Trichomycterus rosablanca: 134335200
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Entry
134335200 CDS
T09921
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134335200 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134335200 (sv2ca)
Transporters [BR:
trn02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
134335200 (sv2ca)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide_3
Milton
Motif
Other DBs
NCBI-GeneID:
134335200
NCBI-ProteinID:
XP_062873745
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All DBs
Position
21:complement(13302274..13334140)
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AA seq
728 aa
AA seq
DB search
MDFSDPQDTNLIRGARDMAKEAKKQASKKVNKVVDRASEEYSHSRAYQRFQDEDDDYYSQ
PAGNYTGNHTIEEEGSSDATEGHDDEDEIYEGEYQGIPGEFGLRDGQVALGRPVADVLKD
QKELESERQADEEELAQQYELIIQECGHGRFQWQLYFTLGLALMSDGVEVFVVGFVLPSA
ETNMCLPDSSSGWLGSIVYLGMMLGALFWGGMADKLGRRQCLLICMSINGFFAFLSSFVQ
GYGIFLFCRVIAGFGIGGTVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGEIYASAMAWA
IIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCSVVALTFMPESPRFYLEVGRHDEAWMI
LKQIHDTNMRARGQPEKVFTVNRIKIPKQIDEFVEMHPESGNFVSKNIFRMKTELNGIWV
TLMKCFNYPVKDSTVKLAIVWFTLSFGYYGLSVWFPDVIKHLQADEYASKVQRHSNEQTE
DFTFNFTLENQIHTNGVFNNDRFVHIKLKSVTFINTTFQNCYFEDVSSLNSLFKNCTILD
SFFYSTDIDETKLINTKVINSTFVHNKTGCQITFEEDYSAYWVYFVNFLGTLAVLPGNIV
SALLMDKTGRLSMLGFSMILSGISCFFLWFGTSEAMMIGMLCLYNGLSISAWNSLDVVTV
ELFPTDRRCTGFGFCNALCKLAAVLGNLIFGSLVSITKAIPILLASSVLVCGGLVGLRLP
DTRSIVLM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcagacccccaggacacaaacctcattaggggagccagagacatggcaaag
gaggccaaaaaacaagcctccaaaaaggtcaacaaggtcgtcgaccgagcgtcggaagag
tactcgcacagccgtgcctaccagcgcttccaagacgaagacgacgactactactcgcaa
cccgcgggcaactacacaggcaatcacaccatcgaagaggaaggttccagcgacgccacc
gaaggccacgatgacgaggacgagatttatgagggcgagtaccagggaatcccaggagag
ttcgggctcagggacgggcaggtggctctgggacggcctgtggcggatgtcctgaaggac
cagaaggagctggagagtgagaggcaggcggacgaggaagagctggcgcagcagtacgag
ctgatcatccaggagtgcggacacggcaggtttcagtggcagctgtacttcacgctgggg
ttggcgctcatgtccgacggtgtggaggtgtttgtggtgggatttgtgctgcccagtgct
gagacaaatatgtgcctgcctgattcgagttccggatggttaggtagcatcgtatacctg
ggaatgatgttgggtgctctcttctggggtggaatggcggacaagttgggccggcgtcag
tgtctgctgatctgcatgtccataaatggattctttgccttcctgtcctcttttgtccaa
ggctatgggatcttcttattctgtcgtgtaatagcaggctttgggattggcggcacggtg
cccatcgtgttctcctactttgcggaggtcttggcaagagagaagcgtggtgagcatctg
agctggctttgcatgttttggatgattggtgagatctacgcttcagccatggcctgggct
attatacctcattatggatggagcttcagcatgggttcggcatatcagttccacagctgg
agggtgtttgtggtggtctgtgccctgccatgtgtctgctctgtggtggccctcaccttc
atgcctgaaagtcccaggttctacctcgaggtggggaggcatgatgaagcgtggatgatc
cttaagcagattcacgacacaaacatgcgcgcacgcggccagcctgagaaagtcttcact
gtaaacagaatcaagatcccaaagcagattgatgagtttgtggagatgcacccagagagc
ggtaactttgtgtccaaaaatattttccgaatgaagacggagcttaatgggatctgggtg
accctgatgaagtgttttaattacccagtaaaggatagtactgtcaaactggctattgtg
tggtttacactgtcattcgggtactacggcttgtctgtttggtttcctgatgtgatcaag
catcttcaagctgatgagtacgcttctaaagttcagcggcactccaacgaacaaaccgag
gacttcacatttaacttcaccttagagaaccagatccacaccaacggtgtattcaacaac
gacagattcgtacatataaagttaaagtcagttactttcattaacaccacgtttcaaaac
tgctactttgaagatgtttcctctctaaactccttatttaaaaactgcaccattctggac
tctttcttctacagtacagatattgatgagaccaaactgataaacacaaaagtcataaac
agcacatttgttcacaacaaaactggttgtcagataacgtttgaagaagactacagtgct
tattgggtctactttgtaaacttcctggggacgctggctgtacttccgggaaatatagta
tctgccctgctaatggataaaaccgggcggttatcgatgctaggcttctctatgatcctt
tccggaatcagctgcttctttctctggtttggcactagcgaggccatgatgattgggatg
ctctgcctttacaacggtctcagtatttcagcctggaactcactggacgtcgtcacagta
gagctatttcctactgacagaaggtgtactggttttggcttttgtaatgccttatgtaag
ctggcagcagtacttgggaacctgattttcggctctttggtcagtattacaaaggccatt
cctatcctgttggcctcctctgtgctggtgtgtggaggtctggtgggacttcggctcccg
gacaccagatccatcgtcctgatgtag
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