Trichomycterus rosablanca: 134336184
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Entry
134336184 CDS
T09921
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134336184
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
134336184
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
134336184
NCBI-ProteinID:
XP_062874960
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Position
22:15070510..15153257
Genome browser
AA seq
1956 aa
AA seq
DB search
MQSFRERSGFQGNQHCYQQEPRELSRLENYRHHLGQTGQGYETHSLSAAGMPPAGTASKD
CYGQQNYPSYGSGSAQTKKPYGGGKPPTQHVQSGYSGHVSSGYSAQYMSEGHLPQKWDES
TQMSQYEQEMVGHLEPRPSGSSQYIEQNMLSISQSQCHLPSQPSAPAYTNPHQQGHRPNP
SPSPLMYPQSHVHFPQHARPPSSTSSNYMEKCNSIPHAYKSGFGMPPNVQYSRQMSNHST
LKQSGYRTQNNYGYQQPASRTGFEQQGPMQGIPSTPESHPKFQHYNQSQQNYCITDISVR
SPEQYYQNCSPSSSHSPARSVGRSPSYSSTPSPLMPNPDTFQYGQTINPASSSSSAGLQD
QNMLMPAHTQSSPSVTHHSQSYSSSLKDRFSEKLFSNPSLWSLNALTSQVENISNNVQQL
LLSEALMANKKNGKRNQPKKGEDYRGQLKAMEDSSCPESQHGSLTNDTFDTPRSLSSVVQ
EGGYSSSTEDQMEQNYYYFGQGKGPTQASAHSQLSLDTVSTCSMNSADDMSVRSGDSDRS
LRSTTSEGHLNCDPKMQRVPIVEEQNSSLGSLREERSPISVTATSPMKQESNSRLGIKQP
EITQKENLEKSIWTERTTDEKKIGPINLPTEHECKEGVLEETEKQQEWPEDEKFPSLIHK
MNKAVTNERYSYETGDTIYQNLESKYDREDQDFPGKGFLDVSSKENENEVAEAKSEVFKL
ESQLTIEGLTTSPAISRDSLNSNQSSPEKTEDSDVSYLTPQCEFSEEKLSTSEKQDFFEK
QQFVLLNSSIEVSENEGLPPTHEVVNNKAKQEESFTEACDKPEDKAGGLLVKTDAGETTV
QDIAHRGNERGSAPCDIAPQSHSVKTGFSAFDEKATPQTQARDRIDAKVLEPDSPQLPGK
SIMHSAPSWANTPPSPQKGDEEIEPGISCPSAVMPTTKAEPVAPSAHPRLLGRKHTRGRQ
RLIHSNASIGSQMSVERDVVPPSPQKPDMPSSNSALFSEQMGAVQPDSSQTPKLADVLPS
RMCTRSLGSQGSLKVCNQERRKPVAKPISKPDPKVGPKPGQKPGLKQNVKTDLRPGTKSA
PKLSFKPGTKSSLRSSPKQGSKSGPKQGPKSGPLLTIKTGLKPGPKSSPKTGLKPNEGVT
HKGPGRPRSLNSKTKSLKYKDNIQAHVENMNSTSCISETTTQQENTTATLETVTDTTLCS
TIDSTTGSSLDTEIDASFVNSEAKDQKSMVLRSRKQTQGKLSEQKEKRKETLAAEASAIR
LTETHTQEVAVAHPCQNQKSSIHENICADSLSLPNEKIISVPVKRKSSLKFKGPINKKKD
QKGSQPVQQSLLQDTRGTKGRRKQGHTLEPSICSTMTKESLPFEDDTSSLPPQGPTKTKY
LPPRKGRGLKYEAMVQKIASPISKKQPLPIQPDATQDELTLKPALEFLVTEKRKSVNTTI
TAPEEGENPVKIEETPEAVGIQTPLKKRRKWAIMEITNAADTLETTSLIINTPRLAKQRA
IKNNHEMHLKQQKKRKGIKLANSVPPVELHEQTQLDMPVPTSVEATLPPASFAPHATDGS
TEPEQLSVELCSRVIEAKRGRRSSNKKKQGEALGQQTVVKRPGIKKKSGLKKMIQQNVNV
VMTTVNESEHKTKRRKEIPTVKGKLFSKDVFQPQESGIKRSFKPYVHIDGSRKTASFCTI
VNRPEEEHLLTVKKAKRKNLVRIKNEATLTKAIPDSTVMLQGPIVNKSLSDKCLVCCLCG
KPANYRELGDLCGPYYPENTIPRKTLSLEYREDFRRNYDEQQDKTTTCTAEQTDILEEKD
TKDFPQEESSKADCKPAMKERRSQLRTRLGLHMRFKRLQLLQGRAVKGAPSAGEEDCYSA
LQRLQLEAEVNEHWAHVSCAVWTSGVILIAGKLYGLKEAAQDSAHTKCFTCQREQASISC
SWNNCTYKYHYVCAKETGCIFDEETFSIKCPNHQAI
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgagagcggagtggtttccagggcaaccaacactgctaccagcaggaa
cctcgtgaattatctcggcttgagaattacagacatcatctcggccagaccggacagggc
tacgagacacactcgctttctgctgcagggatgccaccagcaggaacagcgtctaaagac
tgttatgggcagcaaaactaccctagctatggcagcggttcagctcaaaccaagaaacca
tacggaggtggcaaacctcctacccagcacgtgcagtctggctacagtggccatgtgagt
tctggatactcagcccagtacatgagcgaagggcatttgccgcagaagtgggacgagtct
