Trichomycterus rosablanca: 134335864
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Entry
134335864 CDS
T09921
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
trn
Trichomycterus rosablanca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
SH3_1
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
134335864
NCBI-ProteinID:
XP_062874545
LinkDB
All DBs
Position
22:complement(1622089..1690741)
Genome browser
AA seq
2430 aa
AA seq
DB search
MTMPLSPLSSDEEQQKMLGNSQHLYPGAEDEEEEGGEEEEELDEEYGDEDGEEEENGELN
GEEVEEGEEEVLRRGGGGGAGRADGHRGKGTTAARTMRGSNPGHSTNPYSSNPGPAHQPA
ANQQQQKKLRRGSSSALDDTHISLMVFRIGIPDIKQTKCLRFNPEATVWRAKQQVLCSLT
ESLRDVLNYGLFQPATDGHDAKFLEEERPLRDYPQSFEKGVPYLEFRYKTRVYKQTNLDE
KQLAKLHTKASLKKFMDYIQSGAVEKVAKLLDKGLDPNYHDPENGETPLTLAVQCEPGAG
EMIRVLVMAGAHIDFRARDGLTPLHKAVRAHAHTALLTLLSLGSSLDYKDRRGLTPLYHT
VLTGGDTSCCETLLYHRAKIGVRDENGWDETHQACQNGNSQHLEHLLFYGADSSSQNASG
NTALHICALYNKESCARILLYRGANKDIKNNSGQTPFQVAVMSGHFELGEIIKNHRDSDV
VPFLESPKFAPQRRESGRTLAPPHPHPFLRANSDNSMNVPEWLAFPNTATQNIVSVQGLK
HGGTLRSSSSPRGARTRSPSRGRSGERDDRSRQSRRQGPGSISSQGAATGQRRRLYSAVP
GRVFVATHSHTAQGEREISLNKGDKVKVLSIGEGGYWEGTVRGRTGWFPSECVEEVAPRS
LDHRSDSRSEKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQ
TPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ
GGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSELEEMVDRASAPW
KKKPELESSQATEKKRTVYQMALNKLDEILAAAQQTISTGETPVPRTQGMKRERGRGFYN
ESNYDQLGMVLPSSGAGLGYGRVPFASGHAPQHGMLRQKSIGVPEEEKQFLHPPAMKFTR
SLSVPGPEEIPPPPTTAPPEPPFSSAPPLGWRGKTSQQPAVSQSTATSAHYQLYSQSSHY
AHGPRDRSPGPPTSSAVTDSATSYSHAQAHPSVPTRTASRKVMGYTGETSGAGGAASVRS
AGLRRGYSNAVPPTSVATVIPQQQQTAQSQVARTERTVAATAAAGVAKAVPRRGKGPLVK
QSKVEDLRSGQSTLVGKGSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSVEAEPPLPGESD
SSKPAPVVPPPAPNIPPPEPPSVPPPPPPSLPLLRAQENLDYTSQFGAAIVGAARRDRER
FHEARRKSASFFLSAEEELGGSAGLGGMGRSPGSQQQLQQQQLSSQPSPRLRPSKSIDEG
MFSGDTFIQHTRSMPPAFGLPEYSTQVPPGDYQPKSVPADFYLGASRQQPQQQQPPTTTF
IHPLTGKVLDPSSPLGLALAARERALKDDGRMRRERTSDHHFTRQLSSVGPFPSSAAPPA
SVLSYSVAPSSSIGASAAQSSSTSSYLVTSSSLAATTTSTRPPSPRILRRAGGGWDEEAG
ERSEREAAPSREGLRVRFSEDKTVHTHHYQSQHYQPTQKERERERQRERSRERERERERE
MDRIQGHQQPSTQQTPQQPRRPSFLRMESEAGPYILSLTPPSPPNVMPTRQTAGGGPVRE
GGSGMGMMVLPPPAPSVDADDEFVFAEPLPPPLEFANSFDRGVGYSGMMANNLATRQQQH
HSVAPHPPPPPPPPPAKETFMTGIPAHTPLPSPQAADSTTSSLTSYDSEVANLTQSAPSP
SSASPNPPPPPSPSTLQPSGPPPPPSVSPPPPPSYHRPSGLSQSHHLYNNTPATRRALSP
TPPPSSIPAPPAYRGATSTPATSAPLRGTSGLSMTTTCAAETTTATTVAIVASTAAAVSL
HTQRIATVSTVAMGSRSRRSSTEHHPPPPTTRVKSGESQETVVDSGIEELDSRSSSDHLD
SILALSGGSVRERMERAGMGGFSGGGAESDRISGADFLESYMSYLDGQTFEMHNTKAASS
ASTYPKTQRYREVSRDLARQTSTAPPAYHRRREEEEPEEENGEEEDTRDGYSMREGQGLS
RSAVMYFDRPRTPEIKPLWGEGLTGATQVVAESGAQAMGTYLDGRKVHPPVSSMKASIIT
