Trichomycterus rosablanca: 134336119
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Entry
134336119 CDS
T09921
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03013
Nucleocytoplasmic transport
trn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134336119
03015 mRNA surveillance pathway
134336119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134336119
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134336119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
134336119
NCBI-ProteinID:
XP_062874878
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All DBs
Position
22:6897176..6903754
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AA seq
283 aa
AA seq
DB search
MAPSPTKRRERSEDKSRERGKDKAVVKEGAEKDRSRDKNRKRRSNSTGSSSSRSSSSSSS
SSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSGSPSPSRRRHDNRRRSRSKSKSQK
RVEEKERKRRSPSPKPTKLHVGRLTRNVTKDHIQEIFSTYGKIKMIEMPSDRCHPNLSRG
YAYVEYETADDAQKALKYMDGGQIDGQEITATAVLTQKLRPAPRRMSPPRRMPPPPPMWR
RTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcacctaccaaacgcagagaacgttcagaggacaaatctcgagagaggggt
aaagacaaagctgtggtgaaagaaggtgccgagaaggaccgcagcagggacaaaaatcgc
aaacgacgcagtaactccaccggtagcagcagcagcaggtcgagttccagctccagcagc
agctctggttccagctctggttcttccagtggctccagctcctcttcaggctccagccgc
tccggctcatcaagctcgtcacgctcctccagctcctctggctcttcggggtcacccagc
cccagccgtcgccgccatgacaaccgcagacgctcacgttcaaagtccaaatcacagaaa
agagtggaggagaaggaacgaaagaggaggagcccgagcccaaaacccaccaagcttcat
gtcggaaggcttactagaaatgttaccaaggatcacatccaagaaatcttctctacatat
ggaaagatcaaaatgattgaaatgccatcagaccgctgtcatccaaacttgtcccggggt
tatgcttatgtggaatatgaaactgcagacgatgcccaaaaagccctaaaatacatggat
ggaggtcaaatcgatggtcaggaaatcacagcgacagctgtcctgactcagaagctgcgg
cctgcacctcgcagaatgtctcctccacgcaggatgcctcctcctccacccatgtggcgg
cgcactccaccccgcatgagaagaaggtctcgttcgccacgccgtcgatctccggtgaga
aggcgctctcgctccagatctcccggtcgcagacgccatcgctctcgctccagctccaac
tcctcaagataa
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