actcaaatgtctcagtacgagcaagaaatggtgggtcatcttgaacctcggcctagcggg
tcatcccagtacatcgagcaaaatatgctaagcatttctcaaagccagtgccatctgccc
tcacaaccgtctgctcctgcgtatacgaacccccatcaacaaggacatcgtcccaatcct
tccccatcccctttgatgtacccacagagtcacgttcattttcctcaacatgcccgacca
ccctcctctacctcttcaaactacatggagaaatgcaactcaatccctcatgcctacaaa
agtggctttggaatgccccctaacgttcagtattcaaggcaaatgagtaaccacagtacc
ctgaagcagagtgggtatcgaactcagaataattacggctaccaacagcccgcatcacgg
actggatttgaacagcaaggtcccatgcaagggattccgagtacaccagagagccatccg
aaattccaacattacaatcagtcccaacaaaactactgcatcacagatatttctgtgagg
tcacctgagcagtactaccagaactgtagtccaagttccagtcactcacctgctcggtct
gtaggcaggtctccctcatacagttccaccccgtctccgttaatgcccaatcctgatacg
tttcagtatggtcaaacaatcaatcctgcaagttcgtcctcttctgccggtctgcaagat
cagaatatgttgatgcctgcacacacccagtcatcccctagtgttacccaccactctcag
agctattcaagctctctgaaggaccgtttctcagagaagcttttttctaacccgagcctg
tggagcctgaatgccctgacatctcaggtagagaacatctctaataacgtccaacagtta
ttactctcagaggctcttatggccaacaaaaaaaatggcaagcgaaaccagccaaaaaaa
ggagaggactataggggccagttaaaggcaatggaggactcttcatgtcccgagagccaa
catggttctctaaccaatgacactttcgacacaccaagatctttgtcatctgtagtacaa
gagggaggatactccagcagcacagaagaccagatggaacagaactactactatttcggt
cagggcaaaggcccgacacaggcctcagcacattctcaactgagtttagacacagtgtct
acctgctctatgaactcggcagatgacatgtccgtcagatcaggcgattcggatagaagt
ctgcggagtacaacctctgaaggtcatcttaactgtgaccctaaaatgcaaagagtgcca
attgtagaagagcagaacagttctctcgggagtttaagagaagagaggtctcccattagt
gtaacagccacaagtcctatgaagcaggagagtaattctcgactaggcataaagcaacca
gagatcactcaaaaggaaaatttagagaagtctatctggaccgagaggacgactgatgaa
aagaaaattggacccattaacctgcctacagaacatgaatgtaaagaaggggttcttgag
gaaaccgagaaacaacaggaatggccagaggatgagaagttcccctccctcatccataag
atgaataaagctgtgacaaatgaaagatattcttacgaaacaggagacactatttatcag
aacctggaaagcaaatatgatagagaggatcaagactttcctggaaagggctttttagac
gtcagcagcaaggaaaatgaaaatgaagttgcagaagcaaaatcagaagtatttaaattg
gaatcacagcttactattgaaggtctgacgacatcaccagctatttcaagagattcactt
aactcaaatcaaagttcacctgagaaaacggaagattcagacgtatcttatctaacccct
cagtgtgagttttcagaggagaaactgtcaacctctgaaaaacaggacttctttgaaaag
cagcagtttgtcttattaaattcatccattgaagtgagcgagaatgaagggttaccacca
actcatgaggtggtcaataataaagcaaaacaagaagagtcttttacagaagcctgtgat
aagccagaagataaagcaggtggacttctggtcaaaacggatgctggagagaccaccgtt
caagacatagcccatagaggaaatgaaagagggtcagccccatgtgacattgcaccccag
tctcactctgtcaagactggcttctcagctttcgatgagaaagcaacacctcagacccag
gcgagggatcgcattgatgcaaaggtgctggagcctgattcgcctcagttgcccggcaag
tcaataatgcactctgcaccctcttgggctaatacaccaccctctccacagaaaggagat
gaagaaatagagccagggattagctgtcccagtgcagtaatgccaacaacgaaagcagag
cctgtagccccctcagcacatccaagactattgggtaggaagcatacccgaggtaggcaa
aggctgattcattcaaatgcatctattgggagccagatgagtgtggaacgagatgtggtc
ccaccatctcctcaaaaacctgatatgccctcaagcaatagtgccctattctctgaacaa
atgggagcggtacagccggacagcagtcaaacacccaaactggcggacgttttaccatcc
cgtatgtgtactcgctctctagggtcacaaggtagcctgaaagtttgcaaccaagaaaga
agaaaaccagttgcaaagcccatttcgaaacctgacccgaaagtaggtccaaagccagga
