Trichomycterus rosablanca: 134335835
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Entry
134335835 CDS
T09921
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
trn
Trichomycterus rosablanca
Pathway
trn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134335835 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134335835 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134335835 (coro1a)
04147 Exosome [BR:
trn04147
]
134335835 (coro1a)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Phagocytosis
Coronins
134335835 (coro1a)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134335835 (coro1a)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134335835 (coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_EML
WDCP
Trimer_CC
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_RFWD3
eIF2A
CorA
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
DUF7310
BLOC1_2
DUF5798
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
134335835
NCBI-ProteinID:
XP_062874512
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All DBs
Position
22:complement(1749338..1765433)
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AA seq
456 aa
AA seq
DB search
MSRKVVRTSKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFI
VLPLGKTGRIDMSNPTVCGHTGPVLDIEWCPHNDNIIASGSEDCSVMIWEIPEGGLTTPL
KDPVVKLDGHSKRVGILSWHPTAHNVLMTAGCDNVVILWNVARGEAVVRMDSVHTDLIYS
ACWNSDGSQILTSCKDKKLRVLNPRKGTVIAEKEKPHEGSRPVRAVFVSEGKILTTGFSR
MSERQVALWDPNSFDEPLTLQELDTSSGVLLPFFDPDTGIIYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTVGPDSSVEADEWFAGKEGKPILISLKDGFVATTKNKEFKVIKSLMSTPSASGGL
KQTNGADVQALQSEVKELREMVEELTKRVSELESKR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaaggttgtccggaccagcaagttccgtcacgtctttggccagggcgtgaag
gccgaccagtgctacgatgacatcaggatctctcagatgacctgggacagcaacttctgc
tcggtcaaccccaagtttgtggccatgattgtggacgccagcggagggggggccttcatc
gtcctgccgctcggcaagacgggccgcatcgacatgtccaaccccaccgtgtgtggacac
accggcccggtgctggacatcgagtggtgccctcacaacgacaacatcattgccagcggc
tccgaggactgcagcgtcatgatctgggagattccggaaggcggtctgacgacccctctg
aaggacccagtggtgaagttggacggtcactctaaacgtgtgggcattcttagctggcac
cccacggcacacaacgtcctgatgacggcaggctgcgataacgtggtgatcctgtggaac
gtggcccgcggcgaggccgtggtgaggatggactccgtacacaccgacctgatctacagc
gcctgctggaacagcgacggttcgcagatcctcacgtcctgcaaggacaagaagctgcgc
gtgctgaacccgcgcaagggcaccgtcatcgccgagaaggagaagcctcacgagggctcg
aggccggtcagggctgtgtttgtgtccgagggtaaaatcctgaccaccggattcagccgc
atgagtgagagacaggtggcgctgtgggacccgaacagctttgatgagccgctcaccctg
caggagctggacaccagcagcggcgtcctgctgcccttcttcgacccggacacgggcatc
atctacctgtgtggaaagggtgacagcagcattcgatactttgaagtgacggacgaggct
ccctacgtgcactacctgtccatgtacagcagtaaagaaagccagaagggaatgggctac
atgcctaagagaggactagaggtcaacaagtgtgaaatcgccagattttataaactgcat
gagcggaagtgtgagcccatcgtcatgaccgtaccacgcaagtccgacctgtttcaggaa
gacctgtaccccgacacggttggtccggactcgtcggtcgaggctgacgagtggtttgca
gggaaagagggtaaacccatcctgatctcactgaaggatggctttgttgccactactaag
aacaaagagtttaaagtcatcaagagcctcatgtccaccccgtcggcctccggtggactg
aagcaaaccaacggagcggatgtgcaggctctgcagagcgaggtgaaggagctgagagag
atggttgaggagctgaccaagcgagtgagtgagctggagagcaagagatga
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