Trichomycterus rosablanca: 134335748
Help
Entry
134335748 CDS
T09921
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134335748 (tmc1)
03037 Cilium and associated proteins [BR:
trn03037
]
134335748 (tmc1)
Transporters [BR:
trn02000
]
Other transporters
Pores ion channels [TC:
1
]
134335748 (tmc1)
Cilium and associated proteins [BR:
trn03037
]
Other cilia and associated proteins
Stereociliary proteins
134335748 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
134335748
NCBI-ProteinID:
XP_062874412
LinkDB
All DBs
Position
21:complement(20772309..20781952)
Genome browser
AA seq
904 aa
AA seq
DB search
MDVRLLRSKMQRQKLIARENDEDKDVFSLYYVGIDRDIKGQRSMDHKSKDKTSQVDTGRV
VTLQNGFKNGISGREEVDGLKDRKNSKNKRNKKQQEAEDIVKEGEDEKKPQTEHEQEEGK
KRRKRRNFKENVSECDESSSSEEELEDDEDQFMSGSLNEEMLEKLREIVEEKKRLISTLR
AKPWPMHKKLSVLRKSQAFLEKYEGALGGDKARKLYSYKIKMRKKWMKLRRNLHNFRMLC
VPWEMKIKNIESHYGSSVASYFLLMRWMYGINVIVFCVNLCLIVFPEVLMGQPYGSIPRK
SLSRKELPTAMDLDVLWDVGGYIKYTGLFCGYYNNQRTIGWLKYRMPLAYFLVGLGGIVY
SYMVVIQHMAQNTSEGCLGDDTNFDYCWKIFTSWDYLIGNPETADTKFAAISTNIKESIM
DEKEPKKDENVHLTRLFRVLANFLIFCVLTGSGYLIYFVVRRSGKFIKDGMDNFGWWERN
EVNVVMALLSVFCPMLFEVIGTLENYHPRIGMRWQLGRVFALFLGNMYSFIIAIIDQIRY
SRDEEQELRHNITMWEATSHNGTLAGNFTSSQVFKVDPADIPRGPCWETLVGQEFVRMLI
TDSLTLYGVVLVNDFVRAVFVRVFNHCWCWDLEYSFPCYSEFDVSGNVLNLIFNQGMIWM
GSFYVPGLPGLNLIRLQISMYLQSWSVMCCNIPQSNFFKISRSNNLYMAMLLAILFLSTV
PTIFTIVSMQPSVDCGPFSGKGHIYDVIPEMIQADFPVWFAKVFSHISNPGLVLSVLLLI
MLTVYYLQATSKSYRQANSELKKKLRAQVQETRMKTRLVAKKTAEFLDQAKSNGEIQHER
QINDCAAENGMENGRQNFHHVRPAQGHRTGRRLAFADTEGPPHTRPPAPQSSHVHGPVPG
TPAS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacggctactcaggagcaaaatgcagagacagaagctcatcgcacgggagaat
gacgaagataaagacgtgttcagtctttactacgttggaatagaccgagatataaaagga
cagagatcaatggatcacaaaagtaaagacaaaaccagtcaagtcgacactggacgagtg
gtgacacttcagaatggattcaagaacgggatctcaggacgagaggaagtggacggtctg
aaggacagaaaaaacagtaagaacaagaggaacaagaaacagcaggaggcggaggacatc
gtgaaagagggtgaagatgagaagaaaccccaaactgaacatgaacaagaagaaggcaag
aagagaagaaaaaggagaaattttaaagaaaacgtgtctgagtgtgacgagagctcttca
tcagaagaggaactggaggacgatgaagatcagtttatgtcgggctccctgaacgaggag
atgctggagaagctgcgggagattgtggaggagaagaagagactcatcagcacactgaga
gccaaaccctggccaatgcacaagaaactctctgttctcaggaagtctcaggcttttcta
gagaaatatgaaggcgctttgggaggagacaaagcccggaagctctattcctacaaaatc
aagatgagaaagaaatggatgaagctccgaagaaaccttcataacttcaggatgctctgc
gttccctgggagatgaagatcaagaacattgaaagtcattacggatcctcggtggcctcc
tactttctgttaatgcgctggatgtacggcatcaacgtgatcgtgttttgcgtcaacctc
tgcctcatcgttttcccagaggtcttgatggggcagccatatggaagtattcccaggaag
tctctgtccagaaaggaattacccacagccatggaccttgatgtactgtgggacgttggg
ggctacattaagtataccggcctgttctgtggctactacaacaaccagagaaccatcggc
tggctcaagtaccgcatgcccctggcttacttcttggttggacttggtggcatcgtttac
agttacatggtggtcatccaacacatggcacagaacaccagtgaggggtgcctgggggat
gacaccaacttcgattattgctggaagatcttcaccagttgggattatttgattggaaac
ccggagacggccgacaccaagttcgccgccatctctacaaacattaaggagtccatcatg
gacgagaaggagcccaaaaaagacgagaacgtccacctgacgcgactgttccgggtcttg
gccaacttcctgatcttctgtgtcctgacgggaagtgggtatctgatctactttgtggta
cgcaggtctgggaagtttatcaaggatggcatggacaactttggctggtgggagagaaat
gaagtaaacgtggtgatggctctgttgagcgttttctgtccgatgctgtttgaagtcatc
ggtactttggagaattaccacccacgtatcggcatgcgctggcagctgggccgcgtcttc
gctctcttcttggggaatatgtacagcttcatcatcgccatcattgaccagattcgctac
tcaagagatgaagaacaggaactcaggcataacataaccatgtgggaagccacctcgcac
aatgggaccttggccgggaatttcacaagttcacaggtgtttaaagtggatcctgctgac
atacccagaggcccttgctgggagaccttggttggacaggagtttgtccggatgttgatt
acggactctctgactctctacggcgtcgtgctggtgaacgacttcgttcgagccgttttc
gtccgtgtcttcaaccactgctggtgctgggacctggagtacagcttcccttgttattct
gagtttgatgtaagcgggaatgtgctgaacctcatcttcaaccaggggatgatctggatg
ggctccttctacgtccccggtctacctgggctaaacctcatcaggctgcagatatccatg
tacctccagagctggtctgtcatgtgctgcaacatccctcagtccaacttctttaaaatc
tctcgatccaacaacctctacatggctatgctgctggccatcctgttcctctccacggtg
cccaccatcttcaccatcgtctccatgcagccttccgtcgactgcggaccctttagtgga
aaaggtcacatatacgacgtgatcccggagatgatacaggccgatttcccagtatggttt
gcgaaggtgttcagtcacatctcgaacccaggactggtcctgtccgtcctcctgctcatt
atgctgaccgtttattacctgcaagccacgtcaaaatcgtacaggcaggctaacagcgag
ctgaaaaagaaactccgtgcccaagttcaggagaccagaatgaagaccagactagtggcg
aagaagacggcagaatttttggatcaggccaaaagcaacggcgagatacaacatgagaga
cagatcaatgactgtgcagctgaaaacggcatggagaacggcagacagaacttccaccac
gttcgtccagcgcagggtcaccgtacgggtcgacgtttggccttcgcagacactgaaggt
cctcctcacacacgaccccctgcgccccagtccagccatgtgcacggaccagttccagga
actccagcgtcatga
DBGET
integrated database retrieval system
