Trichomycterus rosablanca: 134336295
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Entry
134336295 CDS
T09921
Symbol
ush1ga
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134336295 (ush1ga)
Cilium and associated proteins [BR:
trn03037
]
Primary cilia and associated proteins
USH complex and associated proteins
134336295 (ush1ga)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
134336295
NCBI-ProteinID:
XP_062875092
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Position
22:complement(5259389..5267128)
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AA seq
477 aa
AA seq
DB search
MNDKYHRAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLDALRLIVARGGNPDK
CDIWGNTPLHLAAANGHLNCLSFLVSFGANTWCLDNDYHTPLDMAATKNHMDCVRYLDSI
AAKQTALNPKLVAKLKDRAFRDAERRIKDCVKMQRKHHRRMERKFQKEATEASFSDAMSF
SSYTSSTLSRKLHPFNTATSVPYSQATLHATARGKTKIQKKLEKKKQGDGTFKIYEEGRK
SVRSLSGLQLGNDVMFLKQGTYVNTKDRGRRNIRDMFPRDNEDAISRAMSEPDLHGPDMD
HSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGLFGLGTRDEGSVAGSVAGSGRSPNVRLR
SRLQRSPIMDEDSIGSARSLQARNMQELPWEEVELGLDDDDEPESSPLEVFLAAHGMNEF
TPIFKREMIDLEALLLCSDKDLKGIHIPLGPRKKIIDACKRHLETIEDPECIEDTEL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataagtaccacagggcagcgcgggatggctacctggacctgctcaaagaggcc
acacgcaaggacctgaacgcgccggatgaagatggcatgacaccgacgctatgggccgct
taccacggtaacctggacgcgctgaggctcatcgtagccagaggagggaatcctgataag
tgtgacatatgggggaacacaccgctccacctagctgctgccaacggccatctcaactgc
ctgtctttcttagtgtcgtttggtgcaaatacatggtgcctagacaatgactaccacaca
cccctggacatggctgccaccaagaaccacatggactgtgtgcgctacctggactcaatc
gctgccaagcagacagctctcaatcccaaactggtggccaagttgaaagaccgggccttc
cgtgatgccgagcgccgcatcaaagactgtgtcaagatgcagcgcaagcaccaccgtcgc
atggagcgcaagttccaaaaggaagccacagaagcttcgttttccgatgccatgagcttc
tctagctacaccagcagcacactcagtcgcaagctgcaccccttcaacactgccaccagt
gtgccatattctcaggctacccttcatgccactgccaggggcaagacaaagatccagaag
aagctggaaaagaagaagcaaggcgacgggaccttcaaaatctatgaagaaggaaggaag
agcgtccgctctctttctggtctacagctgggcaatgacgtcatgttcctaaagcaaggc
acctacgtgaataccaaagaccgtggtcgacgtaatattcgcgacatgttcccacgggac
aatgaagacgccatctcacgtgccatgagcgagccagacctgcacgggccagacatggac
cactctgagatcagcacagactcaggccatgactcgctttttaaccgcccaggcctgggt
actatggtgtttcgacgaaactatgtaagtgggggactctttggcctcggcactcgggat
gagggcagtgtggcgggcagtgtggcgggcagcgggcggtcacccaacgtgcgtctgcgc
agccggctgcaacgatctcctattatggatgaggacagtattggcagtgcccggagcctt
caggcaagaaatatgcaagagcttccctgggaagaggtggaattaggattggatgatgat
gatgagccagagagcagcccgctggaggtgtttttggctgctcacggcatgaatgagttc
acccctatctttaaacgggagatgattgatctggaagcactgttgctgtgctcggataag
gatcttaagggcatccacattcccctgggaccccgcaagaagataatcgatgcctgcaag
aggcacctagagaccattgaggatcctgagtgtatagaagacacagagttatag
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