Trichomycterus rosablanca: 134336221
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Entry
134336221 CDS
T09921
Symbol
pecam1a
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
trn
Trichomycterus rosablanca
Pathway
trn04148
Efferocytosis
trn04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134336221 (pecam1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134336221 (pecam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
trn04090
]
134336221 (pecam1a)
00536 Glycosaminoglycan binding proteins [BR:
trn00536
]
134336221 (pecam1a)
04091 Lectins [BR:
trn04091
]
134336221 (pecam1a)
CD molecules [BR:
trn04090
]
Proteins
134336221 (pecam1a)
Glycosaminoglycan binding proteins [BR:
trn00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
134336221 (pecam1a)
Lectins [BR:
trn04091
]
I-type lectins (Siglecs)
134336221 (pecam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
Zwei_Ig_N
V-set
Izumo-Ig
V-set_CD47
C2-set
TMEM132_C
YxzE
Motif
Other DBs
NCBI-GeneID:
134336221
NCBI-ProteinID:
XP_062875008
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All DBs
Position
22:5860967..5871537
Genome browser
AA seq
755 aa
AA seq
DB search
MQRWPFWPSVVLICLLTLWQEAETAFTIDWVKLDLLPGATVNSGTNLTLHCEAKVYHSSS
QLVQTFRFLQNNEVIYSQETSEAVVERSLVPARASNSGSYKCQVQIEKRKKDSQTLSLTV
TGLQTPQLKVHPRFVNEGDEITATCGAPEETGSLSFHFFLNNQELNTQDSKNNSVTIVIK
PDQRGKIQLHCNYRLSLHPSTVSSNNSNNVEIHVQELNITPSIRILPNADVVEGDRVHIS
CNVSGYQRDLNVFLFANTLLHEDSTSFTHSFQVTANDSGRYTCKAEKNNVEKSSTTWLAV
EELFSAPVLKITPEQVFEGQNFHLNCMSYDISKKRINNTDVRYTLFKGQHLLKRSSIYNS
VANKASSGNYTCTAEAKGIRKTSMSLLLNVKVPVSVPVIRTVGPVIIGQPFQLICESQHG
TLPIHYTLLKSHHPVAHTTVTGPLRNALFNISSIRYRNESQSFSCRAQNQGPLYNKSSQA
LSTQEIETVSIPELTLDIKGYMATENTDLRLYCCVHQGTVPITFTWYRIGDSAPLFTTRI
SKTKEMYTINSITSNHKGRYYCEASNDANVTWQSLPVTIGVNWAIWKKALIGVACIFLLV
LIIAILVMFLKKARGPRKQNRAVQVSVKSGHHKSDDPMRISLTLDIEDNAAVNATPCIMG
RNVWSENVSSSESEDESIKDEKMQPYSDSPPMQDVDTNTKEVSQSHQDELPEAPVVHDTD
TEKHEVQECTQGSADQVDQPALEYVQLNHTKVESA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgctggcctttttggccctctgtggtcctgatttgccttttaaccctgtggcag
gaggcagagacagcgttcaccatagactgggtaaagcttgacctccttccaggagccaca
gtaaacagtggcaccaacttgaccttgcattgtgaggccaaggtctaccacagttcctca
cagcttgtccagaccttcaggttcctacagaacaatgaagtaatctactcccaggaaacc
agtgaagcggtggtggagcgcagccttgtccctgccagagcttccaactcaggttcttac
aaatgccaagtccagatcgagaagaggaaaaaagacagccagacactgagtcttaccgtg
acaggtttgcagacaccgcagctgaaagtacaccccagatttgtcaatgagggggatgag
attacagccacatgtggtgcaccagaggagactggtagtctgtccttccacttctttcta
aacaatcaagagttaaacacacaagactccaaaaacaattctgtgaccattgttatcaag
cctgatcaacggggcaagatccaactgcactgtaactacaggctttcgctacatcccagc
acggtatcatccaacaacagcaacaatgtggaaatccatgtacaagaacttaatataaca
ccatcgataagaattttgcccaatgccgatgttgtggagggtgaccgggtgcacattagc
tgtaacgtctcaggctaccagcgtgatctgaacgtcttcctctttgcaaacacgctgctg
catgaagatagcacatcattcactcacagctttcaagtgactgcaaacgactctggaagg
tatacgtgtaaagctgaaaagaacaatgtggagaagtcctccacaacctggctggcagtt
gaagagctgttttcggcaccagttctaaaaattactccagagcaggtcttcgagggacag
aactttcacctgaactgtatgagttacgatatttccaaaaaacgaatcaataatacagat
gtgaggtacactctgtttaaaggccagcatctcttgaaacgcagctccatctacaacagt
gtagcaaacaaagccagctcaggaaattatacctgtacagctgaggctaaagggatccgc
aaaaccagcatgtcattgcttctaaatgttaaagttccagtgtctgtcccagtcatccgc
acagtgggaccagtgataataggacagccatttcagctcatctgtgagagccagcacgga
acgctaccgatccactataccttattgaagtcacaccacccagtggcacacacgacggtg
actggacctctgcgtaatgctttattcaacatctcctctatcagatacagaaatgagagt
cagagcttctcctgccgggcacagaatcagggaccactgtacaataaatctagccaagcc
ctcagtacacaagaaatagaaactgtatccatacctgagctgacccttgacattaagggc
tacatggccacagagaacacggacctccgcctctactgttgtgtgcaccagggtactgtc
ccaatcacctttacctggtaccgcattggagattcagctccacttttcaccacacgcatc
agcaagactaaagaaatgtacacgatcaactccattaccagcaaccacaaaggaaggtat
tactgtgaagcgtccaatgatgctaatgtgacctggcagagtcttcctgtcaccatcgga
gtgaattgggccatttggaagaaggctctcattggtgtggcttgcatctttctgttggtg
ctcataatcgccattcttgtcatgttcctcaagaaagcacgaggtccacgcaaacaaaac
agagcagtgcaggtgtctgtaaagtctggacatcataaatcagatgatccaatgagaata
agcttgacacttgatattgaggacaacgctgcagtcaatgcaactccttgtatcatgggc
agaaatgtgtggagcgaaaatgtgtcgagttcagaatcagaagatgagagcataaaggat
gagaaaatgcagccatacagtgactcgcctcccatgcaggatgtggacactaatacaaag
gaggtgtcgcagtcacatcaagatgaattgccagaagcccctgtggtgcatgatacagat
acagagaagcatgaggtgcaggaatgcacacaaggttcagcagatcaagtggatcagccg
gctctggagtacgtccagcttaatcataccaaagtggaatctgcatag
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