Thermomicrobium roseum: trd_0061
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Entry
trd_0061 CDS
T00845
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tro
Thermomicrobium roseum
Pathway
tro00470
D-Amino acid metabolism
tro00550
Peptidoglycan biosynthesis
tro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
trd_0061 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
trd_0061 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
trd_0061 (murD)
Enzymes [BR:
tro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
trd_0061 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
Precursor biosynthesis
Amino acid ligase
trd_0061 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
CoA_binding_2
PALP
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ACM06380
UniProt:
B9L279
LinkDB
All DBs
Position
69613..71022
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AA seq
469 aa
AA seq
DB search
MGDRAPLDLRGKAVLVMGLGTRSGGLGVTRWLVEQGAEVTVTDLRTAEQLAPSLRALAGL
PVRLVLGEHRREDFERAEIVVRNPAVPRESPWLALARAAGARIEMEMTLFFRACPAPIVG
VTGTKGKTTTATLCAAILRQWRPDTVLAGNLGRSALETLPGIQPDTPVVLELSSWQLEGL
DEHGLSPHIAVLTSISPDHLDRYPSFEAYIDAKRAIARHQRPGDWFVVNRDDPVAWACRD
AGCGKVVPFGRDDGVSDGAFWRDDRLIWRWGGEEQDLLRRSDFPLMGEHAVGNALAAAAA
ALLRGASPAHVAAALREAEPVPHRLEHVARLGTVDFVNDSAATAPAAVLAALATFRERPI
VLIGGGAAKGVSLAELAEAVARQVRAVVLLDGTATPDYQAALRAAGARVEGPYQSMEEAV
RRAAELAEPGAVVLLSPGCASFGLFRDEFHRGESFREAVRQLVRERGGD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcgcgcgccgctcgaccttcgcggtaaagctgtcctggtgatggggctggga
acacgctcgggtggtctgggcgtcacacgctggctggtcgagcagggagcggaggtgacg
gtcaccgatctccgcacggccgaacaactcgcgccgagcctgcgcgcactcgctggcttg
ccggtacggctcgtcctgggggaacaccggcgcgaggacttcgagcgagccgagatcgtg
gtgcgcaatccggcggtgccgcgcgagtctccctggctggctctcgcccgtgctgccgga
gcgcggatcgagatggagatgacgctgttctttcgcgcctgcccggctccgatcgtcggc
gtcaccggcaccaagggcaagacgacgaccgcgacgctctgcgcagctattctccggcaa
tggcgaccggacacggtgctggctgggaacctggggcgctcagcgctggaaaccttgccg
ggaatccagccggacacgccggtggtgttggaactctcgagctggcaactggaggggctc
gacgagcatggcttgagtccccatatcgcagtgctcacctcgatctcacccgatcacctc
gatcggtatccctccttcgaggcgtacatcgacgccaagcgcgcgatcgctcgtcaccag
cggccgggcgattggttcgtcgtgaaccgcgacgatccggtcgcttgggcctgccgggat
gctggctgcgggaaggtggtccccttcgggcgcgatgacggggtgagcgacggtgctttc
tggcgcgacgatcgcctgatctggcgctggggaggcgaagagcaggacctgctgcgccgg
agtgacttccccctgatgggggagcatgcggtcggcaatgcgctcgccgcggccgctgca
gcgctgctgcgtggtgccagccccgcgcacgtcgcggcagcgttgcgcgaagccgagccg
gtgccgcatcgcttggagcatgtcgcgcgtttgggcacggtcgacttcgtcaacgactcg
gctgcgactgcgccggctgcggtcttagccgcattggcgaccttccgggagcggccgatc
gttctcatcggtggaggggcagccaaaggagtttcgctcgccgagttggctgaggcagtc
gcgcgacaggtgcgcgcggtcgtgctgctggacggcaccgcgacgcccgattaccaggca
gcactgcgagcggcgggtgcgcgagtggagggaccctaccagtcgatggaagaggcggtg
cgccgggcagcggaacttgccgagccgggtgcggtcgtcctcctttcgccgggctgcgcc
agcttcgggctgttccgggacgagttccatcgaggcgaatcgttccgcgaagcggtgcgg
caactcgtccgcgagcgcggaggtgactga
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