ELSTKLQQRGKGMESWGSQRSLSRHRFSEDSTGALSPPSARSPSPSPLAQPVLSPSPTAS
SHPPLYPNWARSPSPQPPGASSQPSTAAPGTTSRSHSPVSPSAYAPYPTSPKHRPVYRSK
ALEFQFIPSRETRKAESQRRRAPSPLISPSERPKLGPPRPSSLPILPTSPLYSSLYDLRG
SITPPSPANPLGDAYFSPSPPLFAPSGAPPPPNSSLVVSRSLSPTHFLSGTSSPPLHSIA
PPTCLSYPHLPPPSPSKPFASKPLPYWTKYDVADWLAYLNLAEHRERFLDNEIDGTHLPS
LTKDDYLDLGVTRVGHRMNIERALRRVMDR
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccactcagccccctctccagtgacgaggagcagcagaagatgctggggaac
agtcagcacctgtatccaggggcggaggacgaggaggaggaggggggcgaggaggaggag
gagctggacgaggagtacggggacgaggacggagaggaggaggagaacggagagctgaat
ggtgaggaggtggaggagggtgaagaggaggtgctcaggagaggaggaggaggaggagcg
gggagggcagacgggcacaggggaaaaggcacaacggctgcacgtaccatgagaggttcc
aacccgggacacagcactaatccctattcatcaaaccctggccccgcccaccaaccggca
gccaatcagcagcagcagaagaagctgagaaggggctcgagctccgccctcgacgacaca
cacatctcgctgatggtgtttcgcatcggcatccccgacatcaaacagacgaaatgtttg
cggtttaacccggaggcgacggtgtggcgggcgaagcagcaggtcttgtgcagcctgacc
gagtcgctgagagacgtcctgaactacggcctcttccagccggccacggacggacacgac
gccaagttcctggaggaggagaggccgctccgagattacccacagtccttcgagaaagga
gtgccttacctggagtttcgctacaaaactcgagtgtacaagcagaccaacctggatgag
aagcaacttgccaagctgcacactaaggccagcctgaagaagttcatggactatatacaa
tcaggagcagtggagaaggtggccaagctgctggacaaaggactcgatcctaattatcac
gaccctgaaaatggagagacccccctgacgctggcagtgcagtgtgagccgggagcagga
gagatgatcagggttctggtgatggctggagcacacatcgacttcagggccagagacgga
ctcacacctctgcacaaggccgtccgagctcatgcacacaccgctctgctgactctgctg
tctctgggatcgtctctggactataaggaccggcgcggcctgaccccgctctaccacact
gtgctgacagggggcgacacgtcctgctgcgaaacgctgctctatcacagagccaagatc
ggcgtgagggacgagaacggctgggacgagacgcaccaggcctgtcagaacggcaactcg
caacatctggagcatcttctgttctacggcgccgactcgtcctcccagaatgcctcagga
aacactgccttgcacatctgtgctttgtacaataaggagagctgcgcccggatcctgctg
tatcggggagcaaacaaggacatcaagaacaacagcggacagacgccgtttcaggtggca
gtgatgtcaggtcacttcgagctaggcgagatcatcaaaaaccatcgagattcagacgta
gtgccgtttttggagtcaccaaagttcgcaccccagcggcgggagagtgggcgcacgctg
gcaccgccccatccacacccgttcctacgcgccaacagtgacaacagtatgaatgttcct
gagtggctggcgtttcccaatacagccacgcagaacattgtctccgtgcagggtctaaaa
cacggcggtacactgcgcagctccagcagtccacgtggagcccggacccgctcgccgtcc
cgtggccgaagcggagagcgagacgatcgcagcagacagagccggagacaggggccgggc
tccatcagttcacagggagcagccacgggtcagcggaggcgtttgtacagcgccgtgccg
ggccgagtgtttgtggccacgcactcacacacggcgcagggcgagcgcgagattagcctc
aacaagggagacaaagtcaaagtactgagcatcggcgagggaggatactgggaggggacg
gtcagaggacggaccggttggttcccctcggaatgcgtggaggaggtcgcccctcgtagc
ctggaccaccgctcagacagccggagtgagaaagccaagagactcttccgtcattacacg
gtgggatcgtacgacagctttgatgcacccagtgactacataatcaaggagaaaacggtg
ctcctccagaaaaaagacagcgagggtttcggctttgtgctgagaggcgccaaggctcag
acccctatagaagagttcacacccaccccggccttcccagctctgcagtacctagagtca
