Trichomycterus rosablanca: 134335090
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Entry
134335090 CDS
T09921
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134335090 (smn1)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
134335090 (smn1)
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Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
Motif
Other DBs
NCBI-GeneID:
134335090
NCBI-ProteinID:
XP_062873554
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Position
21:complement(13761052..13967197)
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AA seq
274 aa
AA seq
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MANGTSEVVFVRGTGQSDDSDIWDDTALIKAYDKAVASFKNALKGEDDTTQPKKEKPGNK
RKNNKKSKSRKKSNASPDREWKVGDTCYAFWSEDGNLYTATITSIDVQKGTCVVCYTDYG
NEEEQNLSDLLTDIPEVDIEAKQTVDGKESSTEESDRSSTPHQFNQQKHKAKGKTSAGRP
MWASGFPPPPGPHFRMSEGKRGDPGPAFPGWPPMIPPGPPMIPPPPPMSPDMLEDDEALG
SMLISWYMSGYHTGYYLGLKQGRKEAAAKKSHHK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggctaatggaactagtgaagttgtatttgttcgcggaaccggtcagagtgatgactca
gacatttgggatgacaccgctttgataaaagcctatgataaagcagtcgcatcatttaag
aatgcattgaaaggtgaagatgatacgactcaacctaaaaaagaaaaacctggcaacaag
cgaaagaataacaaaaagagcaaaagcagaaagaaatcgaatgcgtcacctgacagagag
tggaaggtcggagatacctgttacgcattttggtctgaggatgggaacttgtacactgcc
actattacctctatagatgtgcagaagggcacctgtgttgtgtgttacactgactatggg
aatgaagaggagcagaatctgagcgatctcctcacagatattcctgaggtggacatagaa
gctaaacagacagtagatggtaaagagtcgtcaacagaggagagcgatagatcttctact
ccacatcagtttaatcaacagaagcacaaagctaaaggcaaaacttcagcgggacgtcct
atgtgggcttctggttttcctccacctcctggcccacacttcagaatgtctgaaggtaaa
agaggagatcctggacctgctttccctggttggcccccaatgattccacctggtccaccg
atgatcccaccgccgccaccaatgagtccagacatgctggaggatgacgaggctttaggc
agcatgctgatctcatggtacatgagtggctaccacacaggatactacctaggcttgaaa
caaggtcgaaaagaagctgcagcaaagaagtctcatcacaaataa
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