Trichomycterus rosablanca: 134335702
Help
Entry
134335702 CDS
T09921
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134335702 (si:ch211-225b11.1)
Transporters [BR:
trn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134335702 (si:ch211-225b11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134335702
NCBI-ProteinID:
XP_062874365
LinkDB
All DBs
Position
21:complement(5156081..5179089)
Genome browser
AA seq
595 aa
AA seq
DB search
METKANYKAPNSCSESPRDFTEKTMEAFYQYPNENTVEPRETWSRRLEFLLASIGYAVGL
GNVWRFPHLCYRSGGGAFLIPYVIMLFLCGIPLLFMEYAIGQYTRLGPIQALHKICPLLK
GVGLATVVISFVLATYYNVLMAWALYYLFNSFTSPFPWQSCNNTWNTPNCSTGFAGNATN
MKSSSQQFFDHRLLEITEGIEKAGGIRWELFGLLTLAWIIVFFCIFKGVKSTGKVVYFTA
TFPYIILFALLINNVQLPGAKDGILYFLMPNWNKLLEVQVWVNAAAQIFNSIGIAFGSMI
SMASYNKYNNNILKDTFVVSLANSATSILAGFVIFSGIGYMAHIHNLPVDDIATDGPGLV
FVVYPEAFSTMPVSQLWAPVFFFMLLCLGLDSEFAMVEVAVTCIMDGFGPKVLRWFKRKE
LVVLAVCSVGFLFGIPHITRGGIYVFQLMDHYTAVVSLMFLAFFEVLAVTLIFGVKKICL
MVESMTGKRPNLYFRVCWQFISPMLVLGILISSIIQYTPARYGKSYSYPLWAEVLGWFIS
LISIIWIPLGAIHEIWRNKGSFLQRLKVALTPTLQLEPEYTTKNQQSLTLFNTSL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaggccaactacaaagcgcccaactcatgttctgagtctcccagggacttt
acagagaagacaatggaagctttttatcaataccctaatgagaacactgtggagcccagg
gagacctggagtcgtcggcttgagttcttgctggcatccattggctacgctgtgggactc
ggaaacgtctggaggttcccgcacctgtgttacagaagtggaggaggtgcttttctcatc
ccgtatgtgatcatgctcttcctttgtggtattcccttgctttttatggagtatgcaatt
gggcagtatactcgcttaggacccattcaggcactgcacaaaatctgcccacttcttaaa
ggtgtgggactggctacagtggtcatttcatttgttcttgcaacctactataatgttctg
atggcctgggctctctactacctcttcaactcgttcacctctccatttccctggcagtct
tgcaacaacacctggaacaccccaaactgttccactggctttgctggcaatgccactaac
atgaagtcttccagtcagcagttttttgaccataggcttctagagattacagaaggcatt
gagaaagctggaggaattcgctgggagttgtttggccttctcacacttgcatggatcatt
gtcttcttctgcatctttaaaggagtaaaatccactggaaaggtcgtgtatttcactgcc
acgttcccttatattatactgtttgcactgctaatcaataatgttcagctgcctggagca
aaagatggcatcctctactttcttatgcccaactggaataaactccttgaagtgcaggtt
tgggtgaatgcagcagcccagatttttaactccattggaattgcttttggctccatgatt
tctatggccagctacaacaaatacaacaacaatatccttaaagacacatttgttgtttct
ttggccaactcggctaccagtatcctggctgggtttgtgatcttctctggcatcggttac
atggcacacattcataacctgcctgtagatgacatagctactgatggtccaggtttggtg
tttgtggtgtacccagaagcattctcaaccatgcctgtatcacaactatgggctcctgta
ttcttctttatgctgctctgccttggactggacagtgagtttgcgatggtcgaggtggcg
gtgacatgcatcatggatggttttgggccgaaggttttgcgttggtttaagaggaaggaa
ctggtcgtgctggctgtgtgttctgtaggatttctgtttggaatcccacacatcaccagg
ggtggtatctatgtgttccagctgatggatcactacactgcagttgtgtctctcatgttt
ctggccttctttgaggttctagcagtcacactgatctttggagttaagaagatctgtttg
atggtggagagcatgacaggaaaaaggccgaacctgtacttccgtgtatgctggcagttc
atctctcctatgctggtgttgggaattctaatctccagcatcatacagtacactcctgca
cgctatggtaaatcttactcataccctctgtgggccgaagtgttgggctggttcatttcc
ctcatctctataatctggatcccacttggggcaattcatgaaatctggagaaataaagga
tctttccttcagaggctgaaagtggcacttacacccacgctgcagctggagcctgaatac
acaaccaagaaccaacagtctttaacactgtttaacacttctttgtga
DBGET
integrated database retrieval system
