Trichomycterus rosablanca: 134336153
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Entry
134336153 CDS
T09921
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
trn
Trichomycterus rosablanca
Pathway
trn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134336153 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134336153 (abca3b)
Transporters [BR:
trn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
134336153 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
RsgA_GTPase
AAA_23
AAA_15
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
134336153
NCBI-ProteinID:
XP_062874919
LinkDB
All DBs
Position
22:6792391..6835230
Genome browser
AA seq
1708 aa
AA seq
DB search
MAVLRQFGLLLWKNYLQQKRQILVTLVEIALPLLFSAILIVLRQKVTFTNYPNATHYNSF
SLEWPPSRLPWGLQLAYVPGNSSVVRQVAEDVQLSLERGFISAVRGFETENQLEEFVKTD
PKSGKILAAVVFEHSFTQDEEPLPLQVNYHLRFTYSPRNAPTKEKSELNPNNDLDWHTSS
LFPLFQLPGPREQHDSHGGTPGYYREGFLMVQHAVDRAIMRAYNRTAAAALFAQTRVVLS
RFPYPAFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWL
HWSAWFLMFFLFLSISIFFVTLLICVRVSPNGAVLTHSDPTLVFVFLLVFAVATISFSFM
ISSFFSRANVAAAVSGFLYFFSYLPYLFLSPRYDLLSHAQKTSSCLISNVAMAMGAQLIG
MFEGKGTGIQWSNLFEPVTVDDDFSMAQVLGLLLLDALLYSLVAWYVEAVFPGEYGVPRP
WYFFVLPSYWCNSPRVALLKEKEDEEDAEKAQKGEFIEEEPNGLVSGVKIKHLAKVFKVG
SKTKEAVKDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMA
LIRRSLGLCPQHDVLFDNLTVREHLLFYAQLKGYPREKIPDEVDRIIRILNLEDKRNSRS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHF
MDEADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDSLCNVSEISRLVHMYVP
NATLESSAGAELSYILPKESTNRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTMDDASSTSGMTDVTDFTDSGTLISEDCSNIKLN
TGAKLYLQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVVSLVVARTLPGQHNTPQLQL
ALSRYGPTTVPVALDSNAGPLATALAEAYAAQLSALSATPKTNITDISEYVLTNTVREGG
AFNEHCVVGAAFRGHSSKFAEITGYFNNQGYHTAATALLLVDNALYRLLAGPNASIQIGN
NPMPRNLSETAQSQLSEGQTGFAIAINLMYGMASLASTFSLLLVIERSIKSKHVQWVSGV
YLSNFWFSALLWDLINFALPCLLMLIVFGAFGVKAFVEENHLVDVLLLLLLYGWAVIPFM
YLLSFLFSSAATAYTRLTIFNIISGTATFLAVTIMTIPELHLQDLSNLLDKIFLLFPNYC
LGMSVSQFYQNYETISFCTTNFLTKEICKIYNITYQLNYFSMEKPGVGTFVVAMSLQGVV
FLILLFAIELRFVNTLLNLFRRRKKALLVGEEALQPEDRDVADERKRVLECQPMVESMVC
SPLILQELTKVYPGSQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSG
DAFIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSSCVENV
LRSLLLEPHADKLVRNYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRECGKAVIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKIRLE
TDVEEMDLQLFKDFIESTFPGSLLKDEHQGMVHYHLTDRKQTWAQVFGTLEAAKEKYCIE
DYCVSQISLEQVFLSFAQFQHFSEGRLK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttgcggcagtttggactgcttctttggaagaactaccttcagcagaagcga
