KEGG   Trichomycterus rosablanca: 134336008
Entry
134336008         CDS       T09921                                 
Symbol
elob
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
trn  Trichomycterus rosablanca
Pathway
trn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134336008 (elob)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:trn04121]
    134336008 (elob)
   03400 DNA repair and recombination proteins [BR:trn03400]
    134336008 (elob)
Ubiquitin system [BR:trn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     134336008 (elob)
   Cul5 complex
     134336008 (elob)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     134336008 (elob)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 134336008
NCBI-ProteinID: XP_062874753
LinkDB
Position
22:complement(1857412..1865729)
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRPPEEQRLYKDDMLLDDGKTLGDC
GFTNQTARPQAPGTVGLAFCISDDSFEPLRVEQFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgtttttgatgatcaggcgtcacaagacgaccatcttcaccgatgctaaggag
tcgaccacagtctacgagctcaagcgtatcgtggagggcatcctgaagcgtccgccagag
gaacagagactgtacaaggatgacatgttactagatgacggtaagactctgggagactgt
ggattcacaaaccagacggcgagacctcaggctccaggcacagtcggactggccttttgt
atcagcgatgattcattcgagccactgcgagtggagcagttctcgagtcctcccgagctc
ccggacgtcatgaagcctcaggactccggcagcacggccaacgagcaggcggtgcagtga

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