAFLSISFL
ETLLQKRLERKCSLQTIKVRLYIRRHETHEANAMLQEVFSRYKQLIDSELTYYAIPYPIP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagcacactaatcaacctgaggagcatctccaggataaagaaaaggcaaatgagaag
atagatggcactaaagaggacccacaaaagaaaacactgagccactctgaagaagaattt
aagtggtcagtccttccagacgtttgtcttcgtcaggttttttggtggctgcaagatgca
gaccgagctcaggcagcacttgtttgccatcactggcatcatgtcgttcgatccccatct
ctgtggcgcaagagaacatttaatttttcaggccacctaccatggtcacaccactctgag
ctggaaaatggcattaaatatgtacaatcctatggcagctacctggaaaatctagaggta
catttcatccatcctctcaacacttatgtcactagacgtttccagcagatcatgaggact
ttcctggctgctctacgtaaatccggtgcttgtctgcgttcccttaccatctactccatg
cacctgaatcgaccagcttattgcaacagtgtccgtaatgccctcgtgcgtagcttggcc
ttctatctgcgacgtggaggttctcagctgaactctcttaacctcacaggagcacgtttt
aaccttcctcatggtatacagatcctggaggctgttgctgccactcagcactatgatcgc
attggacggctctcaggtttggccacccttaatctaaaagatttcttcacacagtccctg
gatgtctacagcacacaacactttgcaagagtccttcaaaggtttcaaggtctcagcaac
cttacacttaactacagctgcatttcaaatgaactgctgcaagccttggctttctgctgt
actgggctgaatggggttggtggactgtgcaaccttagtgtctactgccatgcaaatgag
ccacacttccagatgatcagaggagatgcctgggccctcctggcacagaaatgccccaat
ttaagagtgcagattactgtggaaggcatcttagccatcgagcagctctgtaacattctg
ctcaaggaaattcctctgaatgatctaacactcagcagcttgtatttgactcagttaaac
tggaccatcaaaccagcactttcaaacctgctgccctggtacaggacccatctgcagaaa
ctcactctggacatccagaacaacaatgagagcatggaagaagagttgctggaacttgtt
acagtttgtagcaagcttacctacctgaacgtcagggccttcctaagtatcagctttctg
gagacactcctgcagaaacgtctggagagaaaatgctctcttcagaccataaaagtgcga
ctctacatcagaagacatgagacacatgaggcgaatgcgatgctacaggaggtgttctct
cgctacaagcagctcattgactccgagctcacctactatgccataccttatcccatcccc
taa
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