Trichomycterus rosablanca: 134335381
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Entry
134335381 CDS
T09921
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134335381 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134335381 (usp39)
Spliceosome [BR:
trn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
134335381 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
134335381
NCBI-ProteinID:
XP_062873975
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All DBs
Position
21:20051546..20058624
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AA seq
497 aa
AA seq
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MANIKRERDVDDDEEEEDEGMPKKVARSQDTKDKRSRHCPYLDTINRSVLDFDFEKLCSV
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIANLDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALCNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKTFQITKQGDAVDFLSWFLNALHGALGGTKKKPSILTKVFQGSMRIFSKKLPHPDLPA
EEKEALLEKEEYQEEMLESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTE
KEYKTYKENFLKRFQLTKLPPYLIFYIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQATEKSTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEA
YIQIWKRQESEDSHTGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatataaaacgagagagggatgttgatgatgatgaagaagaggaagatgaagga
atgccgaagaaagtggcccgttctcaagacaccaaagacaaaagaagccgccactgtccc
taccttgacacaattaacaggagcgttttggattttgacttcgagaaactgtgctcagtc
tcgctctcgcacattaacgtctacgcctgtctcatctgtggaaagtactttcaaggcaga
ggtctgaagtcgcacgcgtacacccacagcgttcagttcacacatcacgtcttcctgaat
cttcacaccctcaagttctactgtttaccggacaactatgagatcatagattcgtcgcta
gaggacatcacgtatgtcctgaaaccgacgttcaccaaacagcacatcgccaatttggat
aaacacgggaagctgtaccgggcctacgatggcacgacatacctgcccggtattgtgggg
ctgaataacatcaaggccaacgattacgccaatgtagttctgcaggccctgtgtaacgtc
cctcctctgcgcaactacttcctagaggaggagaactaccgcgggatccggcgtccgccc
ggcgacatcatgttcctgctggtgcagcgcttcggcgagctcatgcgcaagctctggaac
ccgcgcaacttcaaggcccacgtctcgcctcacgaaatgctgcaggcggtcgtgctctgc
agcaagaagaccttccagattaccaagcaaggtgacgctgtggactttctctcttggttt
ttaaacgcgctgcatggagccctgggtggaaccaagaagaaaccatctattcttactaaa
gtgttccagggctccatgcgcatcttctcaaagaagcttcctcatccagatctgcccgca
gaagagaaagaggcccttctggagaaggaagagtaccaggaggagatgctggagtccact
tttctgtacctgacccttgacctgcctacagcgcctctttataaggatgagaaagagcag
ctgatcatcccccaggtccctctcttcaacatcttgggaaagttcaacggcaacaccgag
aaggagtacaaaacgtacaaagagaactttctcaaacgcttccagttaaccaaacttcct
ccgtacctgatcttctacatcaaacgatttaccaagaacaacttctttgttgaaaagaac
ccgacgatcgtcaactttcccatcacgaacgtggacctgcgcgagtacctcacagaagaa
gcccaggcgaccgagaagagcaccacctacgatctggtggccaatgtagtgcacgacgga
aaaccaacggagggatcgtacaggattcacgtcctacatcacggcaccgggaagtggtac
gaactccaggacctgcaggtgaccgatatcctgccacagatgatcacgctctcagaagcc
tacatacagatctggaagagacaggagagtgaagacagtcatacaggagcttaa
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