Trichomycterus rosablanca: 134336233
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Entry
134336233 CDS
T09921
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
trn00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
trn01100
Metabolic pathways
Module
trn_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
134336233 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
134336233 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
trn01003
]
134336233 (xylt1)
Enzymes [BR:
trn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
134336233 (xylt1)
Glycosyltransferases [BR:
trn01003
]
O-Glycan biosynthesis
Glycosaminoglycan
134336233 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
FXMR_C2
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
134336233
NCBI-ProteinID:
XP_062875022
LinkDB
All DBs
Position
22:19893069..19957503
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AA seq
904 aa
AA seq
DB search
MMVGGPCARKSARRSRSALIAALTVLLVQTLIVWNFSSLDSGDTGETGETGGVGGGREKR
DRLGVNKAYGEYSRSGGAHRRQHGKAALRQKRQPDVYYSQRPKEKVRVDSNNENSVPKDF
ESVDNSNFAGRLQTQRHATNKRQQEKTKSSNELVHYGLNRTGTGVRPDLALTSHPPKHHE
PQVRRTVGHVPEIKYDQPPKCEITGKEAISALSRAKTKECRQQIAEIYCRHKEKQLMPEK
VTRYCPIDGKASMNVHWEEDSMETVPAVPVRIAFVLVVHGRASRQVQRLFKAIYHTSHFY
YIHVDQRSNYLHRQMLALAKRYPNVRVTPWRMSTIWGGASLLSMYLQSMTDLLSMSHWPW
DFFINLSAADYPIRTNDQLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFFECDTHMW
RLGDRKIPEGIAVDGGSDWFLLNRAFVEYVINSQDDLVTNMKRFYAYTLLPAESFFHTML
ENSPHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQTARPTFF
ARKFEASVNQEIVNQLDAFLFGGYPQGMPGLKAYWENVYDEPDGVHSLSDALLTHYHAFA
RLGLERAVSSLQGDPGNNRCRYYAMGHPVSVHIYFLSDEFQGYLIKHHATNLATSKLETL
ETWVMPKKFFKFTNPPNSFNRLQYAEIGTDWDAKERIFRNFGNLMGPLEEPVGMQKWAKG
ANVTVTVVWIDPTNVIAATYDVLIDSGAEFTHYRPPLNTPLRPGMWTVRVLHHWSPMAET
RFLITPLTHYKHQPIRQEDALKVHNGPAKNSYMEQSFHGLNPILNIPVHLGQVEEAKLNA
GLTGARLERWVDSLVAEVWAAADVCAATPSGCPVLQACRETSWSSLSPDPKSQMGSTKAN
GTIR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggcggtccgtgtgcgcgcaagtcggctcggcgctcccggtcagctctgatc
gcggctctcaccgtgctgctcgtccagacgctcatcgtgtggaacttcagcagtctggac
tcgggggacacgggggaaaccggggagactggcggcgtcggcggcggcagggagaagcgg
gaccggctcggtgtgaacaaagcctatggagagtactcgaggagcggcggtgcgcaccgg
aggcagcacggaaaagcggcgctccgtcagaaacgccaaccggacgtctactactcgcag
cgtcccaaggagaaggttcgtgtggacagcaacaatgagaactctgtacccaaggacttc
gagagcgtcgacaacagcaacttcgcgggacggctgcagactcagcgccacgccaccaac
aaacgccagcaagagaaaaccaagagctccaacgagctggtccactacggcctgaaccga
acggggacgggggtcagacccgacctcgccctcacgtcccacccgccgaaacaccacgaa
ccgcaggtcaggaggacggtcgggcacgtccccgagattaaatacgaccagccgccgaag
tgtgagatcacaggcaaggaggccatcagcgctctgtcccgagccaaaaccaaggagtgt
cggcagcagatcgccgagatttactgccggcacaaagaaaagcagctcatgcccgagaag
gtcacccgctactgccccatagatggtaaggcgagtatgaacgtgcactgggaggaggac
tccatggagacggtgcccgccgtgcccgtgaggatcgccttcgtgctggtggtccacggt
cgagcctcgcgccaagtgcagcggctcttcaaggccatttaccacacgtcacacttctac
tacatccacgtggatcagcgatccaactaccttcacagacagatgttggcgctggctaaa
cgctacccgaatgttcgcgtcacgccctggcgcatgtcgaccatctggggaggtgccagt
ctgctcagcatgtatctacagagcatgacggacctgctgtccatgagccactggccgtgg
gacttcttcatcaacctgagtgccgccgactaccccatcaggaccaatgaccagctggtg
gcgttcctctccaagtaccgcaacatgaacttcatcaagtctcatggcagagataacgct
cgtttcatcaggaaacagggtctggaccggctcttcttcgaatgcgacacgcacatgtgg
cgcctgggcgacaggaagatcccggagggcatcgccgtcgacggcgggtcggattggttc
cttctgaaccgcgcgttcgtggagtacgtgatcaactcgcaggacgacctggtgaccaac
atgaagcggttctacgcctacacgcttctgccggcggagtccttctttcacacgatgctg
gagaacagtcctcactgcgagagcatggtggataacaacctccggatcaccaactggaac
aggaagctgggctgcaagtgccagtacaaacacatcgtggactggtgcggctgttcgccc
aacgacttcaaaccttccgacctgccgcgcttccagcaaacggcccgtcccactttcttc
gcccggaagttcgaggccagtgtgaaccaggagatcgtgaaccagctggacgcgttcctg
tttggaggttacccacagggtatgccaggactcaaagcctactgggagaacgtttacgat
gaacctgatggcgtccacagcctgagcgacgccctgttgacccactaccacgccttcgcc
cgcctgggcctggaaagggcggttagttccctgcagggggatcccggcaacaaccgctgc
aggtactacgctatgggacatcctgtatccgtccacatctacttcctgtccgatgagttc
cagggctacctgatcaagcatcacgccaccaacctggccacgagcaagctggagactctg
gagacctgggtgatgcccaagaagttcttcaaattcaccaacccaccgaacagcttcaat
cggctgcagtacgccgagatcggtacagactgggatgccaaggagagaatcttccggaac
ttcggaaacctgatgggaccgctggaggagccggtgggaatgcagaagtgggccaaaggg
gcaaacgtaacggtgactgtcgtgtggatcgaccccactaacgtgatcgccgccacctac
gacgtcctgatcgactccggagcggagttcacccactacagacccccgctgaacacgccg
ctgcggccgggcatgtggaccgtacgagtgctgcaccactggagccccatggcagagacg
cgcttccttatcacgccgctcacgcactataaacaccagcctattcgccaagaggacgcc
ttgaaggtgcacaacggaccagccaaaaacagctacatggagcaaagcttccacggcctg
aaccccatcctgaacatcccggtccatttaggtcaagtggaggaggctaagctgaacgcc
ggactgaccggggcgcgactggagcgctgggtggacagcctggtggcggaggtgtgggcg
gcggcggacgtttgcgcggcgacgccctccggctgtccggtcctgcaggcgtgcagggag
acgtcctggagctcgctcagtcccgacccgaaatctcagatgggctccacaaaagccaac
ggtaccatcaggtag
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