Trichomycterus rosablanca: 134335676
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Entry
134335676 CDS
T09921
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134335676 (hip1rb)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
134335676 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
134335676
NCBI-ProteinID:
XP_062874330
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All DBs
Position
21:19833599..19860381
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AA seq
1108 aa
AA seq
DB search
MCCFAVGFVLLGGRRKSPARCGLGCQVSPALVFGICGRKLREKIGMNSIRQVPSRVKSKM
NETSLGDERDRFDKQQLSSISKAINSSETPLKEKHARRIILGTHREKGAYTFWSYALGLP
LSSSPILSWKFCHVVHKILRDGHPNTLHDCMRHSSTISETGILWANLRDRQGYAQLVALY
TKLLHTKMAFHTAHSDIRPNLEVTDEVLEATAGTDINNVFQLTVEVFDYMDVELRLAESV
LRQLNTSIAISTLTAGQCKLAPLIQVIQDASQLYHYTVKLLFKLHACLPADTLQGHRDRF
HDQFHSLKTFFNKARDMMYFKRLIQIPRLPDSPPNFLRASALAEHVKPMVVIPDSDEPEE
DDEPETLIDVSDASSTMSFQSQVDIFDQAFGPPNNGLDDRDLQIDSLKQEIELLRAELEK
IKAEAQRYITQLKSQINSLETELEEQRVQKQRALVENEQLRMELEATRWRNAEHESMQVT
FVEADKKAQATELRYSKLKDKHAELVANHAELLRKSADTVKMLSTTQQTQEEVARTKQQL
AFEMERVKQESDMKLEEQKFEMDKLRWELEEKRGEMQKIKGTLQSCEVASLGLNNSVSSL
QTEKERLMRCVSEKEAELSSLRQTAQLKESSLQDERERSSRELGQLQGKLKEKLSREQHL
QQKLLDEQFALLQGTVAEAEVIIQDAVAKVDDPLHIRCTSSPDYLVSRTEATLGSISKVN
SGHSHYLKTMEDARPLLRALTQFSHLTADTIMNGSATAHMAPPDHADRLTENCRACATQS
LNFFQDLKSRVSIKGANTSSVRAAVQNILKIAQDLRPKGMDVGKDELGDMVDKEMAATSA
AIEEAVRRIDDMMYQARRDTQGVKLEVNERILNSCTDLMKAIRLLILASTDLQKEIVESG
RGAATVKEFYARNSRWTEGLISAAKAVGWGATQMVDSADKVVLHTGKYEELIVCSHEIAA
STAQLVAASKVKADRGSRKLTSLQQASRQVNEMAANVVASTKTGQDQIEEKDTMDFSGMS
LIKLRKEEMESQVKVLELESLLENERLRLGELRKKHYEIAGVPLQELSQDNGATYSAGSS
SPKPYKPSLMKKPTLSQKPNVPPKSLFR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgttttgcggtcggatttgtattactgggaggcagaaggaaatcacctgcacgt
tgtggtttgggttgccaggtttctcctgcacttgtttttgggatctgtggtcggaagctc
agggagaagatcgggatgaattccatacggcaggtgccatcgcgggtgaagagtaaaatg
aacgagactagtctgggagacgaacgggatcggttcgataaacagcagctcagcagcatc
agtaaggctataaactcttctgagacaccgctgaaggagaaacatgcccgcagaattatc
ctggggacgcatcgggagaagggggcgtacactttctggtcctatgctttgggtttgccg
ctgtccagcagcccgatactcagctggaagttctgccacgtcgtgcataaaatcctccgg
gacggccaccccaacactttacacgactgcatgaggcacagcagtacgatcagtgagacg
gggatactctgggcgaatctccgagacagacaaggatacgcacagctcgtcgcgttatat
accaagcttctgcatacaaaaatggcctttcatacggcgcattctgacatccgacccaac
ctggaggtcacagacgaggtcctggaggccacagccggaacagacatcaataacgttttt
cagctcacagtggaggtgttcgattacatggacgtggaacttcggcttgccgagtcagtg
ctgaggcagctgaacacctccatcgccatctcgaccttgacagcaggccagtgtaaactg
gcacccctgatccaggtcatccaggacgccagtcagttatatcactacacggtcaaactg
