Trichomycterus rosablanca: 134335104
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Entry
134335104 CDS
T09921
Symbol
pdzd2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134335104 (pdzd2)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
134335104 (pdzd2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
134335104
NCBI-ProteinID:
XP_062873575
LinkDB
All DBs
Position
21:complement(14840126..14952806)
Genome browser
AA seq
2308 aa
AA seq
DB search
MPITQENALSHLPLLESWLQVHARDQEQDQEDECRTNAGDNAPCLAAVRKLVEYIQLNFT
DCESRTCNGGIKEEADVELRAVWMSKAAEDEPEFGLSFGNIPIFGDPEGKKKVRRRRRKS
DKGPVLDVGCIWVTEVKKRSPAACCGDIKLRDELLSLNGQLMVGVDVTGASYLADQCWNG
GCIYLIMLRRIKRKAPVPPCNGSAGCAESPSHHCVSVKSESACNSPTRNGKRTRKFGVIS
RSSFSRDSKESNDSRNCGHENGYASEATASGDSTPTEDSPALGPGSTTTLPVRSNSCLAE
SFRTQDQRNEPSSQTRESSNIWKMHMLKGRDGLGIQITGGRGSKRSPHGIIVAHVEKGGA
AQRDGRLKTGDELLMINGHSLVGLSHQEAVAVLRSAAGLVELVVASRNESEVDFHKYPSS
SLPDLVSTCSAQSSPPSPGDEKDNMVPDAEDMRASSLSLPTHDSFTELDKLDEHSRTEGP
KGCCRSPTPMKFRSRSQGGSRLESVGEDDELIVENGEAGGAAADKPAHGGRKHSLPQQLD
TVGIRHEYQIVKKSTRSLSTVQVESPWRLAQPSIISNIVLMKGHGKGLGFSIVGGQDSAR
GRMGIFVKTIFPNGAAAADGRLKEGDELLEVNGESLQGLTHQQAIQTFKQLKKGVVTLTV
RTRLRSPSLTPCPTPTLLSRSSSPNSNVSSGTPLPSGFDEGDYRKGPGPKDRIVMEVTLN
KEPGVGLGIGACCLTLENSAPGIYIHSLAPGSVAKMDGRLSRGDQVLEVDSVSLRHAALS
EAYAILSECGPGPVSLIISRHPNPKVSEQEMDEAISRSTHRDHMSSHSCYTLGIPSKSPS
PTVKARQVEGNNHALSWTMKRFLEPASRQTSLSSEAELSQYFSHDVPSQSSLSESTAIGS
SDDDMLHNSRSCNTSLDEPTAPHLHAYKDCDPCVDGTPSSRESCENFSGPVCQTTERQAS
VGSSPSSVRSPLLRQRPVICYEDEPSDEDEDTGSFCQLKGGIANGTRQQEEDSGIAVVSS
SLEADDESQHSSLESVEGRANCAELTLIPACCQEQNTRKEAKRSPKLEHKAVTRVKSMMS
IECPNHVQKAKPEDSTAAPTGGPAHVSQRGRAQHHCRKGELSELAGMCTIETVVLKRTES
ESFGLDLEIKSNPLKVLITGLKPGGAAEREAKGRLSVGDEIVAIGDTPVCTSSYQEICDL
MHGLPITLTLEVKKPVSAVDRLCSLMTSSGCERSTRMESAAAPEQKTSMDQTGVAFVETE
NSCTEPNHKPEEEIPTNEVAVSNIDDVVTDILNNERSKSDSTDVAKTMTTTGSVETSNPG
PKEQPNPLDFSILDSENKGCLLPVGKTFLNSYSRNYSQLLNENADLSVKGCEEHPSMYNM
LDESDTETDSATDSSAKNKTAQNNCEELQDTDSDEEVELCYSTVSDPQSNQQTDCSVSLK
QDILRNQAGNKVGAAEVLQSIPSPLDDVDSKTEHLSSNLTESRSLIHHEPFNSEPSDETV
LCLQRTSSSEPSESKLENVEKVLVPATSPPFLSGSPRAIEIPVTSAEQDFASTEFSGKSS
STPTKDKEKIKTPSSPDYKFQSKSTTNRAVEDKPLNNTPVSPLLSSRFRQEEKSSKLKGL
SIKSKCNGQEQPVCRPASPLLKKSNCSPIHSPKLASKRITPAANQMASFLEKSSSIIKVG
DQNQQNGNQTIKGSDSVRSEHDDGTKPSISKSEASSKQRTFIEVRLSSSSSSSAPVLTCR
ESSGSNNLRDSPLHEESAPKLTSDTVISLKSSVSRPELNNCIESPTEPTELFQNDFKVNT
TTAESTSYKAGRSKLYHRALDRRSYSMGGRPQDPKPFSVRQRIKSFENLASFGPVMRCID
IHSYAVSSKTSFDRRRSANTTSVSAQSTDSCSLKRSLSSCVATSNSSSSLQPQNSFSSLV
LNSSEPAREKPPVEDAVSQPSPVLHTPPVLRSRNARASNGMSRSKLRELRALSMPELDKL
