Trichomycterus rosablanca: 134335094
Help
Entry
134335094 CDS
T09921
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134335094 (vps52)
Membrane trafficking [BR:
trn04131
]
Protein recycling
Others
EARP complex
134335094 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
134335094 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
COG6_N
DUF7716
DUF1664
CoV_NSP7
DUF5740
MscS_porin
Motif
Other DBs
NCBI-GeneID:
134335094
NCBI-ProteinID:
XP_062873600
LinkDB
All DBs
Position
1:complement(10897855..10920036)
Genome browser
AA seq
717 aa
AA seq
DB search
MADNVVTTENVGEINKAVDFLHDEKADADMVPPLNLGDLDLSSDEFILDEVDIHIQANLE
DELVQEALRTGVDLRQYSKQVEAELHRIEQASIKDYIKESQNIASLHNQITACDSILERM
EGMLSSFQGDLSSISSEIETLQQQSVSMSVRLKNRQAVRSHLSQLVDELLVPSTMISVIM
ESPVTEQDFLEQLHELNNKINFAKELSFRETLACADIQDIVDRLKLKAVSKIREFILQKI
YSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSYFKSYSSR
LLKVQYEDVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAVLSPAELEGPILIP
HAAQRGDVRYPYETLFRSQHYALLDNGCREFLFLSDFFMVTGNSSLDLFNSVMGKTLSMF
LKNISTYVSDCYDSIAVFLCIHIILRFKAITAKRTIPALDKYWEAVLEMLWPRFELILEM
NIQSIRDTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNALLGQLQIEVENF
VLKMAAEFPSRRDQLIFLINNYDMMLGVLMERAADDSKEVEGFQQLLLARTQEFIEEILA
PPFGGLITFVKESEALMEKGQLDKLKNEEARITQLVRGFSSTWKQSVEALSQDVMRSFTN
FKNGTSIIQGALTQLIQYYHGFHKILSQPTFRSLAVRSELINLHHLMVEVKKHKPNF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatgtagtcactacagagaatgttggagagataaacaaagctgtggatttt
ttacacgacgagaaagccgacgccgacatggtgcctcctctgaacctgggcgatttggac
ttgagctcggacgagttcatcctggacgaggtggacatccacattcaggctaacctggag
gacgagctggtgcaggaggccctgaggacgggtgtagacctgaggcagtactccaagcag
gtggaggccgagctgcatcgcatcgagcaggcttccatcaaagactacataaaggagagt
cagaacattgcgtcactccataaccagatcaccgcctgtgattccatactggagaggatg
gaggggatgctgagcagtttccagggcgatctttcctccatcagcagtgaaatcgagacg
ctgcagcagcagtcggtcagtatgagcgtgaggctgaagaacagacaggctgtacgcagt
cacctcagccagctggtggatgagctgctcgtacccagcaccatgatcagtgtgatcatg
gagagtccggtaacagagcaggactttctcgagcagcttcatgaactgaacaataagatc
aactttgctaaggagttgagtttcagagagacgctggcctgcgccgacatccaggacatc
gtcgatcgtctgaagctcaaggcggtcagtaagatccgtgagttcatcctgcagaagatc
tactcgttcaggaaacccatgaccaactaccagatcccacagaacacactcctcaagtac
aggttcttctaccagttcctgctggccaacgagaggacggtggccaaagaaatccgggac
gagtacgtggacaccatgagcaagatctactacagctacttcaagtcctacagcagcagg
ctgctcaaagtgcagtatgaagacgtggcggataaagacgatctgatgggggtggaagat
acagccaagaaaggtttcttctccaagccgtccctgaagagcaggaacaccattttcacg
ctgggtcagcggggggcggtgttgagcccagccgagctggagggacccatcctaattcct
cacgctgctcagcgtggagacgtcaggtacccgtacgagacgctgttccgcagtcagcac
tacgccctgctggataacggctgccgtgagttcctcttcctgtccgatttcttcatggtg
acgggaaactcctcgctggacctgttcaacagcgtcatgggcaaaacgctcagcatgttc
ctgaagaacatctccacctacgtgtcggactgctacgacagcatcgccgtgttcctctgt
atccacatcatcctgcgcttcaaagccatcaccgccaagaggaccatccccgccctcgac
aagtactgggaggccgtgttggagatgctgtggccgaggttcgagctcatactggagatg
aacatccaaagcatccgggatacagaccctcagaaactgggagtgctggataccagacca
cactatatcacgcggcgctatgctgagttctcctccgctatagtgagcattaaccagacc
ttccccaacgagaggaccaacgccctgctggggcagttacagatcgaggtggagaacttt
gtgctgaagatggccgctgagtttccctccagacgtgatcagctcatcttcctcatcaac
aactacgacatgatgctgggagttctcatggagagagcagctgacgacagtaaagaggtg
gagggattccagcagctcctactggccagaacacaggagtttattgaggagattctggct
cctccgtttggaggcctgatcacctttgtgaaggagagcgaggcgctgatggagaaaggg
cagctggacaaactgaaaaatgaggaggctcgtattacacagctggttcgaggtttctcc
agcacgtggaagcagtcagtagaagctctgagtcaggacgtcatgcgctccttcaccaac
tttaaaaacggtaccagcatcatacagggggcactgacccagttgatccagtactaccat
ggcttccataagatcctgtcccagcccaccttccgcagcctggccgttcgctccgagctc
atcaacctgcaccacctgatggtggaggtgaagaaacacaaacccaacttctga
DBGET
integrated database retrieval system
