Trichomycterus rosablanca: 134335666
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Entry
134335666 CDS
T09921
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
134335666 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134335666 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134335666 (clip1a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
134335666 (clip1a)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
134335666 (clip1a)
BRITE hierarchy
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
UPF0242
DUF4200
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
134335666
NCBI-ProteinID:
XP_062874319
LinkDB
All DBs
Position
21:20316414..20343232
Genome browser
AA seq
2257 aa
AA seq
DB search
MSTAKPSGLKAPSKISRPAGPGAGATKTSPSAASKAAPGDKADDQDAGEDFKVGDRVWVN
GNKPGHIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQSDPLRGIFTRPSKLSRS
EGEANGTTTAPPSPTPSAAAPPTTPAPASAPPAGAATATKKVAPSTKPASNLTRDNSESV
SNLSEAGSLKKGERELKMGDRVLVGGTKAGVVRFIGETDFAKGEWCGVELDEPLGKNDGA
VAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTAARKVTTTPGLNRSPSSSSVSSM
SSVASSVSGKPSRTGLLTETSSRYSRKISGTTALQEALKEKQQHIEQLLAERDLERAEVA
KATSQVGEVEQELTVLREGQEQYVSEMESKMDQLRGLVEAADKDKVELLNQLEEERRRVE
DLQFRVEEACITKGDLETQTRLEHALLKELEQSLLFEKTKADKLQRELEDSRVATVSEKS
RILELQRDLTLRDKEVTALRQHLEAAPGQEASGDPTAPVLQAELILLRTQLSAQASSHGR
ELAALRAKLEEEGKATRENLAKLEASSALLAKDNEQLRAQLTEAEKEKVDAIELWRSKLE
SAVTSHQQAMEELKASSGAPKGAGESQPPELYEMRENLERLKMQHKLQLDESQVKHSADI
TRLTKEAEGLRKQLLALTEEKERLVESLRSNLESTETQHLVELEEALGKLHTAELRVKEL
EEENAKLGEQVEGKAQEIQDQNEALQSLHSQQSQGNQEVQSLVARVEEAEGKARSQEGKV
KELTTALEGKQKDLEGLQENLTSLKQTNSSLEKELSDLKQTVKASSDAQTETSQAVQKLQ
ETLNKKEEQCSTLSSESEKLKIQLSGMEAKLKAGDEKLEQLTKDKAKLEGDISELITTSG
DSSAQLGKMNDDLNQKERRIEELQKQLSEQKEVVARSEETRSQEQTRAKQELKDVSEKHQ
QEVSNLQEKIKLLEKNIEEAQTKVSEAQTSGEKALTGAVQKHTEELQELRGQVETAQKQL
TASEEKCQKLQQEVEQLLTFKEKAQSLTAELACSVQGSEKLASELGDLRSLSERLSKERD
ALHTEKETLDQQVSESQRKLSSLEDVQKELVSKNYEVNAANEQMSKEIQELRSASQELRT
EKASLTQDREQLSKEVEKITQVMEEIKAENVILKENQVEHLGQIETLEQGKAEQQDDVLK
HQEQVQKLETRSAELTQQHLKACEDRDKLHEELRSCQEDLQSSKSQCAKNEELQSKLQSE
KDVLSVENAKLQAETEQLRSENEKAWSDLKAAISDKESLGAEKAELQKQLHATKAALEQA
GKDNAELQASKDSFARMLEEIKTSREVTDSERVLLMEEKEGLLETQRKMCSEKQELSKQI
EELVEKLRLGADEVKATKEKLQLDSAEFAREKQTINDKVSETEKILQTLQDENTSLKAAI
EEQNNQRNDLEHQMSCLKENNEKEISQNASVLEEQKRLADDLLQKRTDLESEVEKMKQKL
EQIDSERKNFMQESVDLKELLQQKSSDAESLEKAKVSLVEENQKLQLSLDQMKQEHVQHS
ETFTKDKTSLKSTVDELKKTNDELLQQVKHLTDQSRSLAEAKATLEANQQALESDRNDLS
GVKETLSNKVEDLMKRVTDSESESARLLEVQSKLDAEIVSVRNEKEKAQTDQQSLVTKVE
QLWISVNELSSEGTDISDEPGLDLSQRSASSCRKVEELTKVLGKIADERTFLSKEVELLK