gtcgacgagggaggcgtggcgtggagggctggtctacgaatgggcgacttcctgattgag
gtgaacggtcagaacgtggtgaaggtcgggcacaggcaggtggtcaacatgatccgacag
ggtggcaacagcctcatggtgaaggtggtgatggtgacgcgcaaccccgacatggaggag
ggatcccgaaagaaaattccacagcagagtaagaggctgagcacaccggccatcgcgctg
cgctccaaatccatgacctcagagctggaggagatggtcgacagagcgtcggcaccttgg
aaaaagaaaccagagttggaatcctcacaagctacagagaagaagaggacggtctatcag
atggctctgaataagctggatgagattttagcagcagctcagcagaccatcagcaccggt
gagacgccggtgccacggactcaggggatgaagcgggagagaggacgaggcttttacaac
gagtcaaactatgaccagttaggaatggtgctgccatcgtccggggcggggctgggatac
ggccgtgtccccttcgcgtctggccacgccccccagcacggtatgctgcgacagaagtcc
atcggggttccagaagaggagaagcagtttctccatcctcccgctatgaagtttacacga
agcctttcggtccccgggccagaggaaatccccccaccgcccaccacagctccccctgag
ccccccttctcctcggcaccccctctgggctggagagggaagacgtctcaacagccggcg
gtctctcagtctaccgccacttcagctcactatcagctttactctcaatcctctcactac
gctcacggacccagggacaggtcccccggacccccgacgagttctgcagtcactgacagt
gcaacctcttattcccatgcccaagcgcacccatctgtgcccaccaggactgcctccagg
aaggtgatgggctacacgggagagacttcaggggctggaggagcagcaagtgtaaggtcg
gccggtttgagaagaggctacagcaatgcggtcccacctaccagcgtggccacggtgatc
ccgcagcagcaacagaccgcacagagccaagtggcaaggacagaacgcacagtggcagca
acggcagctgccggtgttgcgaaagcggttccacggagaggcaaggggcccttggtgaaa
caatcaaaggtggaagacctgcgttctggtcagagtaccctagtaggaaaaggctccgtg
gagaagagctccatccccatccctaccatcatcgtcaaagccccgtccaccagcagtagt
gggcgcagtagtcagggaagcagtgttgaggctgagccaccccttcctggagagagcgac
agctccaaacccgcacccgtggtgccccctcctgcccccaacataccccctcctgagcca
ccctcggtacccccgcctccacccccttcattgccgctgctcagagctcaggagaacctt
gactacaccagccagtttggcgccgccatcgtaggagcagcccgcagagatcgtgagcgc
tttcacgaagcccgaaggaaaagcgcatcattttttctttctgctgaggaagaactcgga
gggagtgctggtcttggtggaatgggaaggagtccaggctcccagcagcagcttcagcag
cagcaactaagctctcaaccctcaccccgcctgagaccctcaaagtctatagatgaaggc
atgttctcaggagacacgtttatccaacacacccgcagcatgccacctgcatttggcctg
ccagagtactccacacaggtaccaccgggggactatcagcccaaatctgtacctgctgac
ttttacctgggagcaagccgtcaacagccacagcagcaacagcctcccaccaccaccttc
atccacccactgacggggaaggtcctggatccgtcgtctcctctaggactggctctggct
gcaagggagcgcgctctcaaagatgatgggcgtatgcgcagagaaagaaccagtgatcac
cattttacccgtcagctctccagtgtggggccgtttccttcatccgctgccccgccggca
tctgttctctcgtactctgttgctccttcctcctccatcggtgcttccgccgctcagtcc
tccagcacctcctcgtaccttgtcacctcatcttcactggctgctaccaccacctccacc
cggcctccgtcacccaggatcctgaggagagcaggaggaggctgggacgaggaggccggg
gaacgatctgaaagagaggccgctccttccagagaagggctaagggttcgattctcagag
gacaaaacagtccacacgcaccactaccagtcgcagcactaccagccgacgcagaaggaa
cgggaaagggagcggcagagggaacgttcccgggaacgcgaaagagagagggagcgagag
atggatagaatccagggccatcaacaaccatccacacagcaaactcctcagcagcctcgg
agaccgtcgtttttgagaatggaaagcgaggctgggccgtacatcctctccctgacccct