CIEDFSQDPGNIMFKTELEIHPTRQTTCTMVTRMRMVDPGMPETITNGDHGQEQTGGHSS
WSISMKDLLSSPLDQSKVQTALNSLPATTDVKNLMEEVNSVSEGKEDVYVVVLMKEVGSG
LGFSIAGGVDLEQKSVTVHRVFTQGVAGLEGTILRGDAVLCINGKSLHGTTHGEALSCLH
QTRLAGQAVVVIQRSKNSEPVSPRQELPLKYGSHVSPTHQQRNRENEAAVEVGPDGALSV
ELMKTSAGLGFSLEGGKASVHGDRPLYIKRIFRGGAAELSHVIDVGDELLAINGKSLQGL
MHYDAWNIIKTVSDGPIQLVIRKPRTSV
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atgcccattacccaagagaacgcactgagccaccttcctctacttgagagctggctgcag
gttcacgccagggaccaggagcaggaccaggaggatgagtgtcggacgaatgcgggcgac
aacgctccgtgcctcgccgcggtccgcaagctggtcgagtacatccagctgaacttcacg
gactgcgaaagccgcacctgcaatggcggaatcaaagaggaagcggacgtagagttgagg
gcggtgtggatgagcaaagccgccgaagacgagccggagttcggtctcagcttcggtaac
attcccatcttcggggatccagaggggaagaagaaggtaaggcgccggcgccggaagagc
gacaagggtcctgtgttggatgtagggtgcatatgggttaccgaggtgaaaaagaggagc
ccggcggcctgctgcggcgacattaagctgcgggatgagttgctgtcgctcaacggacag
ctgatggttggagtggacgtcactggagccagctacctggcggaccagtgctggaatggc
ggctgcatctacctgatcatgttgcggaggatcaagcgcaaggcccccgtccctccgtgc
aatggcagcgccggctgcgcagaatctcccagccatcattgcgtcagcgtcaagtcggag
tccgcatgcaacagccccacgcggaacggcaaacggactcgcaagttcggcgtcatctcc
cgctcctctttcagccgagacagcaaggagagcaacgacagtcgaaactgtgggcacgag
aacggctacgcttctgaggccacggcctcgggggacagcacaccgactgaggacagtcct
gccttaggccccggaagcaccaccactctgcctgttcgctcaaactcatgcctggcagag
agcttcaggactcaggatcaaaggaatgaaccatccagtcagaccagagagagcagtaat
atctggaagatgcacatgctgaagggccgagatggactgggcatccagatcacaggtggc
cgcggctcgaaacgttctccacacggcattattgtagcccacgtagagaagggcggagct
gcacaaagggatggacgattgaagacaggagatgagctgctgatgatcaacggtcactct
ttggttggcctctcgcatcaggaggcagttgctgtcctccgttctgctgcagggcttgtg
gagctggtggtggccagcaggaatgaatctgaagtggacttccacaagtacccatcgagc
agcctgcctgatctagtgagcacatgctcagctcagagctctccaccctccccgggggac
gagaaagataacatggtgccggacgcggaggacatgagggccagcagcctctcgttgccc
acacatgactcgttcacagagctggataagctggatgagcatagtcgaactgaaggaccc
aaaggctgctgccgcagtccgacgcctatgaaatttcgcagccgatctcaaggtggcagc
cgtctggagtctgttggagaagacgatgaattaatagttgaaaatggtgaagcaggaggt
gctgcagcagacaaaccggcacatggtggacggaaacattccctcccacagcagctggac
acagtaggaatccgacatgagtatcaaatcgtgaagaaatcaacacgttccctaagtact
gttcaagtggaatcaccatggcgactggcccagccgtctattatctccaacatcgtcctg
atgaaaggacatggaaagggtctgggctttagtattgtcggaggtcaagattctgcccga
ggcaggatgggaatattcgtcaagaccatttttcccaacggagctgcagcagcagatggt
agacttaaagagggagatgagctattagaggtaaatggagaatctcttcaaggcctcaca
catcagcaggccattcagaccttcaagcaactgaaaaaaggagtagttacactaacagtg
cgtacacggctgagaagtccaagcctgactccgtgcccgacaccaaccctgctcagccga
tccagttcacccaactctaacgtcagtagtggcacacccttaccttcaggctttgatgaa
