Trichomycterus rosablanca: 134335657
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Entry
134335657 CDS
T09921
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
trn
Trichomycterus rosablanca
Pathway
trn04137
Mitophagy - animal
trn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134335657 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134335657 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134335657 (vcp)
03009 Ribosome biogenesis [BR:
trn03009
]
134335657 (vcp)
04131 Membrane trafficking [BR:
trn04131
]
134335657 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134335657 (vcp)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
134335657 (vcp)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
134335657 (vcp)
Membrane trafficking [BR:
trn04131
]
SNARE
SNARE associated proteins
Others
134335657 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134335657 (vcp)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134335657 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
134335657
NCBI-ProteinID:
XP_062874310
LinkDB
All DBs
Position
21:15515720..15534379
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVATDPSPYCIVAPDT
VIHCEGDPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGSVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
GGPSQGSAGGSGGNVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggtggagaatccaaaaacgatgatctttctactgctattttgaagcaaaag
aacagacccaacaggttgattgttgatgaatccatcaatgaagataacagtgtggtctcc
ctctctcaggccaagatggacgagcttcagctgttcagaggagatactgttctgctcaaa
ggcaagaagaggagggaaactgtttgcattgtgctgtctgatgacacctgctctgatgag
aaggtccgcatgaacagggtggtacgcaacaacctcagagtgcgccttggagatgtcatc
agtattcagccttgccctgatgtaaagtatggaaaacgcattcatgttttacctattgat
gacacagttgaagggatcactggaaatttatttgaggtctacctcaagccatatttcctt
gaggcttataggccaatccgcaaaggtgacatcttcttggtgagaggaggaatgcgtgcc
gtcgagtttaaagtggtggcgactgatcccagcccttactgtatagtggctccagacaca
gtcattcactgtgagggagacccaatcaagcgtgaagatgaggaagaatctttgaatgaa
gtaggctatgatgacattggaggtgtcagaaagcagctggcccagatcaaagagatggta
gagctgccactccgacatccagcgcttttcaaggccatcggtgtgaaacctccacgtggc
attctgctgtacggaccccctggaactggaaaaactctcattgctcgtgctgtcgcaaat
gaaactggagcctttttcttcttaataaatggtcctgaaattatgagtaaactggctggt
gagtctgagagcaacctgcgtaaagcattcgaggaagccgagaaaaacgctcctgctatc
atcttcattgacgagttggatgccattgcacccaagagagagaagactcatggtgaggtg
gagagacgcattgtgtctcagctgctcaccctgatggacgggctgaagcaaagggctcac
gtcattgtcatggctgccaccaacagacccaacagcattgatccggcactcagaagattt
ggacgctttgacagagaggtggatattggtattcctgacgcaacagggagactggagatc
ctccagatccacaccaaaaacatgaagcttgctgatgatgttgacctagagcaggttgcc
aacgagacccatggccatgtgggagctgatttggctgccctgtgctcagaggctgcactg
caggccatccgtaagaagatggatctcatcgacctggaggatgagactattgatgcagag
gtcatgaactctctggctgtcaccatggatgatttcaggtgggccctgagccagagcaac
ccctcagctctgcgtgagaccgtggttgaggtgcctaacatcacctgggaagacattggt
ggactggacgatgtcaagcgagaactgcaggaacttgttcagtacccagttgaacatcct
gacaaattcctgaagtttggtatgaccccatctaagggtgtgctgttctatggaccgcca
ggttgtggtaaaaccctcctggctaaggccattgctaatgagtgccaggccaactttatc
tccatcaaaggtcctgagctgctcaccatgtggtttggagagtccgaggctaatgttcgg
gaaatctttgataaggcccgccaagctgccccatgtgtgcttttctttgatgagcttgac
tctattgctaaggcccgtggtggaagcgtgggtgatggtggcggagctgccgaccgtgtc
atcaatcagatcctaaccgaaatggatggcatgtccagcaagaaaaatgttttcatcatc
ggtgccaccaacagacccgatatcattgaccccgccattctcaggcctggtcgtctggac
cagcttatctacatccccctgcctgatgagaaatctcgtatggccatcctgaaggctaat
ctgaggaagtctcccatttccaaggatgtagacctggatttccttgccaagatgaccaat
ggcttctctggcgctgacttgaccgagatttgccagagagcctgcaagctggctattcgc
gagtctatcgagaatgagatcagaagggaacgcgagaggcagacaaacccctcagccatg
gaagtggaggaggacgacccagtgccggaaatcaggaaggaccactttgaagaggccatg
cgttttgctcgacgctctgtcagtgataacgacatccgcaaatatgagatgtttgcacag
acccttcagcagagcagaggctttggtagtttcagattcccctccagtaaccagggcgga
ggtggaccgagccaaggctctgcaggtggcagtggaggcaacgtgtttaacgaggacaac
gatgatgacctctatggataa
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