TQQKQSDGDRSDLDAAKALLASKIEDLERNSTQLLKEKTDLIASRASLDQEVLSLRSNLE
NSDKKCSDYLCKVEELTKSQAELGTRLQNLQDDKTTLEERQRDVEAQVNVLTKAKDETVS
SLASVQAERDALRAEKEKAGLMVTQLEAQNESALAKQLEAAESAGHTAQALEKLTQEKLV
LHKEKSEAGTLIQELKNAKEQMQTQMDKLSEQNSQYQQELKKSKEQLTSETDTIHGLQKE
IEELKRAASENILSTEAVKKENVKLVKNLTSSQKQSDGQQKLKEQLAKLSSQLKDVEKSK
HALKNELDKEKSALQQSVQKSSALISEKNTELETLRKEVTALRGESATLKKLQNDKAQLQ
ERVSTLEKSLSGGTKSGPADAPSGALEQMREAKETAKCQVEFLNSVIVDLQRKIEELKSK
LEKMAEAALNGNTASEMDNHESLSESKAKKKAPPRLFCDICDCFDLHDTEDCPTQEQLPD
SPPHTTYHGSSADERPYCDTCEVFGHWTESCNDDQTF
NT seq
6774 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccaaacccagcggccttaaagcgcccagcaagatcagcaggccggccggg
cccggggccggggccaccaagacgtcgccctcggctgcctctaaagcagctccaggcgac
aaggccgacgaccaggacgcgggcgaggacttcaaagtcggggaccgagtgtgggtgaac
ggcaacaagcccggccacatccagttcctcggagagacccagttcgcccccggccagtgg
gcgggcatcgtgttggacgagcccatcgggaagaacgacggctcggtcgcgggcgtgcgc
tacttccaatccgatccgctgagggggattttcacgcggccttccaagctttcacgtagc
gaaggcgaagccaatggaacgacgacggcgcctccgtcgcccacgccgtccgccgcggca
ccgccgaccacgccagccccggcgtccgccccgccagccggcgccgccaccgccaccaag
aaggtcgctccaagcaccaaacccgcctccaacctgactcgcgacaattccgagtcggtg
tccaacctgtcggaggcgggttcgctgaagaaaggggagcgggagctgaagatgggcgac
cgcgtcctggtgggcggcaccaaagctggcgtggtgcgcttcatcggggagacggatttc
gccaagggcgagtggtgcggagtcgagctggacgaaccgttgggcaagaacgacggcgcg
gtcgctgggaccaggtacttccagtgtcagcccaagtacggcctcttcgccccggtgcac
aaggtgacgcggatcggcttcccctccaccaccccagccaaggccaagaccgcagcgcgg
aaggtgaccacgaccccgggactgaaccgcagcccgagctcctcgtccgtcagctccatg
agttctgtggcctcgtcggtgagcgggaagcccagccgaaccggcctgctgacggagacg
tcgtcccgctactcgcgtaagatctccgggacgacggcgctgcaggaggccctgaaggag
aagcagcagcacatcgagcagctcctggccgagcgcgacctcgagcgggccgaagtcgcc
aaggccaccagccaggtgggagaggtggagcaggagctcacggttcttcgagaaggtcaa
gagcagtacgtgtctgagatggagtccaaaatggatcagctgcgtggcctggtggaggct
gcagacaaggacaaggtggagcttctgaatcagctggaggaagaaaggagaagggtggag
gaccttcagtttcgagtggaggaagcttgcataaccaaaggtgacctggagacgcagacc
agactggagcatgccctccttaaggagctcgagcaaagtctgctctttgaaaagaccaaa
gctgacaaactccagcgggagttagaagactctagggttgctaccgtttctgagaagtct
cgcatccttgaactacagagagacctcactctgagggacaaagaagtcacagcccttcgg
caacacctggaggctgctcccggacaggaggcctctggagaccccacagctccggtcctt
caagcggagctcattttactaagaacccagctctctgctcaagcttcaagccacggaagg
gagctggcggccttgcgcgctaagctcgaggaggaaggaaaggcaacccgtgaaaacctg
gccaaactcgaggcctcgtctgcacttctagccaaagacaacgagcagcttcgcgcccag
ctgaccgaggctgagaaggagaaggtggatgccattgagctgtggcgctccaagctcgag
tcggcggtcacttctcatcagcaagccatggaagagctcaaggcctcctcgggggctcct
