Trichomycterus rosablanca: 134335259
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Entry
134335259 CDS
T09921
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03022
Basal transcription factors
trn03420
Nucleotide excision repair
trn04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134335259 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
134335259 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134335259 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
trn01001
]
134335259 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134335259 (cdk7)
03019 Messenger RNA biogenesis [BR:
trn03019
]
134335259 (cdk7)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134335259 (cdk7)
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
134335259 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
134335259 (cdk7)
Protein kinases [BR:
trn01001
]
Serine/threonine kinases: CMGC group
CDK family
134335259 (cdk7)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134335259 (cdk7)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
134335259 (cdk7)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134335259 (cdk7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Haspin_kinase
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
134335259
NCBI-ProteinID:
XP_062873837
LinkDB
All DBs
Position
21:complement(8822871..8828681)
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTNDAIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLIDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYLHHHWILHRDLKPNNLLLDENGVLKLADFGLAKTFGSPNRVYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPTEEIWPGM
SSLPDYVSFKLFPGTPLEDIFSAASDDLLELLRGLFTFNPCTRITATKALKMRYFSQKPV
PTPGPQLPRPNCSAEALKEQENLTIGIKRKRDGLEQGSLKKKLVF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctttggatgtgaagtccagggctaaacgatatgaaaaactggactttcttggagag
ggacagtttgctaccgtttacaaggcaagagacaaaacaaatgatgcaattgtggcaatc
aaaaagattaaagtcggacacagaacagaagcaaaagatggcatcaacagaacagctctt
cgagaaatcaaactgttgcaagagttaagtcatccaaacattattgggctgattgatgct
tttggacataaatccaacatcagccttgtgtttgacttcatggagacagatcttgaggtt
attataaaggacacaagtcttgtattgacaccagctaacattaaagcatacatactaatg
acactgcaaggcctggaatatcttcaccatcactggattcttcatagggatttaaagcca
aataacttgctgctagatgaaaatggggttctgaaacttgctgattttggtctggcaaaa
acatttggaagtccaaacagagtttatacacatcaagtagtgactaggtggtaccgtgct
ccagagctgcttttcggggctaggatgtatggggtaggtgtggacatgtgggcagtaggc
tgcattcttgcagaacttcttctacgagtacccttcctagctggagattctgacttggat
cagttgacaaaaatatttgaagcactggggaccccgacagaggaaatctggcctggaatg
agcagtcttccagactacgtgtcatttaaactgtttccgggaactccgttagaggacatc
tttagtgcagcaagtgacgaccttctggagctcctacgtggcctgtttacctttaacccc
tgcactcgtatcacagccacaaaggcactgaagatgcgatatttcagccagaaaccagta
cccaccccagggccacagcttccccgaccaaactgttcagcagaggcacttaaagaacaa
gaaaatctcactattggcataaagagaaagcgtgatggtctcgaacaaggttctttaaag
aaaaagttggtgttttag
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