ggagactaccgcaaaggacccggccctaaagatcgcatcgttatggaggtcacacttaat
aaagagcccggtgtggggttggggattggtgcctgctgtttaacgctagagaacagtgct
cctgggatctacattcacagtttggctccaggatccgtcgccaagatggatggcagactc
agtcgaggcgaccaagtcctggaagtagactccgtaagtctccgccacgctgcacttagt
gaggcctacgctattttgagcgagtgcggacctggcccagtgagcctcatcataagccga
catccaaaccccaaggtgtcagagcaggagatggatgaggcaatctcacgctctactcac
agggatcatatgagcagtcattcctgctacactctgggaataccatccaagagtccttca
cccacagtaaaggccaggcaggttgagggcaacaaccacgccctcagctggaccatgaaa
agattcttagagccagcaagccggcaaacctctctaagttctgaggctgaactctctcag
tacttctcacacgatgttcccagccagtcgtctctgtcagaatccacagcaataggctct
agtgatgatgacatgcttcacaacagcagaagctgcaatacatcactggatgagccaaca
gcgcctcatttgcatgcttataaagactgtgacccctgtgtggatggtactccttcatcc
agagaaagctgtgagaatttctccggtcccgtttgccaaaccacagagcgacaggccagc
gttggcagcagccccagctcagtccgtagcccactcctgcgtcagcgccctgtcatttgc
tatgaagacgagcccagtgatgaagacgaagataccggatccttttgccaattaaaaggt
ggcatcgccaatggtacacgtcagcaggaagaggactctggcatcgctgtggttagttct
tctctggaagcagatgacgagagtcagcacagttcgctggagtcggtggagggacgtgcc
aattgcgcagagctgacccttattcccgcttgttgccaggagcagaacacgagaaaagag
gccaagcgttcacccaagctagagcacaaagccgtgacgcgtgtgaagagcatgatgagc
atcgaatgtccaaaccatgtacagaaagccaaacctgaggattccactgcagctcctaca
ggtggcccggctcatgttagccaaagagggcgagcccaacaccactgcaggaaaggcgag
cttagtgagctggcaggcatgtgcactattgagactgtggttctgaagcgcactgagtcg
gagtcttttggactggatctagagatcaagtcaaatcctctaaaggtcctgataaccgga
ctgaagcccggaggagcagctgaaagggaagccaagggcagactgagtgtgggggatgaa
attgtagccattggcgacaccccggtgtgtacctcttcctatcaggagatctgtgacttg
atgcatggcttaccaatcacactgactttggaggttaagaagccagtctcagctgtagat
cgactgtgtagtttaatgacgtcttctggctgtgagcggtcaactagaatggaatctgca
gctgctccagagcagaaaacgagcatggaccaaactggggttgcatttgtagaaacagaa
aattcctgtacagaaccaaaccataaaccagaagaagaaatccccaccaacgaggttgct
gtcagtaatatcgatgacgttgtgactgatattttaaacaacgaaagatccaaatcagat
tccacagacgttgcaaaaacgatgacaactacaggttcagtagagaccagcaacccagga
ccaaaggagcaaccaaatcctctggatttctctattttagattcagagaacaaaggttgc
cttttaccagtgggaaagacatttctgaacagttactcccggaactatagtcagctccta
aatgaaaacgcagacctttctgtgaaaggatgtgaagagcacccgagcatgtataatatg
cttgatgaaagtgatactgagaccgactccgccactgatagttcagcaaagaataaaaca
gcacaaaacaactgtgaagaacttcaagatactgactctgatgaggaagttgagctgtgt
tacagcaccgtttctgaccctcaatccaatcaacaaactgactgttcggtctctctaaag
caggatatcttaagaaaccaagctgggaataaggtaggtgctgcggaggttcttcaaagc
ataccttctcccctagatgatgtggactcaaagacagaacatctgtcctctaacctcact
gagtcccggagtctgatccatcatgagccctttaattcagagccttcagatgagacagtg