ccgtctcctcctaatgtcatgcccacacgccaaacagcaggagggggacctgtcagggag
ggaggcagcgggatgggaatgatggtcctacctcctccggctccctcagtggatgcagat
gatgagtttgtgtttgctgaacctctcccaccgccactggaatttgccaatagctttgat
cgtggagtaggttattccgggatgatggctaacaacctggcgactcgacagcagcaacat
cactcggttgctccccatcctccacccccaccccctccacctcctgcaaaagaaaccttc
atgacgggcatccctgcccacacacccttgccctccccacaggccgctgactccactacc
tccagtcttacttcctatgatagtgaagttgctaacttgactcagtctgccccatcgcct
tcttctgcgtctcccaatcctcccccacctccctcaccttccactctgcaaccatctgga
cctcctccacctccatctgtgtcgcctcctcctccaccgtcctaccacagaccctctgga
ttgtcccagtcgcaccatctctataacaacactcctgcaaccagacgtgccctttccccc
acacctccaccctcctcaatcccagctccacctgcatacaggggtgctacttcaacccca
gcaacatctgcccctttgaggggcacctccggcctctccatgaccacaacctgtgccgca
gaaacgaccacagccactacagttgccatagttgctagcactgcggccgccgtcagcttg
cacacccagcgcatcgcaaccgtttccacggtggccatgggaagcagaagtaggaggtcc
agcaccgagcatcacccaccaccccccacaaccagggtcaagagtggggagtcacaggag
accgtggtggactccggtatcgaggagctggacagccggagcagcagcgaccatctggac
agcatcctggcacttagtggtggcagcgtcagagaaaggatggagagagcaggaatgggt
ggtttcagtggaggaggagcagaaagtgaccggataagcggagcagatttcctagagtcc
tacatgagctatctggacggacagacgtttgaaatgcacaacactaaagcagctagttct
gcctccacgtaccctaaaacacagcgataccgagaggtcagtcgggacctcgcgcgacag
accagcacggctccgccggcctatcacaggcgtcgtgaggaggaagagccggaggaagaa
aatggagaggaagaggacacgcgggatggttacagcatgagggaaggacagggactgtct
cgctccgctgttatgtactttgatcggccccggacacccgagattaagcctctttggggt
gaagggttaactggggcgacccaggtagtggcggaaagcggggctcaggctatggggacg
tatctggacggacgtaaggtccaccctcccgtatccagcatgaaagcgagcatcatcact
gaactaagtaccaaattgcaacagaggggcaagggaatggagagctgggggtcacagcgg
tcactcagcagacacagattctctgaggactcgacgggtgccctcagccccccatcggcg
cgctctccctctccgtctcctctggctcaacctgtcctgtctccgtccccgacggcgtcc
tcccatcctcctctgtacccaaactgggctcgttcgccatccccgcagccgcccggtgcc
tcttctcaaccctcgactgcagcccctggcaccacttcccgctctcattcgccggtctcc
ccctccgcctacgctccctacccaacgtctcccaagcatcgaccagtttaccgctccaaa
gctctcgagttccagttcatcccgagcagggagacgcgcaaggccgagtctcaacgccgc
agagctccgagtcccctcatctcgccgtcggagcgccccaaattgggtccaccacgccct
tcttccctgcctatccttcctacatcgccgctctacagtagtctttatgacctgcgtggt
tccatcactcctccctcaccggcgaatccgctgggcgatgcgtatttctctccgtcccca
cctttgttcgctccctctggagcaccgccgcctcccaactcgtccctggtggtctctcgc
tccctctcacctacccacttcctctccggtacatcctcaccacctttgcactctatagcc
ccgcctacttgtctaagctaccctcacttgccgcctccatccccctccaagcctttcgcc
tccaagccgctgccctattggaccaagtacgacgttgctgattggctagcgtacctaaat
ttagccgagcacagggagcgctttctggacaacgagatcgacgggacgcacttgccctcg
cttaccaaggatgactacctagacctgggtgttacccgcgtggggcaccgtatgaatata
gagcgggcactccggagggtaatggacaggtga
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integrated database retrieval system
