Trichomycterus rosablanca: 134335959
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Entry
134335959 CDS
T09921
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
trn
Trichomycterus rosablanca
Pathway
trn04136
Autophagy - other
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134335959 (wipi1)
04136 Autophagy - other
134335959 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134335959 (wipi1)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134335959 (wipi1)
Membrane trafficking [BR:
trn04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
134335959 (wipi1)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134335959 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
CPSF_A
Beta-prop_WDR35_TULP_N
EIF3I
BCAS3_WD40
RMC1_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
134335959
NCBI-ProteinID:
XP_062874683
LinkDB
All DBs
Position
22:complement(488010..497566)
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AA seq
443 aa
AA seq
DB search
MESGDGVGAARGPPALRCASFNQDSTSLAVGTKDGFRLFSVTAVDKLECIHESAENPDVY
IVERLFSSSLVVVVSRSVPCRMNVYHFKKGTEICNYSYSSSILAVRLNRQRLVVCLEESI
YIHNIKDMKLLKTLLNTPPNPSGLCALSINHSNSYLAYPGSTSIGEIIVYDAISLNTVTV
IPAHDSQLAAITFNATGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKRYVNISSLSFS
PDSQFLCASSNTETVHIFKLEQHTPSGEEDNPSWSAYVGKMFSAASSYLPAQVSGMMSQD
RAFATVRLNTNNHKHTCTLTTIQKLPRLLVASSDGQLFIYNIDPQDGGECTLVQTHRLLG
SDEEPEVCEGSAVPSYAAATAIGTSGPVSATLTGYSEDGGVMKGEVIPEHEFAAGPVCLD
DETEFPPINRCRDGSRRDRIGRP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggagatggagtcggtgcagcccgaggccccccggcactgcgctgcgcctcc
ttcaaccaggactccacgtcgttggctgtgggcactaaggacgggttcagacttttctcc
gtcacggctgtggataaactggagtgtattcacgagagcgcagagaacccagacgtctac
atcgtggaacgtctgttctccagcagcctggtggtggtggtgagccgctcggtgccgtgc
cgcatgaacgtctaccacttcaaaaaaggaacggaaatctgcaactacagctactccagc
agcatcctcgccgtgcgcctcaaccgacagaggttggtggtttgtctggaggagtccatc
tacatccacaacataaaggatatgaagctcctgaaaactctcctgaacaccccacccaac
ccctcaggtctctgcgctctctccatcaaccattccaactcgtacctggcgtatcccggc
agcaccagcatcggggaaatcatcgtctacgacgccatcagtctgaacacagtgactgta
atcccagctcacgacagtcagctagcggccatcaccttcaacgctaccggaaccaaactg
gccagcgcttctgagaggggtacggtgatccgggtcttctccattccagagggacagaga
ctgttcgagttccgcagaggaatgaaaaggtacgtgaacatcagctccttgtcattcagc
cctgactctcagttcctttgtgcatccagcaacacggagaccgttcacatcttcaaactg
gaacaacacacacccagtggggaggaggataacccctcatggtctgcgtacgtggggaag
atgttttcggcagcgagcagctatttacccgcacaggtttcaggaatgatgagtcaggat
cgagccttcgccaccgtccgtctcaacacgaacaaccacaaacacacctgcactttaact
acaatccagaagcttccgcggctcctcgtggcctcgtctgacgggcagctcttcatttat
aacatcgaccctcaggacggaggagagtgtacgctggtacagactcacaggttgttggga
tcagatgaagaaccggaggtgtgcgagggttccgccgttccgtcttacgctgccgccacc
gccatcggaacctccggacccgtttctgccacgctgaccggttactcagaggacggaggg
gtgatgaagggcgaggtgattccagaacacgagtttgcggccggcccggtgtgtctggac
gatgagaccgagtttcctccaataaatcggtgtcgtgacggatctcgccgtgacaggatc
ggccgtccgtga
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