cagatcttggtgaccctggtggagattgcgctgcctcttctcttctccgccatcctgata
gtgctacgtcagaaggtgacgttcaccaactaccctaatgccactcattacaacagcttc
tccctggaatggccaccctcccgtctgccctggggcctacagctcgcgtacgtgcccgga
aattcgagtgtggtgcggcaggtggctgaagatgtacagctcagcttggaacggggcttc
atcagcgctgtgcgtggcttcgagacagaaaaccagctcgaggagtttgtcaagacagac
cctaaatcaggcaagatcttggcggcggtggtcttcgagcactccttcacgcaggacgag
gagcctctgccactccaggtcaactaccacctgcgtttcacctatagcccccggaacgcc
cctacaaaggaaaaatcggagttaaatccaaacaatgacctggactggcatacatctagt
ctttttccactcttccagctgccaggacctcgagagcagcatgattcccatggaggcaca
ccgggttattaccgtgaaggtttcctgatggtccagcatgccgttgaccgggccatcatg
agggcttacaaccggactgcagcagctgccctcttcgcgcagacacgggtggtgctgtca
cgttttccctacccagccttcatctatgatgtcttcatcctggcaatccaaaaccagctg
ccccttctactggtgctcagctttacttacacatccctgaacatcgtccgtgccgtggtg
caggagaaagaaaggaaactgaaggaatacatgagaatgatgggactcagcaactggctc
cactggtctgcctggttcctcatgttcttcctttttctttccatctccatcttctttgtc
accctgctgatttgtgtccgggtgagtccaaacggagcagtgttgactcatagcgacccc
acgctggttttcgtcttcctcctggtctttgccgtggctaccatcagcttcagcttcatg
atcagctcctttttctccagagccaacgtcgcagcagcggtcagcggcttcttgtatttt
ttcagctacctgccgtacctcttcctgtcgccgcgctacgacctgctgtcgcacgcccag
aaaacatcctcatgtctcatctctaacgtagccatggctatgggagcccagctgattggc
atgtttgaaggcaaagggacggggattcagtggagcaacctgtttgaacctgtgacggtg
gatgatgacttctccatggctcaggttctcggccttttgctgctggacgctcttctgtac
agcctggtggcgtggtacgttgaagccgtgttccctggcgagtacggagtgccccgaccc
tggtactttttcgtgctgccctcctactggtgcaacagtcctcgagttgccctgctgaaa
gaaaaggaggatgaggaggatgctgagaaagcgcagaagggcgagtttatcgaagaggag
ccgaatggattggtttctggggtcaagatcaagcacctggccaaggtttttaaagtgggc
agtaagaccaaagaggcagtgaaggatcttacactgaacatgtttgaaggtcagatcact
gtgctgcttggacacaacggagccggcaagaccacgacactctccatgctgacaggcttg
tttcctcccagcagtgggcgtgcctacattaacggctatgatatttgccaggacatggca
ctgatccgccgcagcctaggactgtgcccacagcacgatgtgcttttcgacaacctcacg
gtccgggagcacctgcttttctacgcacagctgaagggctacccacgcgagaagattccg
gacgaggtggatcgcattatacgtatcctgaacctagaggacaagaggaactcccggtct
aaaactctctccggtggaatgaagcgcaagctctccattggaatcgctctcatcggagac
tcaaaggtggtgatgctggatgagcccacttcaggcatggacccgtcagccagacgagcc
acctgggatctcctgcagggtgagaaacggggccgcaccatcctgctcaccacgcacttc
atggatgaggccgacctgctgggagatcgtatcgccatcatggccggaggagagctccag
tgctgtggctcgcccctctttctcaagaacaaatatggtgctggctaccacatggtgata
gtaaaggactcgttgtgtaacgtatcggagatcagccgccttgtccacatgtatgttccc
aatgccaccctagagagcagtgcaggagctgaactctcctacatcctgcctaaagaaagc
accaatcggtttgaacttctgtttgctgagctggagatgaacagagaggagttgggcatt
gccagctatggagcgtctgtaaccaccatggaggaggtttttcttagggtggggaagctt
gtggactccagtctggacatccaggccatccagcttccggccctgcagtaccagcatgag
cgcaggtcacatgactggacgatggacgatgccagcagcaccagcggcatgactgatgtg