aagggggccggcgagtcgcagccacctgagctttacgagatgcgggaaaatttggaaagg
ctcaagatgcagcacaagctacagctggacgagagccaggttaagcacagcgccgacatc
acgaggttgaccaaagaagccgaggggctccggaaacagttgctcgccctgaccgaggag
aaggagcgcctggtggagtctctgcgcagtaacctggagagtacggagacgcagcacctg
gtggagttggaggaagccttgggcaagctgcacacagctgaactgagggtgaaagagctc
gaggaggagaacgctaagctaggagaacaagtggagggcaaagctcaagagatccaggac
caaaatgaagctcttcagagccttcattctcagcagagccagggtaaccaggaggtccaa
agtctggtcgcccgggttgaggaagcggagggcaaggcacggtcgcaggaaggaaaggtc
aaggaattgaccacagctttggagggtaagcagaaggacctggaggggctgcaggagaac
ctgacctcactgaagcaaaccaacagctctttggagaaagagctttctgacttgaaacaa
acggtcaaagcatcttccgatgctcagacagagacctcacaagccgtgcagaaattacag
gagacgctgaataagaaagaggaacagtgctcgactctctccagtgaatcagagaagctg
aagatccagctgtccggcatggaggccaagttgaaagcaggcgatgagaagctggagcag
ttaaccaaagataaagccaagctggaaggagacatcagcgagctcataaccacctctgga
gacagttcggctcagctcggcaagatgaacgacgatctcaatcaaaaagaaaggagaatc
gaggagcttcagaagcagctctcggagcaaaaggaggtggttgctcgatctgaggagacc
aggagccaagagcagactcgagccaagcaggagctgaaagacgtcagtgagaaacaccag
caagaggtttccaacctgcaggagaagatcaagctgctggagaagaacatagaagaggct
caaacgaaggtcagtgaagctcagacctcgggagagaaagcgctcaccggtgccgtacag
aagcacacagaggagctacaggagctccgcggtcaggtagaaacggcacaaaagcagctc
accgcctctgaggaaaagtgccaaaaacttcaacaagaggtggagcagttgctgaccttc
aaggaaaaggctcagtcacttaccgctgaattggcttgctccgtgcaagggtctgagaag
cttgcttctgagcttggggatctaaggtcgttgtctgaacgtctgtctaaggaacgggac
gctcttcacaccgagaaggaaactctggaccagcaagtttcagagtctcaaaggaaactc
tcgagcttggaagacgttcagaaagaactcgtatctaaaaactacgaagtgaacgcagcc
aacgaacaaatgagcaaggaaattcaggaactacgttccgccagccaggaactgcggacg
gaaaaggcgtcgctcacgcaggacagagaacagctttccaaagaggtggagaagataacc
caagtcatggaagaaatcaaagctgagaatgttatcctaaaagaaaatcaagtcgagcac
ctcgggcagatagagactcttgaacagggtaaagccgagcaacaggacgacgtcctgaaa
catcaggagcaggttcagaagctggagactcggagtgcagagcttacccagcagcacctc
aaggcctgtgaggacagggataagcttcacgaggagctcagaagctgccaggaggatctg
cagtccagtaaatcgcagtgcgccaagaacgaagagcttcaatcgaagcttcagtccgag
aaagatgttctctcggtcgagaacgccaagttgcaagctgaaaccgagcagctccgcagt
gagaacgaaaaggcgtggtcagaccttaaagctgccatttcagataaagagtcccttggt
gcagaaaaggcagaacttcagaagcagcttcacgccacgaaggcggcattggaacaagcc
ggcaaagataacgctgaactccaggcctccaaggacagctttgccaggatgcttgaggag
ataaagacgagcagggaggtcacagattccgagagggttttactcatggaagagaaggaa
ggcttgctcgaaacccagaggaaaatgtgctccgaaaagcaggagctctctaaacagatt
gaagagctcgtcgagaagctgcgtctcggcgccgacgaggtcaaggccaccaaggagaag
ctccagcttgattcggccgagtttgctcgggagaagcaaacgattaatgacaaggtctca
gagactgagaagatccttcagacccttcaagacgaaaacacaagcttgaaggctgccatc
