Trichomycterus rosablanca: 134335564
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Entry
134335564 CDS
T09921
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134335564 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134335564 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134335564 (usp30)
04121 Ubiquitin system [BR:
trn04121
]
134335564 (usp30)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134335564 (usp30)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134335564 (usp30)
Membrane trafficking [BR:
trn04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
134335564 (usp30)
Ubiquitin system [BR:
trn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134335564 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
134335564
NCBI-ProteinID:
XP_062874193
LinkDB
All DBs
Position
21:21860522..21866173
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AA seq
485 aa
AA seq
DB search
MPRCGQEASDQLLQQFIRSGSSTRCLRNKIMKNWGVIGGVVAALAAGVYVLWGPTSDRKK
RRTGMVPGLLNLGNTCFLNALLQGLASCPSFVSWLQQFSTQSSTRVMEKDTRISATLLQL
LQALSSTDPEEDDILDAGCLLEALRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQHKV
AHLFDMETLEKSAKTSETSISCRSRGPLHPIASQWRTQHPFHGRLTSYMACKRCERQSPV
RYDSFDSLSLSIPAVQWGRPVTLDQCLQHFISSETIKEVECENCTKKQAEDLDGSVLESQ
RTTFIKQLKLGKLPQCLCIHLQRLTWSPEGAPTKRHEHVQFSEYLSMDRYKHRGPAQRPC
RTQKPPAAAETHGPNLTNGVDPELHNNNKPLANGSLSSAFVHPPTLSPAFDLTYDYSSSE
YLFRLTAVLIHHGDTHSGHFVTYRRGSTPLSPQWLWVSDESVRQASLQEVLSSSAYLLFY
ERVRK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtgcggacaggaggcttcagaccagcttctccaacagtttatccgctcaggc
tcctccaccaggtgtttgaggaataagatcatgaagaattggggtgtgatcggaggtgtg
gtcgctgccctggcggccggtgtgtacgtgctatggggtcccacctcggacaggaagaag
agacggacagggatggtgccaggtctgctgaacctgggtaacacgtgcttcctgaacgcc
ctgctgcagggtctggcctcctgcccctcgttcgtcagctggcttcagcagttcagcacc
cagagtagcacccgcgtcatggagaaggacaccaggatatcagccactctactgcagcta
cttcaagctctgtccagtacagatcctgaagaggacgacattctggatgcagggtgtctg
ttagaagctctgcgtctctacaggtggcacatcagctcgttcgaggaacaggatgctcac
gagctttttcacgtcttgacgtcttctctggaggaggagcgcgaccgccaacacaaagtc
gctcacctgttcgatatggagacgctggagaagtcggcgaagacgagtgaaacgtccatc
agctgtcggagtcgagggccgttacatcctatagcgagccagtggaggacacagcacccg
ttccacggccgcctgaccagctacatggcctgcaaacgctgcgagcggcagagtccggtt
cgttatgattcgttcgacagtctctcgctctccattccagctgttcagtggggtcggcca
gttactctggatcagtgccttcagcatttcatctcttccgaaaccattaaggaggtggag
tgtgagaactgcaccaagaaacaggccgaggacttggacgggtcggttctggagagccag
aggaccacattcatcaagcagctcaaattgggcaagctcccccagtgcctgtgcatccac
ctgcagagactcacctggtcaccagagggcgctcccaccaagaggcacgagcacgttcag
ttctccgagtacctcagcatggaccgctataaacaccgcggccccgcccagagaccctgc
aggacccagaaaccccctgcagctgcggaaacacacggtccgaacctgaccaacggagtc
gatccagaacttcacaacaacaacaaaccacttgcaaatggaagcttgtcctccgccttc
gtccatcctccgacactcagtccagcgtttgacctcacgtacgactacagctcatctgag
tatctgttcaggttgacggcggtgctgatccaccacggcgacacgcactcgggccacttc
gtcacgtaccggcgcggctcaacgcccctcagcccccagtggctgtgggtttcggacgag
tcggtgcgccaggccagtctgcaggaggtgctctcgtccagcgcctacctgctcttctac
gagagggtgcgcaagtga
DBGET
integrated database retrieval system