actgactttacagacagtggtactctgatatcagaggactgctccaacatcaaacttaac
acaggggcaaagctgtacctgcagcagttctatgccatgtttctgaagagggcattgtac
agctggcggaactggaaggtcatggtcgcgcagtttttggtgccactcatcttcacagtg
gtctccctggtggtggcccggactcttcctgggcaacacaatactccccaacttcagctt
gcgctcagccgctatggcccaaccactgtgccggtggctttggattccaacgcgggaccc
ctggctacggcgcttgccgaggcctatgcggctcagctttctgcactaagtgccactcca
aagactaatataactgacatctcggagtacgttctgaccaacacagtaagggaaggagga
gcctttaatgaacactgcgtggtcggtgctgcttttcgaggacactctagtaagtttgct
gaaatcaccggttacttcaacaaccagggctatcacacggcagctaccgccctcctgctg
gtggataacgcgctgtacaggctgctggccggccccaacgcttccatccagataggaaac
aaccccatgcctcgcaacctgtccgagactgcccagagtcagctctcagagggtcagact
ggctttgccattgccattaatctgatgtatggtatggcttccttggccagcaccttttct
ctgctccttgtgatcgagcgctccatcaagtccaagcatgtgcagtgggtcagtggcgtc
tacctctccaacttctggttttcggctttactctgggaccttatcaactttgccttgcct
tgtcttctcatgctgatagtcttcggtgcattcggagtaaaggccttcgtggaggaaaat
cacttggtggatgtgcttctattgctgcttctctacggttgggctgtgatcccctttatg
tacctcctcagcttcctgttctccagcgccgctactgcatacacccgccttaccatcttc
aacatcatcagtggcacggccaccttcctcgctgtcaccatcatgaccattcctgagctg
cacctgcaggacctgtcaaatctcctggataaaatcttcctactcttcccgaactactgt
ctgggcatgtccgtgagccagttctaccaaaactacgagacaataagtttctgcactacc
aatttccttactaaagaaatctgcaagatctacaacatcacctatcagctgaactacttc
tctatggaaaaacctggagtgggcacttttgtagtagccatgtccttgcagggcgtggtc
tttctcatccttctctttgctatcgaacttcggtttgtcaacacactcctcaacctcttc
aggagacgtaagaaggccctgctggtcggggaggaagctcttcagcctgaggacagggat
gtggccgacgagaggaagcgggttctcgagtgccagcctatggtcgagtccatggtgtgc
agccctctcattcttcaagaacttaccaaggtttaccccggaagtcagtccctgctggcg
gtggatcgtttgtctctggctgttgggaagggggaatgctttggcctgctgggatttaac
ggagcagggaagaccactacgttcaaaatgttgactggagacgagtcagtgacttcggga
gacgcctttatcgatggctacagcatcctccgtgatgtgaaaaaggtccagcagaggatc
ggctattgtcctcagttcgatgccgtgctggatcacatgactggccgagagactctgagc
atgtatgcacggctcagagggatcccggagaagtacgtgtcgtcctgtgtggaaaacgtg
ctgcgctcattgctgctggaaccacatgctgacaaactggttcggaattacagtgggggc
aacaaaagaaagctgagcgcaggcatggctctgattggtggaccgcctgtcatctttctg
gacgagccatccactggcatggatcccgtagccaggcgcttgctatgggacgcggtcact
cgtactagagaatgtggaaaagctgttattattacctcccacagtatggaggaatgtgag
gctttgtgcactaggctggctgtgatggtcaatgggcagttcaaatgtctgggcagccct
cagcacctaaagagcaaattcggcagtggttacaccctgttggccaagatccgtttagaa
acggatgtagaggagatggaccttcagctttttaaagacttcatcgagagcacctttcct
ggtagtttactgaaagatgaacatcaagggatggtacattaccacctgactgacagaaaa
caaacctgggctcaggttttcgggacactcgaggctgctaaagagaagtattgcattgag
gactactgtgtgagtcaaatctccctggagcaggtctttctaagctttgctcagttccag
cacttttcagaaggtcgactaaaatga
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integrated database retrieval system