ctcttcaagctacacgcctgtttaccagctgatacactccagggtcatcgggatcgcttc
cacgatcagttccacagcctcaagacgtttttcaacaaagcacgagatatgatgtatttt
aaaaggctaattcagatcccaagacttcctgattcaccaccgaacttcctccgggcctct
gccctagcggagcacgtgaagcccatggtcgtcatcccggactcggacgagcctgaggag
gacgacgagcctgagacgttaatagatgtcagcgacgcttccagcaccatgtcctttcag
tcacaggttgacatattcgatcaggcattcgggccacctaacaacggcctagacgacagg
gacctgcagatcgacagtctgaagcaagaaatcgagctgctgcgagcagaactggaaaaa
attaaagccgaggctcagcgctacatcactcagctgaagtctcagattaacagtctggag
acggagctggaggagcagagggtgcagaagcagcgcgccctggtggaaaacgaacagctg
cggatggagctggaggccacgcggtggcgcaacgccgaacacgagagcatgcaggtcacc
ttcgtggaagcagacaagaaagctcaagctacagagctgcgctacagcaagctaaaggat
aaacacgccgagctggtagcaaaccacgcagaacttcttaggaagagcgccgacacggta
aagatgctgtcgaccactcagcagactcaggaggaggtggccagaaccaagcagcagtta
gccttcgagatggagagagtcaagcaggagtctgacatgaagctggaggagcaaaaattc
gaaatggacaaactgagatgggagctggaagagaagaggggcgagatgcaaaaaatcaag
ggcacgctgcagagctgtgaagtggccagcttgggtctgaacaactcggtgagctcgcta
cagacagaaaaggagcgtctgatgcgctgcgtgagcgagaaggaggcggagttatcctct
ctgaggcagacggcgcagttgaaggagtccagtctccaggacgagagggagcggagcagc
agggagctcggacagcttcagggcaaactaaaagagaagctgagccgtgagcagcatttg
cagcagaagttactggacgagcagttcgccctgttgcagggtacagtagccgaggcggaa
gtcatcattcaggatgccgtggccaaggtggacgatcctctgcacatccgctgcaccagc
tccccagattacctggttagccgtacagaagccacgctgggctccatctctaaagtgaat
tctggacattcgcactacctgaagactatggaagacgccagacctctgttaagggcgctg
actcagttttctcacctgaccgctgacaccatcatgaacgggagcgcgactgcacacatg
gcacctccggatcacgccgaccgactgacggagaactgcagggcgtgtgccactcagagt
ctgaacttcttccaggacctgaagtctagagtgtccattaagggggccaatacctcgtct
gtccgcgcggcggtccagaacatcctaaagattgcacaagatctgaggcctaaaggaatg
gacgtaggaaaggacgagctgggcgacatggtggacaaagagatggcggccacgtctgct
gctatagaggaagctgtgaggagaatcgatgacatgatgtatcaggccagacgagacacc
caaggagtgaagctggaagtgaacgagaggatcctgaacagctgcacagacctcatgaag
gctattcgcctcctgatcctggcgtccacagacctacagaaggagatcgtggagagcgga
cggggtgcagcgacagtgaaggagttttacgcccggaactcgcgctggaccgaaggtctg
atatctgctgccaaggcggtgggttggggagcgacacagatggtggattcggctgataaa
gtggtcctgcacacgggcaagtacgaggagcttatcgtctgttcacatgagattgctgcc
agcaccgcccaactcgtcgcagcctccaaggtaaaggccgaccgcggaagcaggaagctg
acaagtctccagcaagcttcccgtcaagtcaacgaaatggctgcgaacgtggtggcctcc
accaagacgggccaggaccagatcgaggagaaggatacgatggacttctctggcatgtct
ttaatcaagctaagaaaagaagagatggagtctcaggtgaaggtcttggagttggagagc
ctgcttgaaaacgagcggctgcgactcggcgagctgcgcaaaaagcactacgagatagcg
ggcgtcccgctgcaagaactgagccaagacaacggcgccacctacagcgcaggatcttcc
tcccctaaaccttataaaccctcactgatgaagaaaccgaccctctctcagaaacccaac
gtcccacccaaaagcctgttcaggtga
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