ttgtgtttgcagagaacgtcaagctcagagccatctgaaagtaaattggagaatgtcgaa
aaggttttggtgcctgctacaagtccaccgttcctctcaggttcacccagagctattgaa
ataccagtcacgtcagccgagcaagattttgcaagtactgaattcagcggcaaatcatca
agtacaccgactaaggataaagagaaaataaaaacaccctccagccctgactacaaattc
cagtctaaatccactactaatagagctgtggaagacaagcctctgaacaacacccctgtc
tcacctcttttaagtagcaggttcaggcaagaggagaaatcaagcaaacttaaaggatta
agtattaaaagtaaatgcaacggacaggagcaaccagtgtgtaggcctgccagcccgttg
ttaaagaaatccaactgctcacccattcattcccctaaattagcatctaaaaggattacc
cctgcagctaatcaaatggccagcttcctagagaagagtagttcgatcattaaagtaggg
gatcaaaaccaacagaatgggaatcaaaccataaaaggaagtgactctgtgaggtctgaa
cacgatgatggaacaaagccgtcaatatcgaaaagtgaggcaagctcaaaacaaaggact
ttcattgaggtgcgactctcatcatcatcttcatcatcagcaccagtccttacatgccgg
gaatcttcaggtagcaataatttaagagacagcccattgcatgaagaatcagcaccaaaa
ctcacttcagatactgttatttccctaaagtcatctgtgtctagaccagagttgaataat
tgcattgaaagcccaactgagcctacagaattatttcaaaatgatttcaaggtaaataca
accactgcagaatcaacaagttataaagcaggcagatctaaactctaccacagagccctg
gatcgaaggagttactccatgggtggcagacctcaagaccccaaaccattttctgttaga
caaagaatcaagtcatttgaaaacctggccagttttggaccagttatgagatgtattgac
atccactcttacgctgtgagctccaagacctcttttgacaggaggcggtctgctaacacg
acctcagttagcgcccagtccacagatagttgctctctgaagaggagtcttagctcctgt
gtggctacttcgaactcctcttcttcactacagccacaaaattccttttccagtttggtt
ctaaacagctcagagccagcaagagaaaagccaccagttgaggacgctgtttctcaaccc
agtccagtattacacactccaccggtgctgcgctcccgcaatgcccgtgccagtaatggg
atgtcacgttcgaaactaagggaactaagggcacttagcatgcctgagcttgataagtta
tgcattgaagacttctcccaagacccaggcaatatcatgtttaagacagagctggaaatc
caccctacaagacaaacaacatgcactatggtgaccaggatgaggatggttgatcctggg
atgcctgaaacaattaccaatggggaccatggtcaggagcaaactggaggacattcaagt
tggtccattagtatgaaagacttattatcctctccactggaccagagcaaggtgcaaaca
gctctaaattccctcccggccactacggacgtgaagaatctgatggaggaagtgaacagt
gtttcagagggtaaagaggatgtttacgttgtggtcttgatgaaggaagtgggctctgga
cttggcttcagcatcgcaggaggggtggacctggagcagaaatcagtcactgtccatcgg
gtcttcactcaaggggtggcggggttggaaggtaccatcttacgaggggatgctgtgtta
tgcataaatggaaaaagtctgcatgggacaactcatggcgaggctctgtcctgtctccat
caaaccaggctcgccggtcaagcagtcgtggtcatccagagaagcaagaacagtgagcct
gtgtctcccagacaggaactccctttaaaatatggatcacatgtttctccaactcatcaa
cagagaaacagagaaaacgaagcagctgtggaagttgggccagatggagcattaagtgtt
gagctgatgaagacctcagcaggcctgggtttcagcttagaggggggcaaagcttcagtt
cacggtgaccgccccctttacatcaaacgtattttcagaggaggtgctgctgaactgtcc
catgttatcgacgttggagatgaacttctagccatcaatggcaagtccttgcagggcctg
atgcattacgatgcctggaacatcataaagacagtttcggacggccctatccagttagtc
attagaaaaccccgcacctcagtatga
DBGET
integrated database retrieval system