caaaagcctggtctaaaacaaaatgtaaagactgatttaagacctggtacaaaatcagcc
ccaaagctgagtttcaaacctggtacaaagtctagtctgaggtctagtccaaaacaaggc
tccaagtctgggccaaaacaaggcccaaaatcagggccattgttaactattaaaacaggt
ttaaagcctggcccaaagtctagtccaaaaactggcttaaagcctaatgaaggagtaact
cataaaggccctggacgaccaagaagcctaaattcaaagaccaaatccctaaaatataaa
gacaacatacaagctcacgttgagaatatgaacagcacaagttgcatcagtgaaaccact
acacagcaagaaaatacaacagccactttagaaactgttactgacactactttgtgctct
actatagacagcaccacgggttcctcattagatactgagatagatgcctcgtttgtaaat
tctgaagcaaaagatcaaaaatccatggtattaagatctaggaaacaaacacagggaaaa
ttatcagagcaaaaagaaaaaaggaaagagaccttggcggctgaggcatcagcaattagg
ctcacagaaacacatacgcaggaggtagccgtagcccatccatgtcaaaaccaaaaatcc
tctatacatgagaatatctgtgcagattcactaagcctgccaaatgagaaaatcatctct
gttccagttaaaagaaaatctagtttaaaatttaaaggcccaattaataagaagaaagat
cagaaaggcagtcaaccagtccaacagtctctgcttcaagatacccgaggtaccaagggg
agaagaaagcaaggacataccttagaaccatctatatgtagcactatgaccaaagaaagc
cttccatttgaagatgatacatctagtttgccccctcagggtcccactaaaacaaaatat
ttgcctcctagaaaaggcagaggacttaaatatgaagcgatggttcagaaaatcgcatca
cctatatccaaaaaacagcctctacctatccaaccagatgcaacccaggatgaattaaca
ttaaagccagccctagaattcctggtgaccgagaaaagaaagtcagtaaatactacaata
acggcaccagaagaaggtgagaacccagtaaagattgaggagactccagaagcagtaggt
attcaaactcctcttaaaaagcgaagaaaatgggccattatggagatcaccaatgctgca
gatacacttgagactacgagtctcattatcaacacaccaaggttagcgaaacagagagcc
attaaaaataaccacgagatgcatctaaagcaacagaagaaaagaaaaggaatcaaacta
gcaaacagcgtgccacctgtggaattgcatgagcagactcaactagacatgcccgtccct
acctcagttgaagcaactttaccaccagcttcttttgccccccatgctacagatgggagt
acagaacctgaacagctttcagtggaattgtgctcaagagtcattgaagcaaaaagaggt
agacggtcatcaaataaaaagaaacaaggagaagctctgggtcagcaaactgtagtcaaa
agaccaggcattaaaaaaaagtctgggctgaaaaaaatgattcaacagaacgttaacgtc
gtaatgaccaccgtgaatgaatctgaacacaaaaccaaacgcagaaaggaaatcccgaca
gtcaaaggaaaactgttttccaaggacgttttccaaccacaagagagcggcatcaaacgt
tcattcaaaccgtatgtacacatcgacggctcaagaaagacggcctctttctgcacaatc
gtgaacaggccggaagaagagcacctgcttactgtgaaaaaagcaaaaaggaagaacttg
gtaagaattaaaaatgaagccactttaaccaaggcaattccagactctacagtaatgctt
cagggcccaatagttaacaaaagcctatctgacaagtgtcttgtatgctgtctgtgtgga
aagccagcaaattacagagaacttggagacttgtgtggcccatactaccctgagaacacc
ataccacggaaaacactgtccctagagtaccgagaagactttaggcgaaactatgacgaa
cagcaagacaagacgaccacgtgcaccgcagagcagaccgatattttagaggaaaaggac
acaaaagacttccctcaagaggaatcgagtaaagcagactgcaagccggcgatgaaagaa
agaaggtcacagctccggactcgacttggtctgcatatgaggttcaaaagactgcagctg
ttgcaaggcagagctgttaaaggagctccctctgctggtgaggaggactgttactctgct
ttgcagaggttgcagctggaggccgaggttaatgaacactgggcgcatgtgtcttgtgct
gtctggacgagtggagtgatcctcatcgcaggcaaactgtacggactcaaggaagctgca
caggactctgcacacacaaaatgcttcacgtgccagagagaacaagcctcgatctcctgc
agttggaataactgtacctacaagtatcactacgtttgtgctaaagaaacaggctgcatc
tttgatgaggaaactttttcgataaaatgtccaaatcaccaggcaatttaa
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integrated database retrieval system