gaggagcagaataatcaacgaaacgatttggaacatcagatgagttgcttgaaggaaaat
aatgagaaggaaatttcccaaaatgcttctgttttagaagagcaaaagcgcctggcagat
gacttactacagaaaaggaccgacctggaatcagaggtggagaaaatgaaacagaaactt
gagcagatagattcagagaggaagaacttcatgcaagaaagtgtcgacctgaaggagctt
ctgcagcagaagagctcggacgcagagtctctcgagaaggcgaaggtcagcctcgtggaa
gaaaaccagaagttgcagctcagtctggatcaaatgaagcaagagcatgtgcaacatagt
gaaaccttcacaaaggataaaacctctctgaagagcactgtagacgagctcaagaagacg
aacgatgagctgcttcagcaagtcaaacatctgacagatcagagcagatctctggctgaa
gccaaggccactttggaagctaatcaacaagcactagaatcagacaggaatgatttatct
ggtgttaaggaaaccctctctaataaggttgaagaccttatgaaaagggttacggattcc
gaatccgagagcgctcgtcttttagaggtgcagtccaagctcgatgctgaaatcgtgtcc
gtcaggaatgaaaaagagaaggcacaaacagatcagcaatcactagtcaccaaagttgag
caattatggatttccgtgaatgagttgtcctcagagggaaccgatatttctgatgagccg
ggtctggacctctcccaaagatcggcttccagttgtcggaaagttgaagagcttaccaaa
gtactcggaaagattgctgacgagagaacctttttgtcaaaagaagtcgagctcttaaag
acccagcagaagcaaagcgacggcgaccggtcagatctggatgctgcgaaggcgcttctc
gcttctaaaatcgaagaccttgagaggaactccacacagcttcttaaagaaaagacggac
ctcatagcctctcgcgcctctctggatcaagaggtcctttcactccgtagtaacctggaa
aacagcgacaagaaatgctcagactatctgtgcaaggtagaagagctgactaagtcgcag
gccgagttaggaacgaggttacaaaaccttcaagacgacaagacgacgctggaagagcga
cagcgagacgtggaagcgcaggttaacgttttaaccaaggcaaaggacgagacggtctcc
agtctggcttcggtgcaagctgagagggatgctttacgagcggaaaaggaaaaagccggc
ttaatggtgacgcagctcgaggcacaaaacgagagcgctctagcaaagcagcttgaggcc
gcagagagtgctggacacacggcacaggctctggagaaactgactcaggagaagctggtg
ttgcacaaagaaaaatcggaggctgggactctcatccaggagctgaagaacgccaaagaa
caaatgcagacccagatggacaagctgtcggagcagaactcccagtatcagcaggagctg
aagaaatccaaagaacagctgacctctgagacggataccatccacggtcttcagaaagag
attgaggagctgaaacgagcggcgtctgaaaacatcctgagcacagaagctgtgaagaag
gagaacgtcaagctggtcaaaaatctcaccagcagccagaagcagagcgacggccaacaa
aaactcaaggagcagttggcgaaacttagcagtcagttgaaggacgtggagaagagtaaa
cacgctttgaagaacgaactggacaaggagaaatctgctctccagcagtctgtccagaaa
tccagtgccttgatctcagaaaaaaatactgaattggagacgctgaggaaggaggtgacg
gcgcttcgaggcgagagcgcgacactaaagaagctgcagaacgataaagcacaactacag
gagcgcgtgagcaccctggagaagagcttatccggagggacgaagtccggccccgcagac
gccccctcaggagctctggaacagatgagggaggcgaaggaaacggccaagtgtcaggtg
gaattcctgaactcggtcatcgtggatcttcagcgcaaaatcgaggagctgaaatccaag
ctggagaaaatggccgaggcggcacttaacggaaacacggccagcgagatggacaatcac
gaaagcctgagcgaatctaaagccaaaaagaaagcgccgccgcgcctcttctgcgacatc
tgcgactgtttcgacctgcacgacacggaggactgtcccacgcaggagcagctgcccgac
tctcctcctcacaccacctaccacggcagctccgccgacgagaggccttactgcgacacc
tgcgaggtgttcggccactggaccgagtcctgcaacgacgaccagaccttctaa
DBGET
integrated database retrieval system
